EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00012966 (Gene tree)
Gene ID: -
Gene Symbol: exos-1
Alias: -
Full Name: EXOSome (Multiexonuclease complex) component
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1553 bases
Position: chrIII:11009043-11010595
Accession: Q9XXD2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y48A6B	ECR1_N	PF14382.6	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y48A6B.5	-	788	NM_067015	Y48A6B.5	208 (aa)	NP_499416	Q9XXD2

Gene Model

Click here to download WBGene00012966's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00012966's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00012966	exos-1	90	32.979	ENSG00000171311	EXOSC1	92	32.979	Homo_sapiens
WBGene00012966	exos-1	92	36.126	ENSAPOG00000007822	exosc1	94	36.126	Acanthochromis_polyacanthus
WBGene00012966	exos-1	90	33.511	ENSAMEG00000000129	EXOSC1	92	33.511	Ailuropoda_melanoleuca
WBGene00012966	exos-1	84	35.632	ENSACIG00000018956	exosc1	81	35.632	Amphilophus_citrinellus
WBGene00012966	exos-1	92	36.126	ENSAOCG00000010699	exosc1	94	36.126	Amphiprion_ocellaris
WBGene00012966	exos-1	84	31.609	ENSAPEG00000012690	exosc1	89	31.609	Amphiprion_percula
WBGene00012966	exos-1	92	36.126	ENSATEG00000018683	exosc1	94	36.126	Anabas_testudineus
WBGene00012966	exos-1	85	35.028	ENSACAG00000002101	EXOSC1	87	35.028	Anolis_carolinensis
WBGene00012966	exos-1	90	32.979	ENSANAG00000034669	EXOSC1	92	32.979	Aotus_nancymaae
WBGene00012966	exos-1	92	35.602	ENSACLG00000021243	exosc1	94	35.602	Astatotilapia_calliptera
WBGene00012966	exos-1	92	36.649	ENSAMXG00000011116	exosc1	94	36.649	Astyanax_mexicanus
WBGene00012966	exos-1	90	33.511	ENSBTAG00000012699	EXOSC1	92	33.511	Bos_taurus
WBGene00012966	exos-1	90	32.979	ENSCJAG00000016586	EXOSC1	92	32.979	Callithrix_jacchus
WBGene00012966	exos-1	90	32.979	ENSCAFG00000009068	EXOSC1	86	32.979	Canis_familiaris
WBGene00012966	exos-1	90	32.979	ENSCAFG00020006002	EXOSC1	86	32.979	Canis_lupus_dingo
WBGene00012966	exos-1	90	33.511	ENSCHIG00000015253	EXOSC1	92	33.511	Capra_hircus
WBGene00012966	exos-1	90	32.447	ENSTSYG00000000760	EXOSC1	92	32.447	Carlito_syrichta
WBGene00012966	exos-1	90	32.979	ENSCPOG00000001173	EXOSC1	92	32.979	Cavia_porcellus
WBGene00012966	exos-1	90	32.979	ENSCATG00000034114	EXOSC1	92	32.979	Cercocebus_atys
WBGene00012966	exos-1	90	32.979	ENSCLAG00000002463	EXOSC1	92	32.979	Chinchilla_lanigera
WBGene00012966	exos-1	90	33.511	ENSCSAG00000005870	EXOSC1	92	33.511	Chlorocebus_sabaeus
WBGene00012966	exos-1	52	30.556	ENSCPBG00000011949	EXOSC1	83	30.556	Chrysemys_picta_bellii
WBGene00012966	exos-1	83	32.584	ENSCING00000022734	-	78	32.584	Ciona_intestinalis
WBGene00012966	exos-1	95	31.000	ENSCSAVG00000010865	-	96	31.000	Ciona_savignyi
