EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00011032 (Gene tree)
Gene ID: -
Gene Symbol: R05D11.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 2266 bases
Position: chrI:8598658-8600923
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
R05D11	ResIII	PF04851.15	6.8e-07	1	1
R05D11	ResIII	PF04851.15	6.8e-07	1	1
R05D11	DEAD	PF00270.29	7.7e-35	1	1
R05D11	DEAD	PF00270.29	7.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
R05D11.4.1	-	1888	NM_059925	R05D11.4.1	581 (aa)	NP_492326	Q21736
R05D11.4.2	-	1936	NM_059925	R05D11.4.2	581 (aa)	NP_492326	Q21736

Gene Model

Click here to download WBGene00011032's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00011032's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00011032	R05D11.4	62	32.468	WBGene00021938	Y55F3BR.1	62	32.468
WBGene00011032	R05D11.4	66	31.990	WBGene00021277	Y23H5B.6	52	31.387
WBGene00011032	R05D11.4	67	32.854	WBGene00002244	laf-1	63	32.143
WBGene00011032	R05D11.4	64	30.591	WBGene00013214	Y54G11A.3	76	30.617
WBGene00011032	R05D11.4	67	31.296	WBGene00006888	vbh-1	63	31.159
WBGene00011032	R05D11.4	68	31.540	WBGene00018776	F53H1.1	53	31.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00011032	R05D11.4	96	38.235	ENSG00000278053	DDX52	89	39.474	Homo_sapiens
WBGene00011032	R05D11.4	82	41.400	ENSAPOG00000008759	ddx52	61	43.596	Acanthochromis_polyacanthus
WBGene00011032	R05D11.4	85	40.000	ENSAMEG00000013159	DDX52	87	39.706	Ailuropoda_melanoleuca
WBGene00011032	R05D11.4	71	43.590	ENSACIG00000002843	ddx52	74	43.590	Amphilophus_citrinellus
WBGene00011032	R05D11.4	83	41.865	ENSAOCG00000000356	-	61	43.596	Amphiprion_ocellaris
WBGene00011032	R05D11.4	83	41.865	ENSAOCG00000007983	ddx52	66	44.928	Amphiprion_ocellaris
WBGene00011032	R05D11.4	83	41.865	ENSAPEG00000023456	ddx52	61	43.596	Amphiprion_percula
WBGene00011032	R05D11.4	86	41.040	ENSATEG00000021525	ddx52	65	42.581	Anabas_testudineus
WBGene00011032	R05D11.4	83	39.200	ENSACAG00000006395	DDX52	87	40.430	Anolis_carolinensis
WBGene00011032	R05D11.4	96	38.038	ENSANAG00000028587	DDX52	90	37.805	Aotus_nancymaae
WBGene00011032	R05D11.4	80	41.372	ENSACLG00000021447	ddx52	68	43.049	Astatotilapia_calliptera
WBGene00011032	R05D11.4	74	42.478	ENSAMXG00000024377	ddx52	70	42.478	Astyanax_mexicanus
WBGene00011032	R05D11.4	71	43.387	ENSBTAG00000010313	DDX52	76	41.826	Bos_taurus
WBGene00011032	R05D11.4	96	38.128	ENSCJAG00000015190	DDX52	90	38.004	Callithrix_jacchus
WBGene00011032	R05D11.4	96	38.488	ENSCAFG00000018145	-	87	39.706	Canis_familiaris
WBGene00011032	R05D11.4	96	38.488	ENSCAFG00000013554	-	87	39.522	Canis_familiaris
WBGene00011032	R05D11.4	85	40.077	ENSCAFG00020003753	DDX52	88	39.706	Canis_lupus_dingo
WBGene00011032	R05D11.4	81	40.319	ENSCHIG00000006275	DDX52	78	42.038	Capra_hircus
