EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00012030 (Gene tree)
Gene ID: -
Gene Symbol: T25G3.3
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 2511 bases
Position: chrI:7559839-7562349
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T25G3	NMD3	PF04981.13	1.7e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T25G3.3	-	1732	NM_059713	T25G3.3	513 (aa)	NP_492114	Q22792

Gene Model

Click here to download WBGene00012030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00012030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00012030	T25G3.3	99	50.874	ENSG00000169251	NMD3	97	61.842	Homo_sapiens
WBGene00012030	T25G3.3	96	50.607	ENSAPOG00000022912	nmd3	96	50.607	Acanthochromis_polyacanthus
WBGene00012030	T25G3.3	97	51.200	ENSAMEG00000001584	NMD3	97	51.200	Ailuropoda_melanoleuca
WBGene00012030	T25G3.3	96	46.761	ENSACIG00000015196	nmd3	96	46.761	Amphilophus_citrinellus
WBGene00012030	T25G3.3	96	50.810	ENSAOCG00000009086	nmd3	96	50.810	Amphiprion_ocellaris
WBGene00012030	T25G3.3	96	50.607	ENSAPEG00000000329	nmd3	96	50.607	Amphiprion_percula
WBGene00012030	T25G3.3	96	50.203	ENSATEG00000014351	nmd3	96	50.610	Anabas_testudineus
WBGene00012030	T25G3.3	98	48.915	ENSAPLG00000014786	NMD3	98	48.915	Anas_platyrhynchos
WBGene00012030	T25G3.3	95	51.125	ENSACAG00000007349	NMD3	95	51.125	Anolis_carolinensis
WBGene00012030	T25G3.3	96	51.919	ENSANAG00000026434	NMD3	97	51.731	Aotus_nancymaae
WBGene00012030	T25G3.3	96	49.393	ENSACLG00000015520	nmd3	96	49.393	Astatotilapia_calliptera
WBGene00012030	T25G3.3	96	49.593	ENSAMXG00000014415	nmd3	96	49.593	Astyanax_mexicanus
WBGene00012030	T25G3.3	97	51.195	ENSBTAG00000016228	NMD3	98	51.195	Bos_taurus
WBGene00012030	T25G3.3	97	51.102	ENSCJAG00000002900	NMD3	95	51.102	Callithrix_jacchus
WBGene00012030	T25G3.3	96	51.116	ENSCAFG00000014352	NMD3	95	50.909	Canis_familiaris
WBGene00012030	T25G3.3	97	51.303	ENSCAFG00020021145	NMD3	97	51.303	Canis_lupus_dingo
WBGene00012030	T25G3.3	97	50.996	ENSCHIG00000016015	NMD3	98	50.996	Capra_hircus
WBGene00012030	T25G3.3	96	50.701	ENSTSYG00000002155	NMD3	97	50.701	Carlito_syrichta
WBGene00012030	T25G3.3	76	51.786	ENSCAPG00000017861	NMD3	91	51.786	Cavia_aperea
WBGene00012030	T25G3.3	81	53.717	ENSCPOG00000005953	NMD3	89	53.717	Cavia_porcellus
WBGene00012030	T25G3.3	96	51.807	ENSCCAG00000037460	NMD3	97	51.308	Cebus_capucinus
WBGene00012030	T25G3.3	99	50.485	ENSCATG00000030022	NMD3	98	50.198	Cercocebus_atys
WBGene00012030	T25G3.3	97	51.503	ENSCLAG00000003155	NMD3	97	51.503	Chinchilla_lanigera
WBGene00012030	T25G3.3	98	50.198	ENSCSAG00000012333	NMD3	98	50.198	Chlorocebus_sabaeus