WBGene00012966	exos-1	90	32.979	ENSCANG00000034159	EXOSC1	92	32.979	Colobus_angolensis_palliatus
WBGene00012966	exos-1	90	32.447	ENSCGRG00001000335	Exosc1	92	32.447	Cricetulus_griseus_chok1gshd
WBGene00012966	exos-1	90	32.447	ENSCGRG00000011602	Exosc1	92	32.447	Cricetulus_griseus_crigri
WBGene00012966	exos-1	92	35.079	ENSCVAG00000016748	exosc1	94	35.079	Cyprinodon_variegatus
WBGene00012966	exos-1	92	36.126	ENSDARG00000059841	exosc1	94	36.126	Danio_rerio
WBGene00012966	exos-1	71	31.973	ENSDNOG00000007983	EXOSC1	94	31.973	Dasypus_novemcinctus
WBGene00012966	exos-1	90	32.447	ENSDORG00000016528	Exosc1	92	32.447	Dipodomys_ordii
WBGene00012966	exos-1	98	33.971	FBgn0032346	Csl4	95	33.971	Drosophila_melanogaster
WBGene00012966	exos-1	90	31.915	ENSETEG00000002469	-	92	31.915	Echinops_telfairi
WBGene00012966	exos-1	90	32.447	ENSEEUG00000005647	EXOSC1	92	32.447	Erinaceus_europaeus
WBGene00012966	exos-1	91	35.263	ENSELUG00000017369	exosc1	80	35.263	Esox_lucius
WBGene00012966	exos-1	90	33.511	ENSFCAG00000040563	EXOSC1	86	33.511	Felis_catus
WBGene00012966	exos-1	91	36.126	ENSFALG00000008450	EXOSC1	93	36.126	Ficedula_albicollis
WBGene00012966	exos-1	90	32.979	ENSFDAG00000000846	EXOSC1	92	32.979	Fukomys_damarensis
WBGene00012966	exos-1	92	34.031	ENSFHEG00000009154	exosc1	94	34.031	Fundulus_heteroclitus
WBGene00012966	exos-1	92	36.649	ENSGMOG00000008993	exosc1	94	36.649	Gadus_morhua
WBGene00012966	exos-1	63	36.842	ENSGALG00000039917	EXOSC1	90	36.842	Gallus_gallus
WBGene00012966	exos-1	92	35.079	ENSGAFG00000010265	exosc1	89	35.079	Gambusia_affinis
WBGene00012966	exos-1	92	34.555	ENSGACG00000018936	exosc1	94	34.555	Gasterosteus_aculeatus
WBGene00012966	exos-1	90	34.043	ENSGAGG00000019192	EXOSC1	92	34.043	Gopherus_agassizii
WBGene00012966	exos-1	92	35.602	ENSHBUG00000017857	exosc1	94	35.602	Haplochromis_burtoni
WBGene00012966	exos-1	90	32.979	ENSHGLG00000016927	EXOSC1	92	32.979	Heterocephalus_glaber_female
WBGene00012966	exos-1	90	32.979	ENSHGLG00100012208	EXOSC1	92	32.979	Heterocephalus_glaber_male
WBGene00012966	exos-1	92	35.602	ENSHCOG00000019882	exosc1	94	35.602	Hippocampus_comes
WBGene00012966	exos-1	92	35.602	ENSIPUG00000007685	exosc1	94	35.602	Ictalurus_punctatus
WBGene00012966	exos-1	90	32.447	ENSSTOG00000006615	EXOSC1	92	32.447	Ictidomys_tridecemlineatus
WBGene00012966	exos-1	90	33.511	ENSJJAG00000013311	Exosc1	92	33.511	Jaculus_jaculus
WBGene00012966	exos-1	92	35.052	ENSKMAG00000001202	exosc1	77	35.052	Kryptolebias_marmoratus
WBGene00012966	exos-1	92	36.126	ENSLBEG00000011448	exosc1	94	36.126	Labrus_bergylta
WBGene00012966	exos-1	94	30.049	ENSLOCG00000003776	exosc1	96	30.049	Lepisosteus_oculatus
WBGene00012966	exos-1	90	32.979	ENSLAFG00000015983	EXOSC1	92	32.979	Loxodonta_africana
