EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00011758 (Gene tree)
Gene ID: -
Gene Symbol: T13H5.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1903 bases
Position: chrII:8523494-8525396
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T13H5	SF3a60_bindingd	PF12108.8	4.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T13H5.4	-	1632	NM_063398	T13H5.4	500 (aa)	NP_495799	Q22469

Gene Model

Click here to download WBGene00011758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00011758's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00011758	T13H5.4	100	52.087	ENSG00000183431	SF3A3	100	52.087	Homo_sapiens
WBGene00011758	T13H5.4	100	52.087	ENSAPOG00000015608	sf3a3	100	52.087	Acanthochromis_polyacanthus
WBGene00011758	T13H5.4	100	52.087	ENSAMEG00000001262	SF3A3	100	52.087	Ailuropoda_melanoleuca
WBGene00011758	T13H5.4	95	46.955	ENSACIG00000009061	sf3a3	99	46.955	Amphilophus_citrinellus
WBGene00011758	T13H5.4	100	51.889	ENSAOCG00000013954	sf3a3	100	51.889	Amphiprion_ocellaris
WBGene00011758	T13H5.4	100	51.889	ENSAPEG00000007297	sf3a3	100	51.889	Amphiprion_percula
WBGene00011758	T13H5.4	100	52.286	ENSATEG00000008754	sf3a3	100	52.286	Anabas_testudineus
WBGene00011758	T13H5.4	93	52.778	ENSAPLG00000014900	SF3A3	99	52.553	Anas_platyrhynchos
WBGene00011758	T13H5.4	100	52.286	ENSACAG00000017058	SF3A3	100	52.286	Anolis_carolinensis
WBGene00011758	T13H5.4	98	51.423	ENSANAG00000014878	SF3A3	98	51.423	Aotus_nancymaae
WBGene00011758	T13H5.4	100	41.317	ENSANAG00000036903	-	100	40.918	Aotus_nancymaae
WBGene00011758	T13H5.4	100	52.087	ENSACLG00000017977	sf3a3	100	52.087	Astatotilapia_calliptera
WBGene00011758	T13H5.4	100	51.491	ENSAMXG00000016855	sf3a3	87	51.491	Astyanax_mexicanus
WBGene00011758	T13H5.4	100	52.087	ENSBTAG00000007299	SF3A3	100	52.087	Bos_taurus
WBGene00011758	T13H5.4	100	52.087	ENSCJAG00000002176	SF3A3	100	52.087	Callithrix_jacchus
WBGene00011758	T13H5.4	100	52.087	ENSCAFG00000003222	-	100	52.087	Canis_familiaris
WBGene00011758	T13H5.4	100	52.087	ENSCAFG00000000683	-	100	52.087	Canis_familiaris
WBGene00011758	T13H5.4	100	52.087	ENSCAFG00020006186	SF3A3	100	52.087	Canis_lupus_dingo
WBGene00011758	T13H5.4	100	52.087	ENSCHIG00000020638	SF3A3	100	52.087	Capra_hircus
WBGene00011758	T13H5.4	100	47.316	ENSTSYG00000008417	SF3A3	100	47.316	Carlito_syrichta
WBGene00011758	T13H5.4	85	36.866	ENSCAPG00000003466	SF3A3	99	36.879	Cavia_aperea
WBGene00011758	T13H5.4	100	52.087	ENSCPOG00000008660	SF3A3	100	52.087	Cavia_porcellus
WBGene00011758	T13H5.4	100	38.767	ENSCCAG00000034048	-	100	39.721	Cebus_capucinus
WBGene00011758	T13H5.4	100	52.087	ENSCCAG00000033732	SF3A3	100	52.087	Cebus_capucinus
WBGene00011758	T13H5.4	100	38.645	ENSCATG00000043537	-	100	39.321	Cercocebus_atys
WBGene00011758	T13H5.4	100	52.087	ENSCATG00000043496	SF3A3	100	52.087	Cercocebus_atys
WBGene00011758	T13H5.4	92	45.376	ENSCATG00000041660	-	99	45.376	Cercocebus_atys
WBGene00011758	T13H5.4	100	52.087	ENSCLAG00000010838	SF3A3	100	52.087	Chinchilla_lanigera
