EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00012105 (Gene tree)
Gene ID: -
Gene Symbol: T27F6.6
Alias: -
Full Name: Putative neutral sphingomyelinase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3555 bases
Position: chrI:12490976-12494530
Accession: O45870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T27F6	Exo_endo_phos	PF03372.23	9.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T27F6.6	-	1479	NM_060768	T27F6.6	434 (aa)	NP_493169	O45870

Gene Model

Click here to download WBGene00012105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00012105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00012105	T27F6.6	70	39.739	ENSG00000135587	SMPD2	91	35.961	Homo_sapiens
WBGene00012105	T27F6.6	67	40.411	ENSAMEG00000016431	SMPD2	65	41.096	Ailuropoda_melanoleuca
WBGene00012105	T27F6.6	91	34.491	ENSACIG00000010069	smpd2b	95	34.491	Amphilophus_citrinellus
WBGene00012105	T27F6.6	68	41.275	ENSAOCG00000014544	smpd2b	63	41.275	Amphiprion_ocellaris
WBGene00012105	T27F6.6	68	41.275	ENSAPEG00000023764	smpd2b	63	41.275	Amphiprion_percula
WBGene00012105	T27F6.6	93	35.880	ENSATEG00000025113	smpd2b	72	39.222	Anabas_testudineus
WBGene00012105	T27F6.6	63	40.364	ENSACAG00000009270	SMPD2	76	38.415	Anolis_carolinensis
WBGene00012105	T27F6.6	72	39.241	ENSANAG00000028732	SMPD2	81	37.604	Aotus_nancymaae
WBGene00012105	T27F6.6	92	35.514	ENSACLG00000022892	smpd2b	91	35.514	Astatotilapia_calliptera
WBGene00012105	T27F6.6	67	43.151	ENSAMXG00000013614	smpd2b	64	43.151	Astyanax_mexicanus
WBGene00012105	T27F6.6	70	39.414	ENSCJAG00000005756	SMPD2	92	35.593	Callithrix_jacchus
WBGene00012105	T27F6.6	71	40.129	ENSCAFG00000003816	SMPD2	68	40.129	Canis_familiaris
WBGene00012105	T27F6.6	67	41.096	ENSCHIG00000022563	SMPD2	68	39.935	Capra_hircus
WBGene00012105	T27F6.6	67	41.438	ENSTSYG00000008525	SMPD2	81	37.604	Carlito_syrichta
WBGene00012105	T27F6.6	53	40.086	ENSCAPG00000008057	SMPD2	62	40.086	Cavia_aperea
WBGene00012105	T27F6.6	67	40.068	ENSCPOG00000003102	SMPD2	64	40.068	Cavia_porcellus
WBGene00012105	T27F6.6	72	38.924	ENSCCAG00000036357	SMPD2	80	37.465	Cebus_capucinus
WBGene00012105	T27F6.6	70	40.065	ENSCATG00000015266	SMPD2	81	37.883	Cercocebus_atys
WBGene00012105	T27F6.6	67	41.438	ENSCLAG00000009948	SMPD2	62	40.391	Chinchilla_lanigera
WBGene00012105	T27F6.6	75	38.855	ENSCSAG00000015322	SMPD2	80	37.465	Chlorocebus_sabaeus
WBGene00012105	T27F6.6	72	40.823	ENSCPBG00000017837	SMPD2	97	36.580	Chrysemys_picta_bellii
WBGene00012105	T27F6.6	70	40.065	ENSCANG00000029491	SMPD2	80	38.028	Colobus_angolensis_palliatus
WBGene00012105	T27F6.6	67	41.438	ENSCGRG00001019999	Smpd2	92	36.139	Cricetulus_griseus_chok1gshd
WBGene00012105	T27F6.6	67	41.438	ENSCGRG00000008928	Smpd2	92	36.139	Cricetulus_griseus_crigri
WBGene00012105	T27F6.6	70	42.105	ENSCSEG00000016030	smpd2b	91	35.867	Cynoglossus_semilaevis
WBGene00012105	T27F6.6	82	37.157	ENSCVAG00000020815	smpd2b	87	37.157	Cyprinodon_variegatus
WBGene00012105	T27F6.6	66	44.138	ENSDARG00000052701	smpd2b	90	36.973	Danio_rerio