WBGene00011032	R05D11.4	94	38.879	ENSTSYG00000002996	DDX52	87	39.162	Carlito_syrichta
WBGene00011032	R05D11.4	85	33.595	ENSCAPG00000010436	DDX52	83	33.906	Cavia_aperea
WBGene00011032	R05D11.4	85	40.381	ENSCPOG00000001232	DDX52	76	41.915	Cavia_porcellus
WBGene00011032	R05D11.4	85	40.000	ENSCCAG00000023213	DDX52	87	39.444	Cebus_capucinus
WBGene00011032	R05D11.4	96	38.062	ENSCATG00000041437	DDX52	90	37.937	Cercocebus_atys
WBGene00011032	R05D11.4	85	39.884	ENSCLAG00000016292	DDX52	87	39.706	Chinchilla_lanigera
WBGene00011032	R05D11.4	96	38.316	ENSCSAG00000006122	DDX52	90	38.021	Chlorocebus_sabaeus
WBGene00011032	R05D11.4	76	41.102	ENSCPBG00000009806	DDX52	71	41.685	Chrysemys_picta_bellii
WBGene00011032	R05D11.4	75	40.812	ENSCING00000016218	-	93	41.447	Ciona_intestinalis
WBGene00011032	R05D11.4	67	45.750	ENSCSAVG00000003835	-	96	45.750	Ciona_savignyi
WBGene00011032	R05D11.4	96	38.408	ENSCANG00000035140	DDX52	90	38.287	Colobus_angolensis_palliatus
WBGene00011032	R05D11.4	71	44.084	ENSCGRG00001020695	Ddx52	75	42.765	Cricetulus_griseus_chok1gshd
WBGene00011032	R05D11.4	71	44.084	ENSCGRG00000008830	Ddx52	75	42.765	Cricetulus_griseus_crigri
WBGene00011032	R05D11.4	87	40.038	ENSCSEG00000010008	ddx52	67	41.578	Cynoglossus_semilaevis
WBGene00011032	R05D11.4	74	43.498	ENSCVAG00000005302	ddx52	73	43.498	Cyprinodon_variegatus
WBGene00011032	R05D11.4	74	41.814	ENSDARG00000100505	ddx52	72	41.814	Danio_rerio
WBGene00011032	R05D11.4	80	40.644	ENSDNOG00000047454	DDX52	73	42.763	Dasypus_novemcinctus
WBGene00011032	R05D11.4	74	43.371	ENSDORG00000004276	Ddx52	76	42.340	Dipodomys_ordii
WBGene00011032	R05D11.4	85	39.272	FBgn0036754	CG5589	75	41.558	Drosophila_melanogaster
WBGene00011032	R05D11.4	69	40.385	ENSETEG00000016042	DDX52	87	37.009	Echinops_telfairi
WBGene00011032	R05D11.4	68	33.875	ENSEBUG00000010838	-	94	34.783	Eptatretus_burgeri
WBGene00011032	R05D11.4	92	38.801	ENSEASG00005011275	DDX52	70	41.614	Equus_asinus_asinus
WBGene00011032	R05D11.4	97	40.307	ENSECAG00000012286	DDX52	86	39.761	Equus_caballus
WBGene00011032	R05D11.4	71	43.349	ENSELUG00000018002	ddx52	75	43.349	Esox_lucius
WBGene00011032	R05D11.4	91	39.572	ENSFCAG00000010573	DDX52	87	39.338	Felis_catus
WBGene00011032	R05D11.4	72	43.119	ENSFALG00000005155	DDX52	73	42.511	Ficedula_albicollis
WBGene00011032	R05D11.4	85	40.000	ENSFDAG00000008340	-	86	39.444	Fukomys_damarensis
WBGene00011032	R05D11.4	78	37.006	ENSFDAG00000011133	-	75	37.234	Fukomys_damarensis
WBGene00011032	R05D11.4	82	41.317	ENSFHEG00000017239	ddx52	73	41.463	Fundulus_heteroclitus
WBGene00011032	R05D11.4	76	42.299	ENSGMOG00000014879	ddx52	79	43.142	Gadus_morhua
WBGene00011032	R05D11.4	85	40.344	ENSGALG00000005489	DDX52	74	42.857	Gallus_gallus