WBGene00012966	exos-1	90	32.979	ENSMFAG00000001493	EXOSC1	92	32.979	Macaca_fascicularis
WBGene00012966	exos-1	90	33.333	ENSMMUG00000020028	EXOSC1	92	33.333	Macaca_mulatta
WBGene00012966	exos-1	90	32.979	ENSMNEG00000029816	EXOSC1	92	32.979	Macaca_nemestrina
WBGene00012966	exos-1	90	32.447	ENSMLEG00000027643	EXOSC1	92	32.447	Mandrillus_leucophaeus
WBGene00012966	exos-1	92	35.602	ENSMAMG00000012200	exosc1	94	35.602	Mastacembelus_armatus
WBGene00012966	exos-1	92	35.602	ENSMZEG00005007042	exosc1	94	35.602	Maylandia_zebra
WBGene00012966	exos-1	90	32.979	ENSMICG00000007664	EXOSC1	85	32.979	Microcebus_murinus
WBGene00012966	exos-1	90	32.447	ENSMOCG00000006004	-	92	32.447	Microtus_ochrogaster
WBGene00012966	exos-1	84	32.184	ENSMOCG00000017124	-	84	32.184	Microtus_ochrogaster
WBGene00012966	exos-1	90	32.275	ENSMODG00000004213	EXOSC1	92	32.275	Monodelphis_domestica
WBGene00012966	exos-1	90	35.829	ENSMALG00000007061	exosc1	89	35.829	Monopterus_albus
WBGene00012966	exos-1	90	32.979	MGP_CAROLIEiJ_G0022959	Exosc1	92	32.979	Mus_caroli
WBGene00012966	exos-1	90	32.979	ENSMUSG00000034321	Exosc1	92	32.979	Mus_musculus
WBGene00012966	exos-1	90	32.447	MGP_PahariEiJ_G0014449	Exosc1	92	32.447	Mus_pahari
WBGene00012966	exos-1	90	32.979	MGP_SPRETEiJ_G0023880	Exosc1	92	32.979	Mus_spretus
WBGene00012966	exos-1	90	33.511	ENSMPUG00000017044	EXOSC1	92	33.511	Mustela_putorius_furo
WBGene00012966	exos-1	90	32.979	ENSMLUG00000009228	EXOSC1	92	32.979	Myotis_lucifugus
WBGene00012966	exos-1	90	32.447	ENSNGAG00000022033	Exosc1	92	32.447	Nannospalax_galili
WBGene00012966	exos-1	90	32.979	ENSNLEG00000013872	EXOSC1	92	32.979	Nomascus_leucogenys
WBGene00012966	exos-1	90	33.511	ENSOPRG00000005065	EXOSC1	92	33.511	Ochotona_princeps
WBGene00012966	exos-1	90	32.979	ENSODEG00000016709	EXOSC1	92	32.979	Octodon_degus
WBGene00012966	exos-1	92	35.079	ENSONIG00000017683	exosc1	93	35.079	Oreochromis_niloticus
WBGene00012966	exos-1	52	33.945	ENSOANG00000006563	EXOSC1	93	32.203	Ornithorhynchus_anatinus
WBGene00012966	exos-1	90	32.275	ENSOCUG00000011898	-	92	32.275	Oryctolagus_cuniculus
WBGene00012966	exos-1	92	33.854	ENSORLG00000011595	exosc1	94	33.854	Oryzias_latipes
WBGene00012966	exos-1	92	33.854	ENSORLG00020005831	exosc1	94	33.854	Oryzias_latipes_hni
WBGene00012966	exos-1	92	33.854	ENSORLG00015004317	exosc1	94	33.854	Oryzias_latipes_hsok
WBGene00012966	exos-1	92	30.366	ENSOMEG00000013907	exosc1	93	30.366	Oryzias_melastigma
WBGene00012966	exos-1	90	33.511	ENSOGAG00000016259	EXOSC1	92	33.511	Otolemur_garnettii
WBGene00012966	exos-1	90	33.511	ENSOARG00000010136	EXOSC1	92	33.511	Ovis_aries
WBGene00012966	exos-1	90	32.984	ENSPPAG00000039842	EXOSC1	92	32.984	Pan_paniscus