WBGene00012105	T27F6.6	82	36.693	ENSDARG00000040523	smpd2a	89	36.973	Danio_rerio
WBGene00012105	T27F6.6	71	39.806	ENSDNOG00000003948	SMPD2	68	39.806	Dasypus_novemcinctus
WBGene00012105	T27F6.6	70	40.584	ENSDORG00000006485	Smpd2	80	38.764	Dipodomys_ordii
WBGene00012105	T27F6.6	69	36.304	FBgn0035421	CG12034	97	30.110	Drosophila_melanogaster
WBGene00012105	T27F6.6	66	42.759	ENSEBUG00000002962	smpd2b	88	37.121	Eptatretus_burgeri
WBGene00012105	T27F6.6	67	41.781	ENSEASG00005006484	SMPD2	65	41.781	Equus_asinus_asinus
WBGene00012105	T27F6.6	72	40.187	ENSECAG00000016972	SMPD2	71	40.187	Equus_caballus
WBGene00012105	T27F6.6	67	42.612	ENSELUG00000021534	smpd2b	90	35.749	Esox_lucius
WBGene00012105	T27F6.6	71	40.260	ENSFCAG00000006358	SMPD2	91	35.663	Felis_catus
WBGene00012105	T27F6.6	67	43.493	ENSFALG00000003639	SMPD2	80	40.517	Ficedula_albicollis
WBGene00012105	T27F6.6	91	36.407	ENSFHEG00000017395	smpd2b	90	36.691	Fundulus_heteroclitus
WBGene00012105	T27F6.6	67	37.543	ENSGMOG00000015239	smpd2b	66	37.543	Gadus_morhua
WBGene00012105	T27F6.6	76	41.056	ENSGALG00000033245	SMPD2	97	37.799	Gallus_gallus
WBGene00012105	T27F6.6	91	36.170	ENSGAFG00000016345	smpd2b	91	36.170	Gambusia_affinis
WBGene00012105	T27F6.6	71	40.260	ENSGACG00000005132	smpd2b	68	40.260	Gasterosteus_aculeatus
WBGene00012105	T27F6.6	71	41.883	ENSGAGG00000023942	SMPD2	87	38.441	Gopherus_agassizii
WBGene00012105	T27F6.6	70	39.739	ENSGGOG00000003394	SMPD2	91	35.961	Gorilla_gorilla
WBGene00012105	T27F6.6	67	40.956	ENSHGLG00000000226	SMPD2	65	40.956	Heterocephalus_glaber_female
WBGene00012105	T27F6.6	67	40.956	ENSHGLG00100016698	SMPD2	65	40.956	Heterocephalus_glaber_male
WBGene00012105	T27F6.6	67	43.643	ENSHCOG00000001358	smpd2b	63	43.643	Hippocampus_comes
WBGene00012105	T27F6.6	82	37.105	ENSIPUG00000017284	smpd2a	90	35.572	Ictalurus_punctatus
WBGene00012105	T27F6.6	67	44.178	ENSIPUG00000024794	smpd2b	92	36.691	Ictalurus_punctatus
WBGene00012105	T27F6.6	70	41.234	ENSSTOG00000028661	SMPD2	69	40.391	Ictidomys_tridecemlineatus
WBGene00012105	T27F6.6	67	41.980	ENSJJAG00000019368	Smpd2	71	40.252	Jaculus_jaculus
WBGene00012105	T27F6.6	81	36.053	ENSKMAG00000015753	smpd2b	87	36.053	Kryptolebias_marmoratus
WBGene00012105	T27F6.6	67	41.034	ENSLBEG00000024878	smpd2b	62	41.034	Labrus_bergylta
WBGene00012105	T27F6.6	71	40.453	ENSLACG00000016351	smpd2b	91	35.787	Latimeria_chalumnae
WBGene00012105	T27F6.6	65	43.860	ENSLOCG00000009741	smpd2b	91	36.538	Lepisosteus_oculatus
WBGene00012105	T27F6.6	71	38.511	ENSLAFG00000003298	SMPD2	69	38.511	Loxodonta_africana
WBGene00012105	T27F6.6	70	40.065	ENSMFAG00000033236	SMPD2	81	37.883	Macaca_fascicularis
WBGene00012105	T27F6.6	70	40.065	ENSMNEG00000042401	SMPD2	81	37.883	Macaca_nemestrina
WBGene00012105	T27F6.6	56	43.496	ENSMLEG00000039457	SMPD2	80	38.801	Mandrillus_leucophaeus
WBGene00012105	T27F6.6	68	40.268	ENSMAMG00000004710	smpd2b	63	40.268	Mastacembelus_armatus
WBGene00012105	T27F6.6	92	35.514	ENSMZEG00005002958	smpd2b	91	35.514	Maylandia_zebra