WBGene00011032	R05D11.4	81	42.363	ENSGAFG00000000702	ddx52	68	43.596	Gambusia_affinis
WBGene00011032	R05D11.4	80	42.171	ENSGACG00000020624	ddx52	91	43.722	Gasterosteus_aculeatus
WBGene00011032	R05D11.4	73	42.369	ENSGAGG00000007234	DDX52	71	41.469	Gopherus_agassizii
WBGene00011032	R05D11.4	96	38.235	ENSGGOG00000028224	DDX52	90	37.937	Gorilla_gorilla
WBGene00011032	R05D11.4	82	41.517	ENSHBUG00000015638	ddx52	63	43.371	Haplochromis_burtoni
WBGene00011032	R05D11.4	85	40.077	ENSHGLG00000006235	-	88	39.890	Heterocephalus_glaber_female
WBGene00011032	R05D11.4	81	33.684	ENSHGLG00000019205	-	80	34.694	Heterocephalus_glaber_female
WBGene00011032	R05D11.4	69	44.019	ENSHGLG00100013765	-	80	43.341	Heterocephalus_glaber_male
WBGene00011032	R05D11.4	81	33.684	ENSHGLG00100018699	-	81	34.694	Heterocephalus_glaber_male
WBGene00011032	R05D11.4	80	41.286	ENSHCOG00000007966	ddx52	79	43.267	Hippocampus_comes
WBGene00011032	R05D11.4	78	42.562	ENSIPUG00000008623	ddx52	72	43.668	Ictalurus_punctatus
WBGene00011032	R05D11.4	79	41.176	ENSJJAG00000021877	Ddx52	75	42.060	Jaculus_jaculus
WBGene00011032	R05D11.4	87	38.219	ENSKMAG00000022270	ddx52	92	44.872	Kryptolebias_marmoratus
WBGene00011032	R05D11.4	80	42.062	ENSLBEG00000015403	ddx52	64	43.596	Labrus_bergylta
WBGene00011032	R05D11.4	76	41.087	ENSLACG00000012514	DDX52	72	41.176	Latimeria_chalumnae
WBGene00011032	R05D11.4	54	39.298	ENSLOCG00000005928	ddx52	70	39.298	Lepisosteus_oculatus
WBGene00011032	R05D11.4	77	41.631	ENSLAFG00000002635	DDX52	94	46.194	Loxodonta_africana
WBGene00011032	R05D11.4	96	38.062	ENSMFAG00000000640	DDX52	90	37.937	Macaca_fascicularis
WBGene00011032	R05D11.4	96	38.062	ENSMMUG00000002980	DDX52	90	37.937	Macaca_mulatta
WBGene00011032	R05D11.4	96	38.235	ENSMNEG00000043658	DDX52	90	38.112	Macaca_nemestrina
WBGene00011032	R05D11.4	93	38.612	ENSMLEG00000017518	DDX52	86	38.309	Mandrillus_leucophaeus
WBGene00011032	R05D11.4	86	40.875	ENSMAMG00000019719	ddx52	66	42.644	Mastacembelus_armatus
WBGene00011032	R05D11.4	82	41.517	ENSMZEG00005019044	ddx52	63	43.146	Maylandia_zebra
WBGene00011032	R05D11.4	73	43.018	ENSMGAG00000008091	DDX52	78	42.424	Meleagris_gallopavo
WBGene00011032	R05D11.4	69	44.630	ENSMAUG00000021084	Ddx52	79	41.580	Mesocricetus_auratus
WBGene00011032	R05D11.4	85	36.311	ENSMICG00000004290	-	88	35.963	Microcebus_murinus
WBGene00011032	R05D11.4	71	43.852	ENSMOCG00000009654	Ddx52	75	42.549	Microtus_ochrogaster
WBGene00011032	R05D11.4	82	40.594	ENSMMOG00000018825	ddx52	70	42.601	Mola_mola
WBGene00011032	R05D11.4	75	42.920	ENSMODG00000002493	DDX52	75	42.463	Monodelphis_domestica
WBGene00011032	R05D11.4	85	40.577	ENSMALG00000007621	ddx52	76	42.060	Monopterus_albus
WBGene00011032	R05D11.4	71	43.852	MGP_CAROLIEiJ_G0016888	Ddx52	73	43.297	Mus_caroli
