EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00011247 (Gene tree)
Gene ID: -
Gene Symbol: mrpl-49
Alias: -
Full Name: Probable 39S ribosomal protein L49%2C mitochondrial
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 786 bases
Position: chrV:12728631-12729416
Accession: Q21939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
R11D1	Img2	PF05046.14	2.1e-17	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
R11D1.9	-	652	NM_073778	R11D1.9	187 (aa)	NP_506179	Q21939

Gene Model

Click here to download WBGene00011247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00011247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00011247	mrpl-49	89	31.325	ENSG00000149792	MRPL49	92	31.325	Homo_sapiens
WBGene00011247	mrpl-49	81	33.113	ENSAPOG00000017939	MRPL49	78	33.113	Acanthochromis_polyacanthus
WBGene00011247	mrpl-49	71	32.331	ENSAMEG00000017672	MRPL49	74	32.331	Ailuropoda_melanoleuca
WBGene00011247	mrpl-49	81	36.424	ENSACIG00000006080	MRPL49	84	36.424	Amphilophus_citrinellus
WBGene00011247	mrpl-49	81	33.113	ENSAOCG00000018785	MRPL49	78	33.113	Amphiprion_ocellaris
WBGene00011247	mrpl-49	81	33.113	ENSAPEG00000017747	MRPL49	78	33.113	Amphiprion_percula
WBGene00011247	mrpl-49	81	35.762	ENSATEG00000023045	MRPL49	78	35.762	Anabas_testudineus
WBGene00011247	mrpl-49	74	33.094	ENSACAG00000010808	MRPL49	96	33.094	Anolis_carolinensis
WBGene00011247	mrpl-49	71	34.586	ENSANAG00000034865	MRPL49	74	34.586	Aotus_nancymaae
WBGene00011247	mrpl-49	81	37.086	ENSACLG00000009050	MRPL49	80	37.086	Astatotilapia_calliptera
WBGene00011247	mrpl-49	75	36.879	ENSAMXG00000003487	MRPL49	76	36.879	Astyanax_mexicanus
WBGene00011247	mrpl-49	81	33.113	ENSBTAG00000005075	MRPL49	84	33.113	Bos_taurus
WBGene00011247	mrpl-49	71	34.586	ENSCJAG00000043917	MRPL49	74	34.586	Callithrix_jacchus
WBGene00011247	mrpl-49	71	32.331	ENSCAFG00000013928	MRPL49	74	32.331	Canis_familiaris
WBGene00011247	mrpl-49	82	30.061	ENSCAFG00020014941	MRPL49	93	30.061	Canis_lupus_dingo
WBGene00011247	mrpl-49	81	31.788	ENSCHIG00000013156	MRPL49	83	31.788	Capra_hircus
WBGene00011247	mrpl-49	71	33.835	ENSTSYG00000014666	MRPL49	74	33.835	Carlito_syrichta
WBGene00011247	mrpl-49	73	32.847	ENSCAPG00000003717	MRPL49	91	32.847	Cavia_aperea
WBGene00011247	mrpl-49	73	32.847	ENSCPOG00000032785	MRPL49	77	32.847	Cavia_porcellus
WBGene00011247	mrpl-49	71	33.835	ENSCCAG00000018444	MRPL49	74	33.835	Cebus_capucinus
WBGene00011247	mrpl-49	73	33.577	ENSCATG00000044183	MRPL49	74	33.835	Cercocebus_atys
WBGene00011247	mrpl-49	73	32.847	ENSCLAG00000016311	MRPL49	77	32.847	Chinchilla_lanigera
WBGene00011247	mrpl-49	71	31.579	ENSCSAG00000000513	-	74	31.579	Chlorocebus_sabaeus
WBGene00011247	mrpl-49	71	33.582	ENSCSAG00000007671	-	74	33.582	Chlorocebus_sabaeus
WBGene00011247	mrpl-49	73	32.847	ENSCHOG00000012855	MRPL49	77	32.847	Choloepus_hoffmanni
WBGene00011247	mrpl-49	71	30.827	ENSCPBG00000023636	-	69	30.827	Chrysemys_picta_bellii
WBGene00011247	mrpl-49	80	32.903	ENSCING00000000953	-	86	32.903	Ciona_intestinalis
WBGene00011247	mrpl-49	71	32.576	ENSCSAVG00000001577	-	71	32.576	Ciona_savignyi