WBGene00012030	T25G3.3	78	46.503	ENSCHOG00000001240	NMD3	78	46.503	Choloepus_hoffmanni
WBGene00012030	T25G3.3	99	49.804	ENSCPBG00000018318	NMD3	100	49.284	Chrysemys_picta_bellii
WBGene00012030	T25G3.3	97	50.503	ENSCING00000002129	-	97	50.503	Ciona_intestinalis
WBGene00012030	T25G3.3	89	47.921	ENSCSAVG00000001120	-	99	47.921	Ciona_savignyi
WBGene00012030	T25G3.3	98	48.718	ENSCANG00000042939	NMD3	93	48.718	Colobus_angolensis_palliatus
WBGene00012030	T25G3.3	90	42.918	ENSCGRG00001001792	Nmd3	96	42.918	Cricetulus_griseus_chok1gshd
WBGene00012030	T25G3.3	96	50.909	ENSCGRG00000007947	Nmd3	98	50.909	Cricetulus_griseus_crigri
WBGene00012030	T25G3.3	96	49.393	ENSCSEG00000017954	nmd3	96	49.393	Cynoglossus_semilaevis
WBGene00012030	T25G3.3	96	47.358	ENSCVAG00000004672	nmd3	97	47.390	Cyprinodon_variegatus
WBGene00012030	T25G3.3	96	49.798	ENSDARG00000015676	nmd3	96	49.798	Danio_rerio
WBGene00012030	T25G3.3	98	50.198	ENSDNOG00000045222	NMD3	98	50.198	Dasypus_novemcinctus
WBGene00012030	T25G3.3	97	47.082	ENSDORG00000005716	Nmd3	93	54.795	Dipodomys_ordii
WBGene00012030	T25G3.3	97	47.316	FBgn0023542	Nmd3	95	47.316	Drosophila_melanogaster
WBGene00012030	T25G3.3	96	44.467	ENSETEG00000003168	NMD3	97	44.467	Echinops_telfairi
WBGene00012030	T25G3.3	85	52.055	ENSEBUG00000014316	nmd3	94	52.055	Eptatretus_burgeri
WBGene00012030	T25G3.3	98	50.696	ENSEASG00005018672	NMD3	97	50.696	Equus_asinus_asinus
WBGene00012030	T25G3.3	96	50.909	ENSECAG00000000188	NMD3	95	50.909	Equus_caballus
WBGene00012030	T25G3.3	93	39.040	ENSEEUG00000010642	-	99	39.040	Erinaceus_europaeus
WBGene00012030	T25G3.3	96	50.000	ENSELUG00000024123	nmd3	96	50.000	Esox_lucius
WBGene00012030	T25G3.3	97	50.902	ENSFCAG00000022867	NMD3	97	50.902	Felis_catus
WBGene00012030	T25G3.3	95	48.049	ENSFALG00000008711	NMD3	100	48.049	Ficedula_albicollis
WBGene00012030	T25G3.3	96	50.905	ENSFDAG00000013724	-	97	50.905	Fukomys_damarensis
WBGene00012030	T25G3.3	96	43.750	ENSFDAG00000012197	-	98	43.750	Fukomys_damarensis
WBGene00012030	T25G3.3	98	49.307	ENSFHEG00000000415	nmd3	98	49.307	Fundulus_heteroclitus
WBGene00012030	T25G3.3	95	49.796	ENSGMOG00000009675	nmd3	99	49.796	Gadus_morhua
WBGene00012030	T25G3.3	96	49.390	ENSGALG00000009533	NMD3	96	49.390	Gallus_gallus
WBGene00012030	T25G3.3	96	49.798	ENSGAFG00000012798	nmd3	93	49.698	Gambusia_affinis
WBGene00012030	T25G3.3	97	50.000	ENSGACG00000010028	nmd3	97	50.000	Gasterosteus_aculeatus
WBGene00012030	T25G3.3	99	49.606	ENSGAGG00000006556	NMD3	99	49.606	Gopherus_agassizii
WBGene00012030	T25G3.3	99	50.874	ENSGGOG00000007157	NMD3	98	50.996	Gorilla_gorilla
WBGene00012030	T25G3.3	96	43.002	ENSGGOG00000028590	-	98	40.909	Gorilla_gorilla