WBGene00011032	R05D11.4	71	43.852	ENSMUSG00000020677	Ddx52	73	43.297	Mus_musculus
WBGene00011032	R05D11.4	71	44.316	MGP_PahariEiJ_G0018018	Ddx52	74	43.421	Mus_pahari
WBGene00011032	R05D11.4	71	44.084	MGP_SPRETEiJ_G0017733	Ddx52	73	43.516	Mus_spretus
WBGene00011032	R05D11.4	80	41.082	ENSMPUG00000015007	DDX52	73	42.763	Mustela_putorius_furo
WBGene00011032	R05D11.4	78	41.408	ENSMLUG00000007167	-	76	42.251	Myotis_lucifugus
WBGene00011032	R05D11.4	77	41.328	ENSMLUG00000024480	-	92	42.038	Myotis_lucifugus
WBGene00011032	R05D11.4	71	43.852	ENSNGAG00000020686	Ddx52	75	42.765	Nannospalax_galili
WBGene00011032	R05D11.4	75	42.731	ENSNBRG00000007750	ddx52	77	43.274	Neolamprologus_brichardi
WBGene00011032	R05D11.4	85	39.845	ENSNLEG00000002826	DDX52	75	42.275	Nomascus_leucogenys
WBGene00011032	R05D11.4	60	46.409	ENSMEUG00000011234	DDX52	91	45.789	Notamacropus_eugenii
WBGene00011032	R05D11.4	73	34.910	ENSOPRG00000003899	DDX52	87	32.965	Ochotona_princeps
WBGene00011032	R05D11.4	85	39.961	ENSODEG00000012814	-	89	39.591	Octodon_degus
WBGene00011032	R05D11.4	87	40.344	ENSODEG00000002857	-	94	39.964	Octodon_degus
WBGene00011032	R05D11.4	79	41.875	ENSONIG00000004869	ddx52	69	43.371	Oreochromis_niloticus
WBGene00011032	R05D11.4	80	41.529	ENSOANG00000007133	DDX52	75	42.151	Ornithorhynchus_anatinus
WBGene00011032	R05D11.4	73	42.955	ENSOCUG00000014532	DDX52	75	42.151	Oryctolagus_cuniculus
WBGene00011032	R05D11.4	84	40.631	ENSORLG00000005241	ddx52	69	41.957	Oryzias_latipes
WBGene00011032	R05D11.4	81	41.582	ENSORLG00015015546	ddx52	66	41.957	Oryzias_latipes_hsok
WBGene00011032	R05D11.4	81	42.424	ENSOMEG00000017602	ddx52	67	42.609	Oryzias_melastigma
WBGene00011032	R05D11.4	75	40.879	ENSOGAG00000000868	DDX52	77	40.127	Otolemur_garnettii
WBGene00011032	R05D11.4	81	40.200	ENSOARG00000002998	DDX52	76	42.038	Ovis_aries
WBGene00011032	R05D11.4	96	38.408	ENSPPAG00000028453	DDX52	90	38.112	Pan_paniscus
WBGene00011032	R05D11.4	89	39.709	ENSPPRG00000009742	DDX52	86	39.259	Panthera_pardus
WBGene00011032	R05D11.4	89	39.709	ENSPTIG00000013697	DDX52	86	39.259	Panthera_tigris_altaica
WBGene00011032	R05D11.4	96	38.062	ENSPTRG00000009058	DDX52	90	37.762	Pan_troglodytes
WBGene00011032	R05D11.4	96	38.062	ENSPANG00000022101	DDX52	90	37.937	Papio_anubis
WBGene00011032	R05D11.4	78	41.702	ENSPKIG00000013058	ddx52	74	43.213	Paramormyrops_kingsleyae
WBGene00011032	R05D11.4	73	41.913	ENSPSIG00000010226	DDX52	76	40.340	Pelodiscus_sinensis
WBGene00011032	R05D11.4	74	42.697	ENSPMGG00000005458	ddx52	86	42.697	Periophthalmus_magnuspinnatus
WBGene00011032	R05D11.4	71	43.619	ENSPEMG00000003263	Ddx52	75	42.333	Peromyscus_maniculatus_bairdii
WBGene00011032	R05D11.4	87	39.360	ENSPCIG00000017730	DDX52	68	41.915	Phascolarctos_cinereus