WBGene00011758	T13H5.4	95	50.209	ENSCSAG00000001120	SF3A3	100	50.209	Chlorocebus_sabaeus
WBGene00011758	T13H5.4	79	61.828	ENSCHOG00000006849	SF3A3	79	61.828	Choloepus_hoffmanni
WBGene00011758	T13H5.4	52	38.403	ENSCPBG00000007472	-	75	37.970	Chrysemys_picta_bellii
WBGene00011758	T13H5.4	100	49.304	ENSCPBG00000018291	-	100	49.304	Chrysemys_picta_bellii
WBGene00011758	T13H5.4	100	52.941	ENSCING00000002730	-	100	52.941	Ciona_intestinalis
WBGene00011758	T13H5.4	100	51.697	ENSCSAVG00000005063	-	100	51.697	Ciona_savignyi
WBGene00011758	T13H5.4	100	38.323	ENSCANG00000035535	-	100	38.124	Colobus_angolensis_palliatus
WBGene00011758	T13H5.4	100	52.087	ENSCANG00000042083	SF3A3	100	52.087	Colobus_angolensis_palliatus
WBGene00011758	T13H5.4	100	52.087	ENSCGRG00001011320	Sf3a3	100	52.087	Cricetulus_griseus_chok1gshd
WBGene00011758	T13H5.4	100	52.087	ENSCGRG00000012156	Sf3a3	100	52.087	Cricetulus_griseus_crigri
WBGene00011758	T13H5.4	100	51.292	ENSCSEG00000010401	sf3a3	100	51.292	Cynoglossus_semilaevis
WBGene00011758	T13H5.4	93	52.128	ENSCVAG00000010239	sf3a3	95	52.128	Cyprinodon_variegatus
WBGene00011758	T13H5.4	100	51.690	ENSDARG00000100114	sf3a3	100	52.969	Danio_rerio
WBGene00011758	T13H5.4	91	50.437	ENSDNOG00000046628	SF3A3	99	50.437	Dasypus_novemcinctus
WBGene00011758	T13H5.4	100	52.087	ENSDORG00000008798	Sf3a3	100	52.087	Dipodomys_ordii
WBGene00011758	T13H5.4	100	48.419	FBgn0014366	noi	100	48.617	Drosophila_melanogaster
WBGene00011758	T13H5.4	100	50.495	ENSEBUG00000015411	sf3a3	92	50.693	Eptatretus_burgeri
WBGene00011758	T13H5.4	100	52.087	ENSEASG00005012906	SF3A3	100	52.087	Equus_asinus_asinus
WBGene00011758	T13H5.4	100	52.087	ENSECAG00000017333	SF3A3	100	52.087	Equus_caballus
WBGene00011758	T13H5.4	100	52.286	ENSELUG00000010024	sf3a3	100	52.286	Esox_lucius
WBGene00011758	T13H5.4	100	52.087	ENSFCAG00000027772	SF3A3	100	52.087	Felis_catus
WBGene00011758	T13H5.4	100	52.485	ENSFALG00000001003	SF3A3	100	52.485	Ficedula_albicollis
WBGene00011758	T13H5.4	100	52.087	ENSFDAG00000020908	SF3A3	100	52.087	Fukomys_damarensis
WBGene00011758	T13H5.4	100	51.690	ENSFHEG00000019107	sf3a3	100	51.690	Fundulus_heteroclitus
WBGene00011758	T13H5.4	100	51.093	ENSGMOG00000015540	sf3a3	100	51.093	Gadus_morhua
WBGene00011758	T13H5.4	100	52.485	ENSGALG00000001540	SF3A3	100	52.485	Gallus_gallus
WBGene00011758	T13H5.4	100	52.087	ENSGAFG00000002320	sf3a3	100	52.087	Gambusia_affinis
WBGene00011758	T13H5.4	100	51.889	ENSGACG00000007842	sf3a3	100	51.889	Gasterosteus_aculeatus
WBGene00011758	T13H5.4	100	52.286	ENSGAGG00000014980	SF3A3	100	52.286	Gopherus_agassizii
WBGene00011758	T13H5.4	100	39.122	ENSGGOG00000022611	-	100	38.323	Gorilla_gorilla
WBGene00011758	T13H5.4	100	52.087	ENSGGOG00000013928	SF3A3	100	52.087	Gorilla_gorilla
WBGene00011758	T13H5.4	100	52.087	ENSHBUG00000018158	sf3a3	100	53.275	Haplochromis_burtoni
WBGene00011758	T13H5.4	100	52.087	ENSHGLG00000012502	SF3A3	100	52.087	Heterocephalus_glaber_female
WBGene00011758	T13H5.4	100	52.087	ENSHGLG00100010546	SF3A3	100	52.087	Heterocephalus_glaber_male