WBGene00012030	T25G3.3	96	49.393	ENSHBUG00000001781	nmd3	96	49.393	Haplochromis_burtoni
WBGene00012030	T25G3.3	97	51.102	ENSHGLG00000014451	-	97	51.102	Heterocephalus_glaber_female
WBGene00012030	T25G3.3	96	39.798	ENSHGLG00000010477	-	97	39.798	Heterocephalus_glaber_female
WBGene00012030	T25G3.3	97	51.102	ENSHGLG00100006613	-	97	51.102	Heterocephalus_glaber_male
WBGene00012030	T25G3.3	96	40.000	ENSHGLG00100001042	-	97	40.000	Heterocephalus_glaber_male
WBGene00012030	T25G3.3	96	49.497	ENSHCOG00000004292	nmd3	90	49.497	Hippocampus_comes
WBGene00012030	T25G3.3	96	48.381	ENSIPUG00000005073	nmd3	96	48.381	Ictalurus_punctatus
WBGene00012030	T25G3.3	98	50.593	ENSSTOG00000001899	NMD3	98	50.593	Ictidomys_tridecemlineatus
WBGene00012030	T25G3.3	96	51.318	ENSJJAG00000019759	Nmd3	99	51.318	Jaculus_jaculus
WBGene00012030	T25G3.3	97	50.600	ENSKMAG00000020427	nmd3	98	50.600	Kryptolebias_marmoratus
WBGene00012030	T25G3.3	96	49.597	ENSLBEG00000022216	nmd3	96	49.597	Labrus_bergylta
WBGene00012030	T25G3.3	95	49.281	ENSLACG00000005731	NMD3	95	53.461	Latimeria_chalumnae
WBGene00012030	T25G3.3	95	50.308	ENSLOCG00000003561	nmd3	98	49.503	Lepisosteus_oculatus
WBGene00012030	T25G3.3	98	50.099	ENSLAFG00000007231	NMD3	98	50.099	Loxodonta_africana
WBGene00012030	T25G3.3	99	50.485	ENSMFAG00000040934	NMD3	98	50.598	Macaca_fascicularis
WBGene00012030	T25G3.3	99	50.485	ENSMMUG00000009564	NMD3	95	50.485	Macaca_mulatta
WBGene00012030	T25G3.3	99	50.485	ENSMNEG00000034626	NMD3	98	50.598	Macaca_nemestrina
WBGene00012030	T25G3.3	87	49.333	ENSMLEG00000002741	NMD3	96	50.000	Mandrillus_leucophaeus
WBGene00012030	T25G3.3	96	49.187	ENSMAMG00000012427	nmd3	96	49.187	Mastacembelus_armatus
WBGene00012030	T25G3.3	96	49.393	ENSMZEG00005016888	nmd3	96	49.393	Maylandia_zebra
WBGene00012030	T25G3.3	96	48.984	ENSMGAG00000010498	NMD3	96	48.984	Meleagris_gallopavo
WBGene00012030	T25G3.3	97	50.397	ENSMAUG00000000633	Nmd3	98	50.397	Mesocricetus_auratus
WBGene00012030	T25G3.3	97	51.503	ENSMICG00000049196	NMD3	97	51.503	Microcebus_murinus
WBGene00012030	T25G3.3	96	51.116	ENSMOCG00000005180	Nmd3	96	51.324	Microtus_ochrogaster
WBGene00012030	T25G3.3	97	49.301	ENSMMOG00000012765	nmd3	98	49.301	Mola_mola
WBGene00012030	T25G3.3	95	42.424	ENSMODG00000016296	NMD3	96	43.287	Monodelphis_domestica
WBGene00012030	T25G3.3	97	49.600	ENSMALG00000009256	nmd3	98	49.600	Monopterus_albus
WBGene00012030	T25G3.3	97	51.406	MGP_CAROLIEiJ_G0025069	Nmd3	97	51.406	Mus_caroli
WBGene00012030	T25G3.3	97	51.406	ENSMUSG00000027787	Nmd3	97	51.406	Mus_musculus
WBGene00012030	T25G3.3	97	51.004	MGP_PahariEiJ_G0026512	Nmd3	97	51.004	Mus_pahari