WBGene00012105	T27F6.6	68	44.295	ENSMGAG00000006821	SMPD2	97	37.470	Meleagris_gallopavo
WBGene00012105	T27F6.6	67	41.096	ENSMAUG00000008721	Smpd2	80	37.465	Mesocricetus_auratus
WBGene00012105	T27F6.6	67	41.438	ENSMICG00000014442	SMPD2	81	37.741	Microcebus_murinus
WBGene00012105	T27F6.6	70	40.065	ENSMOCG00000019666	Smpd2	70	40.065	Microtus_ochrogaster
WBGene00012105	T27F6.6	91	35.366	ENSMMOG00000012679	smpd2b	91	35.366	Mola_mola
WBGene00012105	T27F6.6	68	39.739	ENSMODG00000017971	SMPD2	92	34.824	Monodelphis_domestica
WBGene00012105	T27F6.6	70	41.914	ENSMALG00000000267	smpd2b	68	41.914	Monopterus_albus
WBGene00012105	T27F6.6	75	39.697	MGP_CAROLIEiJ_G0015268	Smpd2	73	39.697	Mus_caroli
WBGene00012105	T27F6.6	75	40.606	ENSMUSG00000019822	Smpd2	73	40.606	Mus_musculus
WBGene00012105	T27F6.6	75	39.091	MGP_PahariEiJ_G0030686	Smpd2	73	39.091	Mus_pahari
WBGene00012105	T27F6.6	75	40.606	MGP_SPRETEiJ_G0016077	Smpd2	73	40.606	Mus_spretus
WBGene00012105	T27F6.6	72	38.924	ENSMPUG00000010005	SMPD2	91	35.109	Mustela_putorius_furo
WBGene00012105	T27F6.6	71	39.490	ENSMLUG00000003793	SMPD2	79	37.960	Myotis_lucifugus
WBGene00012105	T27F6.6	59	43.359	ENSNGAG00000013670	Smpd2	90	44.141	Nannospalax_galili
WBGene00012105	T27F6.6	85	36.203	ENSNBRG00000008403	smpd2b	87	36.111	Neolamprologus_brichardi
WBGene00012105	T27F6.6	70	40.065	ENSNLEG00000012570	SMPD2	91	35.593	Nomascus_leucogenys
WBGene00012105	T27F6.6	59	41.085	ENSMEUG00000004602	SMPD2	91	34.878	Notamacropus_eugenii
WBGene00012105	T27F6.6	67	41.980	ENSOPRG00000012612	SMPD2	64	41.980	Ochotona_princeps
WBGene00012105	T27F6.6	92	35.514	ENSONIG00000014702	smpd2b	91	35.514	Oreochromis_niloticus
WBGene00012105	T27F6.6	67	44.027	ENSOCUG00000008607	SMPD2	79	40.909	Oryctolagus_cuniculus
WBGene00012105	T27F6.6	68	41.611	ENSORLG00000006334	smpd2b	64	41.611	Oryzias_latipes
WBGene00012105	T27F6.6	68	41.611	ENSORLG00020015231	smpd2b	64	41.611	Oryzias_latipes_hni
WBGene00012105	T27F6.6	68	41.611	ENSORLG00015010424	smpd2b	64	41.472	Oryzias_latipes_hsok
WBGene00012105	T27F6.6	91	35.238	ENSOMEG00000016121	smpd2b	91	35.238	Oryzias_melastigma
WBGene00012105	T27F6.6	91	36.430	ENSOGAG00000015505	SMPD2	92	36.430	Otolemur_garnettii
WBGene00012105	T27F6.6	56	42.105	ENSOARG00000010409	SMPD2	57	40.684	Ovis_aries
WBGene00012105	T27F6.6	70	39.739	ENSPPAG00000031363	SMPD2	91	35.714	Pan_paniscus
WBGene00012105	T27F6.6	70	40.461	ENSPPRG00000000099	SMPD2	67	40.461	Panthera_pardus
WBGene00012105	T27F6.6	69	40.594	ENSPTIG00000008954	SMPD2	91	35.854	Panthera_tigris_altaica
WBGene00012105	T27F6.6	70	39.739	ENSPTRG00000018484	SMPD2	91	35.714	Pan_troglodytes
WBGene00012105	T27F6.6	70	40.065	ENSPANG00000024480	SMPD2	81	37.883	Papio_anubis
WBGene00012105	T27F6.6	66	44.792	ENSPKIG00000011322	smpd2a	83	37.688	Paramormyrops_kingsleyae
WBGene00012105	T27F6.6	62	44.030	ENSPMGG00000000230	smpd2b	91	35.641	Periophthalmus_magnuspinnatus
WBGene00012105	T27F6.6	72	40.063	ENSPEMG00000018109	Smpd2	83	38.162	Peromyscus_maniculatus_bairdii
