EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00011109 (Gene tree)
Gene ID: -
Gene Symbol: R07E5.1
Alias: -
Full Name: G patch domain-containing protein 1 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3599 bases
Position: chrIII:4408551-4412149
Accession: Q21827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
R07E5	DUF1604	PF07713.13	3.6e-33	1	1
R07E5	G-patch	PF01585.23	3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
R07E5.1	-	2488	NM_065492	R07E5.1	812 (aa)	NP_497893	Q21827

Gene Model

Click here to download WBGene00011109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00011109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00011109	R07E5.1	78	30.388	ENSG00000076650	GPATCH1	70	52.747	Homo_sapiens
WBGene00011109	R07E5.1	76	31.199	ENSAMEG00000015575	GPATCH1	70	31.004	Ailuropoda_melanoleuca
WBGene00011109	R07E5.1	50	58.824	ENSATEG00000014494	gpatch1	56	33.117	Anabas_testudineus
WBGene00011109	R07E5.1	66	31.447	ENSAPLG00000007584	GPATCH1	68	31.447	Anas_platyrhynchos
WBGene00011109	R07E5.1	76	30.548	ENSBTAG00000000721	GPATCH1	69	30.511	Bos_taurus
WBGene00011109	R07E5.1	68	31.024	ENSCPOG00000024477	GPATCH1	68	30.967	Cavia_porcellus
WBGene00011109	R07E5.1	76	30.464	ENSCATG00000043637	GPATCH1	70	52.747	Cercocebus_atys
WBGene00011109	R07E5.1	76	30.536	ENSCSAG00000004743	GPATCH1	69	30.758	Chlorocebus_sabaeus
WBGene00011109	R07E5.1	60	30.682	ENSCHOG00000012865	GPATCH1	59	30.682	Choloepus_hoffmanni
WBGene00011109	R07E5.1	67	30.757	ENSCING00000012518	-	72	30.111	Ciona_intestinalis
WBGene00011109	R07E5.1	66	30.016	ENSCGRG00001016736	Gpatch1	68	30.016	Cricetulus_griseus_chok1gshd
WBGene00011109	R07E5.1	50	45.882	ENSCSEG00000019456	-	56	58.333	Cynoglossus_semilaevis
WBGene00011109	R07E5.1	71	30.391	ENSDNOG00000005291	GPATCH1	73	30.131	Dasypus_novemcinctus
WBGene00011109	R07E5.1	68	31.108	ENSEASG00005021162	GPATCH1	74	30.547	Equus_asinus_asinus
WBGene00011109	R07E5.1	68	31.108	ENSECAG00000022743	GPATCH1	66	30.687	Equus_caballus
WBGene00011109	R07E5.1	68	30.758	ENSFALG00000007821	GPATCH1	68	31.175	Ficedula_albicollis
WBGene00011109	R07E5.1	66	30.901	ENSFDAG00000003871	GPATCH1	70	30.901	Fukomys_damarensis
WBGene00011109	R07E5.1	76	30.387	ENSGALG00000004839	GPATCH1	71	30.758	Gallus_gallus
WBGene00011109	R07E5.1	74	30.154	ENSGGOG00000010862	GPATCH1	70	30.240	Gorilla_gorilla
WBGene00011109	R07E5.1	68	31.763	ENSHGLG00000009334	GPATCH1	69	31.142	Heterocephalus_glaber_female
WBGene00011109	R07E5.1	68	31.611	ENSHGLG00100018074	GPATCH1	68	31.467	Heterocephalus_glaber_male
WBGene00011109	R07E5.1	68	30.441	ENSSTOG00000003720	GPATCH1	68	30.441	Ictidomys_tridecemlineatus
WBGene00011109	R07E5.1	68	30.046	ENSJJAG00000023765	Gpatch1	68	30.046	Jaculus_jaculus
WBGene00011109	R07E5.1	69	30.325	ENSKMAG00000017950	gpatch1	68	30.963	Kryptolebias_marmoratus