WBGene00011758	T13H5.4	100	51.491	ENSHCOG00000015109	sf3a3	100	51.491	Hippocampus_comes
WBGene00011758	T13H5.4	100	51.491	ENSIPUG00000011603	sf3a3	100	51.491	Ictalurus_punctatus
WBGene00011758	T13H5.4	100	52.087	ENSSTOG00000001691	SF3A3	100	52.087	Ictidomys_tridecemlineatus
WBGene00011758	T13H5.4	100	52.087	ENSJJAG00000012404	Sf3a3	100	52.087	Jaculus_jaculus
WBGene00011758	T13H5.4	100	51.690	ENSKMAG00000007632	sf3a3	100	51.690	Kryptolebias_marmoratus
WBGene00011758	T13H5.4	100	50.000	ENSLBEG00000000816	sf3a3	100	50.000	Labrus_bergylta
WBGene00011758	T13H5.4	100	52.286	ENSLOCG00000003273	sf3a3	100	52.286	Lepisosteus_oculatus
WBGene00011758	T13H5.4	100	47.515	ENSLAFG00000008094	SF3A3	100	47.515	Loxodonta_africana
WBGene00011758	T13H5.4	100	52.087	ENSMFAG00000043047	SF3A3	100	52.087	Macaca_fascicularis
WBGene00011758	T13H5.4	92	42.612	ENSMFAG00000036706	-	99	42.398	Macaca_fascicularis
WBGene00011758	T13H5.4	100	52.087	ENSMMUG00000023199	SF3A3	100	52.087	Macaca_mulatta
WBGene00011758	T13H5.4	99	45.800	ENSMMUG00000038820	-	100	45.800	Macaca_mulatta
WBGene00011758	T13H5.4	92	42.184	ENSMNEG00000028686	-	99	41.970	Macaca_nemestrina
WBGene00011758	T13H5.4	100	52.087	ENSMNEG00000044291	SF3A3	100	52.087	Macaca_nemestrina
WBGene00011758	T13H5.4	100	52.087	ENSMLEG00000030641	SF3A3	100	52.087	Mandrillus_leucophaeus
WBGene00011758	T13H5.4	100	38.645	ENSMLEG00000028631	-	100	38.645	Mandrillus_leucophaeus
WBGene00011758	T13H5.4	99	46.825	ENSMLEG00000036714	-	100	46.825	Mandrillus_leucophaeus
WBGene00011758	T13H5.4	100	52.286	ENSMAMG00000001942	sf3a3	100	52.286	Mastacembelus_armatus
WBGene00011758	T13H5.4	100	52.087	ENSMZEG00005016987	sf3a3	100	52.087	Maylandia_zebra
WBGene00011758	T13H5.4	100	50.891	ENSMGAG00000002875	SF3A3	100	50.891	Meleagris_gallopavo
WBGene00011758	T13H5.4	91	49.130	ENSMICG00000026541	-	100	49.130	Microcebus_murinus
WBGene00011758	T13H5.4	100	49.503	ENSMICG00000043548	-	100	48.509	Microcebus_murinus
WBGene00011758	T13H5.4	100	50.898	ENSMICG00000001485	-	100	50.898	Microcebus_murinus
WBGene00011758	T13H5.4	100	51.089	ENSMOCG00000019939	-	100	51.089	Microtus_ochrogaster
WBGene00011758	T13H5.4	95	51.153	ENSMOCG00000014565	-	97	49.895	Microtus_ochrogaster
WBGene00011758	T13H5.4	100	51.889	ENSMMOG00000014307	sf3a3	100	51.889	Mola_mola
WBGene00011758	T13H5.4	100	49.503	ENSMODG00000024045	-	100	49.503	Monodelphis_domestica
WBGene00011758	T13H5.4	100	39.458	ENSMODG00000017729	-	100	39.038	Monodelphis_domestica
WBGene00011758	T13H5.4	100	52.087	ENSMALG00000004836	sf3a3	100	53.275	Monopterus_albus
WBGene00011758	T13H5.4	100	52.087	MGP_CAROLIEiJ_G0026449	Sf3a3	100	52.087	Mus_caroli
WBGene00011758	T13H5.4	100	52.087	ENSMUSG00000028902	Sf3a3	100	52.087	Mus_musculus
WBGene00011758	T13H5.4	100	49.304	MGP_PahariEiJ_G0028780	Sf3a3	100	49.304	Mus_pahari
WBGene00011758	T13H5.4	100	52.087	MGP_SPRETEiJ_G0027428	Sf3a3	100	52.087	Mus_spretus
WBGene00011758	T13H5.4	100	52.087	ENSMLUG00000000991	SF3A3	100	52.087	Myotis_lucifugus