WBGene00011247	mrpl-49	71	33.835	ENSCANG00000041392	MRPL49	74	33.835	Colobus_angolensis_palliatus
WBGene00011247	mrpl-49	73	33.577	ENSCGRG00001024245	Mrpl49	74	33.835	Cricetulus_griseus_chok1gshd
WBGene00011247	mrpl-49	73	32.847	ENSCGRG00000001386	Mrpl49	74	33.083	Cricetulus_griseus_crigri
WBGene00011247	mrpl-49	79	31.757	ENSCSEG00000003115	MRPL49	76	31.757	Cynoglossus_semilaevis
WBGene00011247	mrpl-49	75	31.206	ENSCVAG00000011562	MRPL49	78	31.206	Cyprinodon_variegatus
WBGene00011247	mrpl-49	71	32.331	ENSDARG00000075422	MRPL49	69	32.331	Danio_rerio
WBGene00011247	mrpl-49	79	30.405	ENSDNOG00000034205	-	88	30.405	Dasypus_novemcinctus
WBGene00011247	mrpl-49	71	32.331	ENSDNOG00000004494	-	74	32.331	Dasypus_novemcinctus
WBGene00011247	mrpl-49	72	33.088	FBgn0030433	mRpL49	70	33.088	Drosophila_melanogaster
WBGene00011247	mrpl-49	73	36.029	ENSEBUG00000003645	MRPL49	62	36.029	Eptatretus_burgeri
WBGene00011247	mrpl-49	71	32.331	ENSEASG00005018211	MRPL49	74	32.331	Equus_asinus_asinus
WBGene00011247	mrpl-49	71	33.083	ENSECAG00000022196	MRPL49	74	33.083	Equus_caballus
WBGene00011247	mrpl-49	75	31.915	ENSELUG00000016206	mrpl49	73	31.915	Esox_lucius
WBGene00011247	mrpl-49	71	32.331	ENSFCAG00000006256	MRPL49	74	32.331	Felis_catus
WBGene00011247	mrpl-49	73	33.577	ENSFDAG00000011518	MRPL49	77	33.577	Fukomys_damarensis
WBGene00011247	mrpl-49	80	34.667	ENSFHEG00000011616	MRPL49	78	34.667	Fundulus_heteroclitus
WBGene00011247	mrpl-49	75	34.752	ENSGAFG00000015749	MRPL49	75	34.752	Gambusia_affinis
WBGene00011247	mrpl-49	50	31.183	ENSGACG00000013127	MRPL49	58	31.183	Gasterosteus_aculeatus
WBGene00011247	mrpl-49	59	33.636	ENSGACG00000013129	-	73	34.586	Gasterosteus_aculeatus
WBGene00011247	mrpl-49	71	31.579	ENSGAGG00000025862	MRPL49	69	31.579	Gopherus_agassizii
WBGene00011247	mrpl-49	79	33.784	ENSGGOG00000024514	MRPL49	92	31.928	Gorilla_gorilla
WBGene00011247	mrpl-49	80	37.333	ENSHBUG00000014033	MRPL49	80	37.333	Haplochromis_burtoni
WBGene00011247	mrpl-49	73	34.307	ENSHGLG00000012648	MRPL49	77	34.307	Heterocephalus_glaber_female
WBGene00011247	mrpl-49	73	34.307	ENSHGLG00100014020	MRPL49	77	34.307	Heterocephalus_glaber_male
WBGene00011247	mrpl-49	52	38.776	ENSHCOG00000014496	-	64	38.776	Hippocampus_comes
WBGene00011247	mrpl-49	75	33.333	ENSIPUG00000017564	MRPL49	76	33.099	Ictalurus_punctatus
WBGene00011247	mrpl-49	94	31.073	ENSSTOG00000003344	MRPL49	98	31.073	Ictidomys_tridecemlineatus
WBGene00011247	mrpl-49	75	34.752	ENSKMAG00000005174	MRPL49	73	34.752	Kryptolebias_marmoratus
WBGene00011247	mrpl-49	74	36.691	ENSLBEG00000011553	MRPL49	72	36.691	Labrus_bergylta
WBGene00011247	mrpl-49	76	30.769	ENSLACG00000007674	MRPL49	81	30.769	Latimeria_chalumnae
WBGene00011247	mrpl-49	71	32.331	ENSLAFG00000001690	MRPL49	74	32.331	Loxodonta_africana
WBGene00011247	mrpl-49	61	30.702	ENSMFAG00000023679	-	71	30.702	Macaca_fascicularis
WBGene00011247	mrpl-49	71	33.835	ENSMFAG00000033395	MRPL49	74	33.835	Macaca_fascicularis
WBGene00011247	mrpl-49	61	30.702	ENSMMUG00000046617	-	71	30.702	Macaca_mulatta
WBGene00011247	mrpl-49	71	33.835	ENSMMUG00000018778	MRPL49	74	33.835	Macaca_mulatta