WBGene00012030	T25G3.3	97	51.406	MGP_SPRETEiJ_G0026011	Nmd3	97	51.406	Mus_spretus
WBGene00012030	T25G3.3	97	51.503	ENSMPUG00000002955	NMD3	97	51.503	Mustela_putorius_furo
WBGene00012030	T25G3.3	97	48.911	ENSMLUG00000000701	NMD3	98	48.911	Myotis_lucifugus
WBGene00012030	T25G3.3	97	50.992	ENSNGAG00000012307	Nmd3	98	50.992	Nannospalax_galili
WBGene00012030	T25G3.3	96	48.988	ENSNBRG00000003324	nmd3	96	48.988	Neolamprologus_brichardi
WBGene00012030	T25G3.3	99	50.874	ENSNLEG00000004655	NMD3	98	50.996	Nomascus_leucogenys
WBGene00012030	T25G3.3	72	50.000	ENSOPRG00000007690	-	72	50.000	Ochotona_princeps
WBGene00012030	T25G3.3	98	51.093	ENSODEG00000006270	NMD3	98	51.521	Octodon_degus
WBGene00012030	T25G3.3	96	49.798	ENSONIG00000003643	nmd3	96	49.798	Oreochromis_niloticus
WBGene00012030	T25G3.3	98	50.693	ENSOCUG00000017454	NMD3	99	50.693	Oryctolagus_cuniculus
WBGene00012030	T25G3.3	97	49.200	ENSORLG00000006279	nmd3	98	49.200	Oryzias_latipes
WBGene00012030	T25G3.3	97	49.200	ENSORLG00020003843	nmd3	98	49.200	Oryzias_latipes_hni
WBGene00012030	T25G3.3	97	49.000	ENSORLG00015006379	nmd3	98	49.000	Oryzias_latipes_hsok
WBGene00012030	T25G3.3	96	50.810	ENSOMEG00000012144	nmd3	96	50.810	Oryzias_melastigma
WBGene00012030	T25G3.3	96	51.313	ENSOGAG00000014910	NMD3	97	51.313	Otolemur_garnettii
WBGene00012030	T25G3.3	95	51.224	ENSOARG00000001883	NMD3	94	51.224	Ovis_aries
WBGene00012030	T25G3.3	99	50.874	ENSPPAG00000043829	NMD3	98	50.593	Pan_paniscus
WBGene00012030	T25G3.3	97	51.000	ENSPPRG00000000724	NMD3	96	51.000	Panthera_pardus
WBGene00012030	T25G3.3	97	50.701	ENSPTIG00000016761	NMD3	97	50.701	Panthera_tigris_altaica
WBGene00012030	T25G3.3	99	50.680	ENSPTRG00000015586	NMD3	98	50.797	Pan_troglodytes
WBGene00012030	T25G3.3	99	50.485	ENSPANG00000006665	NMD3	95	50.485	Papio_anubis
WBGene00012030	T25G3.3	96	49.797	ENSPKIG00000009928	nmd3	96	49.797	Paramormyrops_kingsleyae
WBGene00012030	T25G3.3	99	49.608	ENSPSIG00000007591	NMD3	99	49.608	Pelodiscus_sinensis
WBGene00012030	T25G3.3	98	48.317	ENSPMGG00000014015	nmd3	97	48.509	Periophthalmus_magnuspinnatus
WBGene00012030	T25G3.3	97	50.398	ENSPEMG00000021880	Nmd3	98	50.398	Peromyscus_maniculatus_bairdii
WBGene00012030	T25G3.3	95	51.120	ENSPCIG00000020869	NMD3	98	52.298	Phascolarctos_cinereus
WBGene00012030	T25G3.3	96	50.202	ENSPFOG00000012103	nmd3	96	50.202	Poecilia_formosa
WBGene00012030	T25G3.3	96	50.202	ENSPLAG00000008087	nmd3	96	50.202	Poecilia_latipinna
WBGene00012030	T25G3.3	96	50.202	ENSPMEG00000008506	nmd3	96	50.202	Poecilia_mexicana
WBGene00012030	T25G3.3	96	50.000	ENSPREG00000001848	nmd3	96	50.000	Poecilia_reticulata