WBGene00011758	T13H5.4	100	50.895	ENSNGAG00000018032	Sf3a3	100	50.895	Nannospalax_galili
WBGene00011758	T13H5.4	100	49.602	ENSNLEG00000011720	SF3A3	100	49.602	Nomascus_leucogenys
WBGene00011758	T13H5.4	100	52.087	ENSOPRG00000012785	SF3A3	100	52.087	Ochotona_princeps
WBGene00011758	T13H5.4	100	45.040	ENSODEG00000000937	-	100	45.040	Octodon_degus
WBGene00011758	T13H5.4	100	46.322	ENSODEG00000018393	-	100	45.726	Octodon_degus
WBGene00011758	T13H5.4	100	50.895	ENSODEG00000007470	-	100	50.895	Octodon_degus
WBGene00011758	T13H5.4	100	49.702	ENSODEG00000006854	-	100	50.099	Octodon_degus
WBGene00011758	T13H5.4	86	53.811	ENSONIG00000010296	sf3a3	99	53.811	Oreochromis_niloticus
WBGene00011758	T13H5.4	93	52.564	ENSOANG00000002473	SF3A3	99	52.340	Ornithorhynchus_anatinus
WBGene00011758	T13H5.4	100	52.087	ENSOCUG00000005407	SF3A3	100	52.087	Oryctolagus_cuniculus
WBGene00011758	T13H5.4	100	51.889	ENSORLG00000008175	sf3a3	100	51.889	Oryzias_latipes
WBGene00011758	T13H5.4	100	51.889	ENSORLG00020013708	sf3a3	100	51.889	Oryzias_latipes_hni
WBGene00011758	T13H5.4	100	51.889	ENSORLG00015004104	sf3a3	100	51.889	Oryzias_latipes_hsok
WBGene00011758	T13H5.4	100	52.087	ENSOMEG00000020177	sf3a3	100	52.087	Oryzias_melastigma
WBGene00011758	T13H5.4	100	52.087	ENSOARG00000019950	SF3A3	100	52.087	Ovis_aries
WBGene00011758	T13H5.4	100	39.321	ENSPPAG00000039955	-	100	38.523	Pan_paniscus
WBGene00011758	T13H5.4	100	52.087	ENSPPAG00000034066	SF3A3	100	52.087	Pan_paniscus
WBGene00011758	T13H5.4	100	52.087	ENSPPRG00000001258	SF3A3	100	52.087	Panthera_pardus
WBGene00011758	T13H5.4	100	52.087	ENSPTIG00000007515	SF3A3	100	52.087	Panthera_tigris_altaica
WBGene00011758	T13H5.4	100	39.122	ENSPTRG00000046013	-	100	38.323	Pan_troglodytes
WBGene00011758	T13H5.4	100	52.087	ENSPTRG00000000559	SF3A3	100	52.087	Pan_troglodytes
WBGene00011758	T13H5.4	99	48.008	ENSPANG00000029393	-	100	47.809	Papio_anubis
WBGene00011758	T13H5.4	100	52.087	ENSPANG00000021859	SF3A3	100	52.087	Papio_anubis
WBGene00011758	T13H5.4	86	62.195	ENSPANG00000031214	-	100	37.725	Papio_anubis
WBGene00011758	T13H5.4	100	51.690	ENSPKIG00000004719	sf3a3	100	51.690	Paramormyrops_kingsleyae
WBGene00011758	T13H5.4	100	51.287	ENSPSIG00000004273	SF3A3	100	51.287	Pelodiscus_sinensis
WBGene00011758	T13H5.4	91	50.437	ENSPMGG00000003610	sf3a3	94	50.437	Periophthalmus_magnuspinnatus
WBGene00011758	T13H5.4	100	52.087	ENSPEMG00000020805	Sf3a3	100	52.087	Peromyscus_maniculatus_bairdii
WBGene00011758	T13H5.4	54	42.222	ENSPMAG00000001044	sf3a3	97	42.222	Petromyzon_marinus
WBGene00011758	T13H5.4	100	52.087	ENSPCIG00000025719	SF3A3	100	52.087	Phascolarctos_cinereus
WBGene00011758	T13H5.4	100	52.087	ENSPFOG00000005284	sf3a3	100	52.087	Poecilia_formosa
WBGene00011758	T13H5.4	97	49.898	ENSPLAG00000003979	sf3a3	91	49.898	Poecilia_latipinna
WBGene00011758	T13H5.4	78	45.063	ENSPMEG00000021132	sf3a3	88	45.063	Poecilia_mexicana
WBGene00011758	T13H5.4	100	52.087	ENSPREG00000013802	sf3a3	100	52.087	Poecilia_reticulata