WBGene00011032	R05D11.4	74	43.274	ENSPFOG00000018378	ddx52	66	43.371	Poecilia_formosa
WBGene00011032	R05D11.4	74	43.274	ENSPLAG00000008368	ddx52	66	43.371	Poecilia_latipinna
WBGene00011032	R05D11.4	74	43.274	ENSPMEG00000002359	ddx52	66	43.371	Poecilia_mexicana
WBGene00011032	R05D11.4	95	37.148	ENSPREG00000016874	ddx52	66	42.921	Poecilia_reticulata
WBGene00011032	R05D11.4	84	40.675	ENSPPYG00000008221	DDX52	78	40.644	Pongo_abelii
WBGene00011032	R05D11.4	58	46.705	ENSPCAG00000005814	DDX52	56	46.705	Procavia_capensis
WBGene00011032	R05D11.4	96	38.462	ENSPVAG00000010462	DDX52	87	39.488	Pteropus_vampyrus
WBGene00011032	R05D11.4	76	42.544	ENSPNYG00000020730	ddx52	77	43.049	Pundamilia_nyererei
WBGene00011032	R05D11.4	74	43.142	ENSPNAG00000014707	ddx52	70	43.142	Pygocentrus_nattereri
WBGene00011032	R05D11.4	69	45.107	ENSRNOG00000002612	Ddx52	75	42.918	Rattus_norvegicus
WBGene00011032	R05D11.4	96	36.427	ENSRBIG00000032462	DDX52	90	36.283	Rhinopithecus_bieti
WBGene00011032	R05D11.4	96	35.211	ENSRROG00000034760	DDX52	90	34.875	Rhinopithecus_roxellana
WBGene00011032	R05D11.4	95	33.277	YGL171W	-	71	38.061	Saccharomyces_cerevisiae
WBGene00011032	R05D11.4	85	39.768	ENSSBOG00000035787	DDX52	87	39.411	Saimiri_boliviensis_boliviensis
WBGene00011032	R05D11.4	86	38.419	ENSSHAG00000013962	DDX52	73	41.702	Sarcophilus_harrisii
WBGene00011032	R05D11.4	72	42.534	ENSSFOG00015005055	ddx52	82	40.501	Scleropages_formosus
WBGene00011032	R05D11.4	81	41.273	ENSSMAG00000009788	ddx52	64	43.371	Scophthalmus_maximus
WBGene00011032	R05D11.4	77	41.845	ENSSDUG00000004022	ddx52	68	41.935	Seriola_dumerili
WBGene00011032	R05D11.4	83	40.080	ENSSLDG00000016999	ddx52	78	41.558	Seriola_lalandi_dorsalis
WBGene00011032	R05D11.4	71	41.667	ENSSPUG00000000720	DDX52	68	41.111	Sphenodon_punctatus
WBGene00011032	R05D11.4	82	40.705	ENSSPAG00000014211	ddx52	61	44.170	Stegastes_partitus
WBGene00011032	R05D11.4	94	38.407	ENSSSCG00000021275	DDX52	86	39.706	Sus_scrofa
WBGene00011032	R05D11.4	72	42.661	ENSTGUG00000008303	-	76	42.070	Taeniopygia_guttata
WBGene00011032	R05D11.4	81	42.200	ENSTRUG00000017071	ddx52	62	43.665	Takifugu_rubripes
WBGene00011032	R05D11.4	77	42.151	ENSTNIG00000009990	ddx52	73	42.825	Tetraodon_nigroviridis
WBGene00011032	R05D11.4	68	31.878	ENSTBEG00000005982	DDX52	64	32.314	Tupaia_belangeri
WBGene00011032	R05D11.4	92	39.007	ENSTTRG00000008917	DDX52	90	37.262	Tursiops_truncatus
WBGene00011032	R05D11.4	80	41.164	ENSVPAG00000001979	DDX52	76	41.189	Vicugna_pacos
WBGene00011032	R05D11.4	91	39.750	ENSVVUG00000020209	DDX52	88	42.038	Vulpes_vulpes
WBGene00011032	R05D11.4	79	38.866	ENSXETG00000025903	ddx52	76	39.440	Xenopus_tropicalis
WBGene00011032	R05D11.4	82	41.483	ENSXMAG00000010805	ddx52	65	43.371	Xiphophorus_maculatus