WBGene00011109	R07E5.1	68	30.653	ENSLOCG00000001800	gpatch1	67	30.382	Lepisosteus_oculatus
WBGene00011109	R07E5.1	76	30.464	ENSMFAG00000034418	GPATCH1	70	52.747	Macaca_fascicularis
WBGene00011109	R07E5.1	76	30.328	ENSMMUG00000011790	GPATCH1	70	52.747	Macaca_mulatta
WBGene00011109	R07E5.1	74	30.252	ENSMNEG00000045084	GPATCH1	70	50.549	Macaca_nemestrina
WBGene00011109	R07E5.1	72	30.504	ENSMGAG00000005775	GPATCH1	69	30.428	Meleagris_gallopavo
WBGene00011109	R07E5.1	68	31.476	ENSMOCG00000000174	Gpatch1	68	31.476	Microtus_ochrogaster
WBGene00011109	R07E5.1	68	30.840	ENSMODG00000012226	GPATCH1	69	30.689	Monodelphis_domestica
WBGene00011109	R07E5.1	68	30.317	MGP_PahariEiJ_G0012816	Gpatch1	71	57.143	Mus_pahari
WBGene00011109	R07E5.1	71	30.511	ENSMLUG00000012161	GPATCH1	70	30.556	Myotis_lucifugus
WBGene00011109	R07E5.1	71	30.479	ENSNLEG00000007659	GPATCH1	70	52.747	Nomascus_leucogenys
WBGene00011109	R07E5.1	68	30.211	ENSOANG00000012732	GPATCH1	68	30.956	Ornithorhynchus_anatinus
WBGene00011109	R07E5.1	62	33.544	ENSOMEG00000022688	gpatch1	51	62.745	Oryzias_melastigma
WBGene00011109	R07E5.1	76	30.917	ENSOARG00000004365	GPATCH1	72	30.367	Ovis_aries
WBGene00011109	R07E5.1	71	30.479	ENSPANG00000012374	GPATCH1	70	52.747	Papio_anubis
WBGene00011109	R07E5.1	68	30.076	ENSPSIG00000013433	GPATCH1	68	30.734	Pelodiscus_sinensis
WBGene00011109	R07E5.1	68	30.816	ENSPEMG00000000636	Gpatch1	68	30.699	Peromyscus_maniculatus_bairdii
WBGene00011109	R07E5.1	68	31.050	ENSPCIG00000021003	GPATCH1	72	30.572	Phascolarctos_cinereus
WBGene00011109	R07E5.1	69	30.746	ENSPCOG00000009674	GPATCH1	77	30.330	Propithecus_coquereli
WBGene00011109	R07E5.1	77	30.286	ENSRNOG00000011584	Gpatch1	68	30.606	Rattus_norvegicus
WBGene00011109	R07E5.1	71	30.624	ENSRROG00000024428	GPATCH1	70	52.747	Rhinopithecus_roxellana
WBGene00011109	R07E5.1	71	30.803	ENSSBOG00000034650	GPATCH1	70	30.466	Saimiri_boliviensis_boliviensis
WBGene00011109	R07E5.1	71	30.422	ENSSHAG00000016016	GPATCH1	70	30.657	Sarcophilus_harrisii
WBGene00011109	R07E5.1	53	44.828	ENSSFOG00015011535	gpatch1	53	44.828	Scleropages_formosus
WBGene00011109	R07E5.1	61	34.000	ENSSMAG00000002883	gpatch1	57	34.000	Scophthalmus_maximus
WBGene00011109	R07E5.1	57	33.423	ENSSLDG00000002856	gpatch1	54	58.824	Seriola_lalandi_dorsalis
WBGene00011109	R07E5.1	68	30.781	ENSSARG00000004108	GPATCH1	68	30.441	Sorex_araneus
WBGene00011109	R07E5.1	76	30.041	ENSSSCG00000002865	GPATCH1	70	30.816	Sus_scrofa
WBGene00011109	R07E5.1	68	30.840	ENSTGUG00000009401	GPATCH1	69	31.555	Taeniopygia_guttata
WBGene00011109	R07E5.1	51	58.824	ENSTNIG00000002554	gpatch1	81	30.275	Tetraodon_nigroviridis
WBGene00011109	R07E5.1	68	37.131	ENSTTRG00000012221	GPATCH1	61	37.131	Tursiops_truncatus
WBGene00011109	R07E5.1	68	31.071	ENSUMAG00000014645	GPATCH1	70	52.809	Ursus_maritimus
WBGene00011109	R07E5.1	57	42.945	ENSVPAG00000010313	GPATCH1	62	42.197	Vicugna_pacos