WBGene00012105	T27F6.6	76	39.941	ENSPMAG00000002460	smpd2b	95	39.316	Petromyzon_marinus
WBGene00012105	T27F6.6	68	41.806	ENSPCIG00000005984	SMPD2	91	37.561	Phascolarctos_cinereus
WBGene00012105	T27F6.6	91	36.170	ENSPFOG00000014164	smpd2b	91	36.170	Poecilia_formosa
WBGene00012105	T27F6.6	91	36.170	ENSPLAG00000014950	smpd2b	91	36.170	Poecilia_latipinna
WBGene00012105	T27F6.6	91	36.407	ENSPMEG00000002286	smpd2b	91	36.407	Poecilia_mexicana
WBGene00012105	T27F6.6	91	36.407	ENSPREG00000012181	smpd2b	91	36.407	Poecilia_reticulata
WBGene00012105	T27F6.6	67	41.096	ENSPPYG00000016908	-	67	35.961	Pongo_abelii
WBGene00012105	T27F6.6	70	43.042	ENSPCAG00000011808	SMPD2	69	43.042	Procavia_capensis
WBGene00012105	T27F6.6	67	42.123	ENSPCOG00000001714	SMPD2	65	42.123	Propithecus_coquereli
WBGene00012105	T27F6.6	91	36.453	ENSPVAG00000006556	SMPD2	91	36.453	Pteropus_vampyrus
WBGene00012105	T27F6.6	68	42.193	ENSPNYG00000005567	smpd2b	65	42.193	Pundamilia_nyererei
WBGene00012105	T27F6.6	67	41.438	ENSPNAG00000007986	smpd2b	91	34.426	Pygocentrus_nattereri
WBGene00012105	T27F6.6	77	38.872	ENSRNOG00000000306	Smpd2	93	34.906	Rattus_norvegicus
WBGene00012105	T27F6.6	70	40.391	ENSRBIG00000033388	SMPD2	81	38.162	Rhinopithecus_bieti
WBGene00012105	T27F6.6	70	40.065	ENSRROG00000037705	SMPD2	81	37.883	Rhinopithecus_roxellana
WBGene00012105	T27F6.6	72	38.924	ENSSBOG00000033929	SMPD2	80	37.465	Saimiri_boliviensis_boliviensis
WBGene00012105	T27F6.6	66	43.007	ENSSFOG00015022890	smpd2	86	36.203	Scleropages_formosus
WBGene00012105	T27F6.6	68	40.404	ENSSMAG00000008963	smpd2b	63	40.404	Scophthalmus_maximus
WBGene00012105	T27F6.6	68	42.230	ENSSDUG00000000098	smpd2b	92	35.047	Seriola_dumerili
WBGene00012105	T27F6.6	91	36.275	ENSSLDG00000009497	smpd2b	91	36.275	Seriola_lalandi_dorsalis
WBGene00012105	T27F6.6	72	40.248	ENSSARG00000006192	SMPD2	81	38.147	Sorex_araneus
WBGene00012105	T27F6.6	71	41.613	ENSSPUG00000013852	SMPD2	96	37.288	Sphenodon_punctatus
WBGene00012105	T27F6.6	68	40.404	ENSSPAG00000001844	smpd2b	63	40.404	Stegastes_partitus
WBGene00012105	T27F6.6	67	40.411	ENSSSCG00000004408	SMPD2	79	38.068	Sus_scrofa
WBGene00012105	T27F6.6	76	39.157	ENSTGUG00000001713	SMPD2	97	36.893	Taeniopygia_guttata
WBGene00012105	T27F6.6	91	36.386	ENSTRUG00000025701	smpd2b	92	36.386	Takifugu_rubripes
WBGene00012105	T27F6.6	82	35.385	ENSTNIG00000018297	smpd2b	94	35.385	Tetraodon_nigroviridis
WBGene00012105	T27F6.6	67	41.237	ENSTBEG00000009336	SMPD2	65	41.237	Tupaia_belangeri
WBGene00012105	T27F6.6	67	37.329	ENSTTRG00000004183	SMPD2	65	37.671	Tursiops_truncatus
WBGene00012105	T27F6.6	67	40.753	ENSUAMG00000018011	SMPD2	68	40.260	Ursus_americanus
WBGene00012105	T27F6.6	56	43.089	ENSUMAG00000025505	SMPD2	85	36.997	Ursus_maritimus
WBGene00012105	T27F6.6	81	37.875	ENSXETG00000000421	smpd2	96	36.453	Xenopus_tropicalis
WBGene00012105	T27F6.6	75	37.883	ENSXCOG00000015987	smpd2b	83	37.883	Xiphophorus_couchianus
WBGene00012105	T27F6.6	91	37.055	ENSXMAG00000018088	smpd2b	91	37.055	Xiphophorus_maculatus