WBGene00011758	T13H5.4	100	51.383	ENSPPYG00000001519	SF3A3	100	51.383	Pongo_abelii
WBGene00011758	T13H5.4	100	49.801	ENSPCAG00000010734	SF3A3	100	49.801	Procavia_capensis
WBGene00011758	T13H5.4	100	45.850	ENSPCOG00000020389	-	100	45.850	Propithecus_coquereli
WBGene00011758	T13H5.4	100	45.200	ENSPCOG00000017131	-	100	45.200	Propithecus_coquereli
WBGene00011758	T13H5.4	88	67.204	ENSPVAG00000010158	SF3A3	88	67.204	Pteropus_vampyrus
WBGene00011758	T13H5.4	100	52.087	ENSPNYG00000000786	sf3a3	100	52.087	Pundamilia_nyererei
WBGene00011758	T13H5.4	100	51.292	ENSPNAG00000010298	sf3a3	100	51.292	Pygocentrus_nattereri
WBGene00011758	T13H5.4	100	52.087	ENSRNOG00000007629	Sf3a3	100	52.087	Rattus_norvegicus
WBGene00011758	T13H5.4	100	42.460	ENSRBIG00000041123	-	100	42.460	Rhinopithecus_bieti
WBGene00011758	T13H5.4	100	40.519	ENSRBIG00000043833	-	100	40.519	Rhinopithecus_bieti
WBGene00011758	T13H5.4	100	52.087	ENSRBIG00000043567	SF3A3	100	52.087	Rhinopithecus_bieti
WBGene00011758	T13H5.4	100	52.087	ENSRROG00000033888	SF3A3	100	52.087	Rhinopithecus_roxellana
WBGene00011758	T13H5.4	93	43.777	ENSRROG00000032346	-	99	43.777	Rhinopithecus_roxellana
WBGene00011758	T13H5.4	100	39.721	ENSSBOG00000026932	-	100	41.118	Saimiri_boliviensis_boliviensis
WBGene00011758	T13H5.4	86	55.975	ENSSBOG00000032688	SF3A3	100	55.975	Saimiri_boliviensis_boliviensis
WBGene00011758	T13H5.4	90	53.407	ENSSHAG00000014530	SF3A3	100	53.407	Sarcophilus_harrisii
WBGene00011758	T13H5.4	100	52.087	ENSSFOG00015005975	sf3a3	100	52.087	Scleropages_formosus
WBGene00011758	T13H5.4	100	51.690	ENSSMAG00000020213	sf3a3	100	51.690	Scophthalmus_maximus
WBGene00011758	T13H5.4	100	49.702	ENSSDUG00000011590	sf3a3	100	49.702	Seriola_dumerili
WBGene00011758	T13H5.4	100	52.087	ENSSLDG00000020635	sf3a3	100	52.087	Seriola_lalandi_dorsalis
WBGene00011758	T13H5.4	100	52.485	ENSSPUG00000004010	SF3A3	100	52.485	Sphenodon_punctatus
WBGene00011758	T13H5.4	100	52.087	ENSSPAG00000018653	sf3a3	100	52.087	Stegastes_partitus
WBGene00011758	T13H5.4	100	52.087	ENSSSCG00000003643	SF3A3	100	52.087	Sus_scrofa
WBGene00011758	T13H5.4	86	54.042	ENSTGUG00000001466	SF3A3	99	54.042	Taeniopygia_guttata
WBGene00011758	T13H5.4	100	51.690	ENSTRUG00000009089	sf3a3	100	51.690	Takifugu_rubripes
WBGene00011758	T13H5.4	100	51.287	ENSTNIG00000009800	sf3a3	100	51.287	Tetraodon_nigroviridis
WBGene00011758	T13H5.4	100	44.533	ENSTBEG00000007614	SF3A3	100	44.533	Tupaia_belangeri
WBGene00011758	T13H5.4	100	51.889	ENSTTRG00000013519	SF3A3	100	51.889	Tursiops_truncatus
WBGene00011758	T13H5.4	100	52.087	ENSUAMG00000006134	SF3A3	100	52.087	Ursus_americanus
WBGene00011758	T13H5.4	100	52.087	ENSUMAG00000021250	SF3A3	100	52.087	Ursus_maritimus
WBGene00011758	T13H5.4	66	69.767	ENSVPAG00000004778	SF3A3	73	69.767	Vicugna_pacos
WBGene00011758	T13H5.4	100	49.503	ENSVVUG00000022908	SF3A3	100	49.503	Vulpes_vulpes
WBGene00011758	T13H5.4	100	51.690	ENSXETG00000022923	sf3a3	100	51.690	Xenopus_tropicalis
WBGene00011758	T13H5.4	100	52.087	ENSXMAG00000017165	sf3a3	100	52.087	Xiphophorus_maculatus