WBGene00011247	mrpl-49	71	33.083	ENSMNEG00000038966	MRPL49	74	33.083	Macaca_nemestrina
WBGene00011247	mrpl-49	73	33.577	ENSMLEG00000032826	-	74	33.835	Mandrillus_leucophaeus
WBGene00011247	mrpl-49	71	33.083	ENSMLEG00000026765	-	74	33.083	Mandrillus_leucophaeus
WBGene00011247	mrpl-49	81	37.086	ENSMZEG00005012362	MRPL49	80	37.086	Maylandia_zebra
WBGene00011247	mrpl-49	57	30.556	ENSMICG00000016604	-	69	30.556	Microcebus_murinus
WBGene00011247	mrpl-49	63	37.288	ENSMICG00000047047	-	66	37.288	Microcebus_murinus
WBGene00011247	mrpl-49	82	30.380	ENSMOCG00000015528	Mrpl49	89	30.380	Microtus_ochrogaster
WBGene00011247	mrpl-49	79	31.293	ENSMMOG00000017361	MRPL49	75	31.293	Mola_mola
WBGene00011247	mrpl-49	81	33.775	ENSMALG00000002403	MRPL49	69	36.090	Monopterus_albus
WBGene00011247	mrpl-49	71	33.083	MGP_CAROLIEiJ_G0022584	Mrpl49	74	33.083	Mus_caroli
WBGene00011247	mrpl-49	71	33.083	ENSMUSG00000007338	Mrpl49	74	33.083	Mus_musculus
WBGene00011247	mrpl-49	71	33.083	MGP_PahariEiJ_G0014078	Mrpl49	74	33.083	Mus_pahari
WBGene00011247	mrpl-49	71	33.083	MGP_SPRETEiJ_G0023495	Mrpl49	74	33.083	Mus_spretus
WBGene00011247	mrpl-49	71	33.835	ENSMPUG00000012227	MRPL49	74	33.835	Mustela_putorius_furo
WBGene00011247	mrpl-49	79	33.784	ENSMLUG00000015373	MRPL49	81	33.784	Myotis_lucifugus
WBGene00011247	mrpl-49	73	32.117	ENSNGAG00000008255	Mrpl49	74	32.331	Nannospalax_galili
WBGene00011247	mrpl-49	73	32.847	ENSNLEG00000005505	MRPL49	74	33.083	Nomascus_leucogenys
WBGene00011247	mrpl-49	74	32.374	ENSMEUG00000009437	MRPL49	88	33.083	Notamacropus_eugenii
WBGene00011247	mrpl-49	71	33.083	ENSOPRG00000009881	MRPL49	74	33.083	Ochotona_princeps
WBGene00011247	mrpl-49	73	32.374	ENSODEG00000000580	-	75	32.374	Octodon_degus
WBGene00011247	mrpl-49	73	35.036	ENSODEG00000017907	-	77	35.036	Octodon_degus
WBGene00011247	mrpl-49	73	32.847	ENSODEG00000018605	-	77	32.847	Octodon_degus
WBGene00011247	mrpl-49	81	36.424	ENSONIG00000021419	MRPL49	78	36.424	Oreochromis_niloticus
WBGene00011247	mrpl-49	73	32.847	ENSOCUG00000014882	MRPL49	74	33.083	Oryctolagus_cuniculus
WBGene00011247	mrpl-49	73	33.577	ENSORLG00000001995	MRPL49	71	33.835	Oryzias_latipes
WBGene00011247	mrpl-49	73	34.307	ENSORLG00020021002	MRPL49	72	34.586	Oryzias_latipes_hni
WBGene00011247	mrpl-49	73	33.577	ENSORLG00015015420	MRPL49	74	33.835	Oryzias_latipes_hsok
WBGene00011247	mrpl-49	73	32.847	ENSOMEG00000011162	MRPL49	72	33.083	Oryzias_melastigma
WBGene00011247	mrpl-49	75	33.571	ENSOGAG00000015018	MRPL49	78	33.571	Otolemur_garnettii
WBGene00011247	mrpl-49	81	32.450	ENSOARG00000012774	MRPL49	82	32.450	Ovis_aries
WBGene00011247	mrpl-49	89	31.325	ENSPPAG00000037118	MRPL49	92	31.325	Pan_paniscus
WBGene00011247	mrpl-49	71	32.331	ENSPPRG00000024886	MRPL49	74	32.331	Panthera_pardus
WBGene00011247	mrpl-49	71	32.331	ENSPTIG00000021250	MRPL49	74	32.331	Panthera_tigris_altaica
WBGene00011247	mrpl-49	89	31.325	ENSPTRG00000003867	MRPL49	92	31.325	Pan_troglodytes
WBGene00011247	mrpl-49	71	34.586	ENSPANG00000004414	-	74	34.586	Papio_anubis
WBGene00011247	mrpl-49	96	30.168	ENSPKIG00000023054	MRPL49	100	30.168	Paramormyrops_kingsleyae