WBGene00012030	T25G3.3	97	50.797	ENSPPYG00000014263	NMD3	98	50.797	Pongo_abelii
WBGene00012030	T25G3.3	90	43.506	ENSPCAG00000009851	NMD3	99	43.506	Procavia_capensis
WBGene00012030	T25G3.3	82	65.138	ENSPVAG00000003301	NMD3	83	65.138	Pteropus_vampyrus
WBGene00012030	T25G3.3	96	49.393	ENSPNYG00000006778	nmd3	96	49.393	Pundamilia_nyererei
WBGene00012030	T25G3.3	96	49.593	ENSPNAG00000009442	nmd3	96	49.593	Pygocentrus_nattereri
WBGene00012030	T25G3.3	98	50.395	ENSRNOG00000009310	Nmd3	98	50.395	Rattus_norvegicus
WBGene00012030	T25G3.3	98	46.771	ENSRBIG00000040379	NMD3	98	46.771	Rhinopithecus_bieti
WBGene00012030	T25G3.3	99	51.068	ENSRROG00000036181	NMD3	98	50.791	Rhinopithecus_roxellana
WBGene00012030	T25G3.3	94	41.129	YHR170W	NMD3	93	41.129	Saccharomyces_cerevisiae
WBGene00012030	T25G3.3	98	49.901	ENSSBOG00000024021	NMD3	99	49.901	Saimiri_boliviensis_boliviensis
WBGene00012030	T25G3.3	95	49.087	ENSSHAG00000016044	NMD3	95	49.087	Sarcophilus_harrisii
WBGene00012030	T25G3.3	96	48.988	ENSSFOG00015003609	nmd3	96	48.988	Scleropages_formosus
WBGene00012030	T25G3.3	96	48.785	ENSSMAG00000012887	nmd3	96	48.785	Scophthalmus_maximus
WBGene00012030	T25G3.3	96	49.797	ENSSDUG00000023721	nmd3	96	49.797	Seriola_dumerili
WBGene00012030	T25G3.3	96	50.000	ENSSLDG00000006565	nmd3	96	50.000	Seriola_lalandi_dorsalis
WBGene00012030	T25G3.3	96	50.304	ENSSARG00000010402	NMD3	99	50.304	Sorex_araneus
WBGene00012030	T25G3.3	95	52.361	ENSSPUG00000018791	NMD3	96	52.361	Sphenodon_punctatus
WBGene00012030	T25G3.3	96	50.607	ENSSPAG00000014328	nmd3	96	50.607	Stegastes_partitus
WBGene00012030	T25G3.3	97	50.696	ENSSSCG00000022952	NMD3	97	50.696	Sus_scrofa
WBGene00012030	T25G3.3	97	49.701	ENSTGUG00000011140	-	98	49.701	Taeniopygia_guttata
WBGene00012030	T25G3.3	91	47.122	ENSTGUG00000015141	-	99	47.122	Taeniopygia_guttata
WBGene00012030	T25G3.3	96	49.595	ENSTRUG00000005958	nmd3	96	49.595	Takifugu_rubripes
WBGene00012030	T25G3.3	96	37.778	ENSTBEG00000011783	-	97	37.778	Tupaia_belangeri
WBGene00012030	T25G3.3	97	46.307	ENSTTRG00000012938	NMD3	98	46.307	Tursiops_truncatus
WBGene00012030	T25G3.3	78	54.271	ENSUAMG00000009305	-	97	53.807	Ursus_americanus
WBGene00012030	T25G3.3	96	50.909	ENSUMAG00000011070	NMD3	98	50.704	Ursus_maritimus
WBGene00012030	T25G3.3	97	51.107	ENSVPAG00000008779	NMD3	97	51.107	Vicugna_pacos
WBGene00012030	T25G3.3	97	51.303	ENSVVUG00000023055	NMD3	97	51.303	Vulpes_vulpes
WBGene00012030	T25G3.3	98	49.703	ENSXETG00000027727	nmd3	98	49.703	Xenopus_tropicalis
WBGene00012030	T25G3.3	60	62.338	ENSXCOG00000012490	nmd3	81	62.025	Xiphophorus_couchianus
WBGene00012030	T25G3.3	96	50.000	ENSXMAG00000018406	nmd3	96	50.000	Xiphophorus_maculatus