EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00012904 (Gene tree)
Gene ID: -
Gene Symbol: tiar-2
Alias: -
Full Name: TIA-1/TIAL RNA binding protein homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 5218 bases
Position: chrII:12768686-12773903
Accession: Q9U2F5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y46G5A	RRM_5	PF13893.6	3.8e-08	1	1
Y46G5A	RRM_1	PF00076.22	3.9e-52	1	3
Y46G5A	RRM_1	PF00076.22	3.9e-52	2	3
Y46G5A	RRM_1	PF00076.22	3.9e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y46G5A.13	-	2042	-	Y46G5A.13	434 (aa)	NP_496718	Q9U2F5

Gene Model

Click here to download WBGene00012904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00012904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00012904	tiar-2	56	36.709	WBGene00004389	rnp-6	60	33.708
WBGene00012904	tiar-2	73	63.836	WBGene00015943	tiar-1	73	63.522
WBGene00012904	tiar-2	63	33.333	WBGene00001368	exc-7	53	41.935
WBGene00012904	tiar-2	70	42.857	WBGene00007396	tiar-3	53	42.205

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00012904	tiar-2	67	34.868	ENSCING00000002150	-	70	34.983	Ciona_intestinalis