WBGene00011247	mrpl-49	71	33.835	ENSPMAG00000000130	MRPL49	89	33.835	Petromyzon_marinus
WBGene00011247	mrpl-49	56	35.238	ENSPCIG00000007713	-	65	35.238	Phascolarctos_cinereus
WBGene00011247	mrpl-49	75	32.624	ENSPFOG00000020078	MRPL49	75	32.624	Poecilia_formosa
WBGene00011247	mrpl-49	75	32.624	ENSPFOG00000020458	-	75	32.624	Poecilia_formosa
WBGene00011247	mrpl-49	75	32.624	ENSPLAG00000017623	-	74	32.624	Poecilia_latipinna
WBGene00011247	mrpl-49	75	32.624	ENSPLAG00000006894	MRPL49	74	32.624	Poecilia_latipinna
WBGene00011247	mrpl-49	75	32.624	ENSPMEG00000023131	MRPL49	74	32.624	Poecilia_mexicana
WBGene00011247	mrpl-49	74	33.813	ENSPREG00000005735	MRPL49	74	33.813	Poecilia_reticulata
WBGene00011247	mrpl-49	73	33.577	ENSPPYG00000003076	MRPL49	74	33.835	Pongo_abelii
WBGene00011247	mrpl-49	71	34.586	ENSPCOG00000025188	MRPL49	74	34.586	Propithecus_coquereli
WBGene00011247	mrpl-49	71	33.083	ENSPVAG00000007916	MRPL49	74	33.083	Pteropus_vampyrus
WBGene00011247	mrpl-49	81	37.086	ENSPNYG00000005274	MRPL49	83	37.086	Pundamilia_nyererei
WBGene00011247	mrpl-49	74	33.813	ENSPNAG00000004978	MRPL49	73	33.813	Pygocentrus_nattereri
WBGene00011247	mrpl-49	71	33.083	ENSRNOG00000020975	Mrpl49	74	33.083	Rattus_norvegicus
WBGene00011247	mrpl-49	71	33.835	ENSRBIG00000033618	MRPL49	74	33.835	Rhinopithecus_bieti
WBGene00011247	mrpl-49	71	33.835	ENSRROG00000044624	MRPL49	74	33.835	Rhinopithecus_roxellana
WBGene00011247	mrpl-49	71	34.586	ENSSBOG00000028984	MRPL49	74	34.586	Saimiri_boliviensis_boliviensis
WBGene00011247	mrpl-49	74	34.532	ENSSHAG00000000390	MRPL49	92	34.532	Sarcophilus_harrisii
WBGene00011247	mrpl-49	77	32.639	ENSSFOG00015019687	MRPL49	88	33.333	Scleropages_formosus
WBGene00011247	mrpl-49	80	34.667	ENSSMAG00000001559	MRPL49	77	34.000	Scophthalmus_maximus
WBGene00011247	mrpl-49	75	35.461	ENSSDUG00000013816	MRPL49	77	35.461	Seriola_dumerili
WBGene00011247	mrpl-49	75	36.879	ENSSLDG00000001537	MRPL49	74	36.879	Seriola_lalandi_dorsalis
WBGene00011247	mrpl-49	55	32.353	ENSSARG00000011597	MRPL49	84	32.353	Sorex_araneus
WBGene00011247	mrpl-49	75	33.333	ENSSPAG00000000302	MRPL49	73	33.333	Stegastes_partitus
WBGene00011247	mrpl-49	81	33.113	ENSSSCG00000013001	MRPL49	83	33.113	Sus_scrofa
WBGene00011247	mrpl-49	81	32.450	ENSTRUG00000002203	MRPL49	74	32.450	Takifugu_rubripes
WBGene00011247	mrpl-49	97	30.769	ENSTNIG00000003284	MRPL49	100	30.769	Tetraodon_nigroviridis
WBGene00011247	mrpl-49	71	31.579	ENSTBEG00000007929	MRPL49	74	31.579	Tupaia_belangeri
WBGene00011247	mrpl-49	71	32.331	ENSTTRG00000017247	MRPL49	74	32.331	Tursiops_truncatus
WBGene00011247	mrpl-49	71	33.083	ENSUAMG00000012283	MRPL49	74	33.083	Ursus_americanus
WBGene00011247	mrpl-49	71	33.083	ENSUMAG00000008222	MRPL49	74	33.083	Ursus_maritimus
WBGene00011247	mrpl-49	71	32.331	ENSVVUG00000027381	MRPL49	74	32.331	Vulpes_vulpes
WBGene00011247	mrpl-49	71	33.083	ENSXETG00000031584	MRPL49	89	33.083	Xenopus_tropicalis
WBGene00011247	mrpl-49	80	32.667	ENSXCOG00000002126	MRPL49	76	32.624	Xiphophorus_couchianus
WBGene00011247	mrpl-49	80	33.333	ENSXMAG00000024309	MRPL49	73	33.333	Xiphophorus_maculatus