WBGene00012966	exos-1	90	33.511	ENSPPRG00000023366	EXOSC1	92	33.511	Panthera_pardus
WBGene00012966	exos-1	90	33.511	ENSPTIG00000017701	EXOSC1	92	33.511	Panthera_tigris_altaica
WBGene00012966	exos-1	90	32.979	ENSPTRG00000002808	EXOSC1	92	32.979	Pan_troglodytes
WBGene00012966	exos-1	90	32.979	ENSPANG00000021324	EXOSC1	92	32.979	Papio_anubis
WBGene00012966	exos-1	94	35.714	ENSPKIG00000016037	exosc1	96	35.714	Paramormyrops_kingsleyae
WBGene00012966	exos-1	63	35.878	ENSPSIG00000013571	EXOSC1	94	32.203	Pelodiscus_sinensis
WBGene00012966	exos-1	90	32.447	ENSPEMG00000010710	-	92	32.447	Peromyscus_maniculatus_bairdii
WBGene00012966	exos-1	90	34.392	ENSPMAG00000000195	exosc1	92	34.392	Petromyzon_marinus
WBGene00012966	exos-1	90	31.915	ENSPCIG00000002210	EXOSC1	91	31.915	Phascolarctos_cinereus
WBGene00012966	exos-1	92	35.602	ENSPFOG00000006755	exosc1	89	35.602	Poecilia_formosa
WBGene00012966	exos-1	92	35.602	ENSPLAG00000005880	exosc1	94	35.602	Poecilia_latipinna
WBGene00012966	exos-1	92	35.602	ENSPMEG00000015598	exosc1	89	35.602	Poecilia_mexicana
WBGene00012966	exos-1	90	32.979	ENSPPYG00000002531	EXOSC1	92	32.979	Pongo_abelii
WBGene00012966	exos-1	90	32.979	ENSPCAG00000009135	EXOSC1	92	32.979	Procavia_capensis
WBGene00012966	exos-1	90	31.383	ENSPCOG00000027539	EXOSC1	91	31.383	Propithecus_coquereli
WBGene00012966	exos-1	90	32.979	ENSPVAG00000003372	EXOSC1	92	32.979	Pteropus_vampyrus
WBGene00012966	exos-1	92	35.602	ENSPNYG00000021745	exosc1	94	35.602	Pundamilia_nyererei
WBGene00012966	exos-1	92	36.126	ENSPNAG00000001944	exosc1	94	36.126	Pygocentrus_nattereri
WBGene00012966	exos-1	90	32.447	ENSRNOG00000048708	Exosc1	92	32.447	Rattus_norvegicus
WBGene00012966	exos-1	90	32.979	ENSRBIG00000035618	EXOSC1	92	32.979	Rhinopithecus_bieti
WBGene00012966	exos-1	90	32.979	ENSRROG00000032589	EXOSC1	85	32.979	Rhinopithecus_roxellana
WBGene00012966	exos-1	90	32.979	ENSSBOG00000000359	EXOSC1	92	32.979	Saimiri_boliviensis_boliviensis
WBGene00012966	exos-1	68	35.211	ENSSHAG00000018219	EXOSC1	94	35.211	Sarcophilus_harrisii
WBGene00012966	exos-1	92	34.031	ENSSFOG00015016289	-	94	34.031	Scleropages_formosus
WBGene00012966	exos-1	92	35.602	ENSSFOG00015009069	exosc1	94	35.602	Scleropages_formosus
WBGene00012966	exos-1	92	36.126	ENSSMAG00000003721	exosc1	94	36.126	Scophthalmus_maximus
WBGene00012966	exos-1	92	36.649	ENSSDUG00000002993	exosc1	94	36.649	Seriola_dumerili
WBGene00012966	exos-1	92	36.649	ENSSLDG00000025181	exosc1	94	36.649	Seriola_lalandi_dorsalis
WBGene00012966	exos-1	91	37.696	ENSSPUG00000012263	EXOSC1	93	37.696	Sphenodon_punctatus
WBGene00012966	exos-1	92	31.937	ENSSPAG00000016792	exosc1	77	31.937	Stegastes_partitus
WBGene00012966	exos-1	90	34.043	ENSSSCG00000010518	EXOSC1	84	34.043	Sus_scrofa
WBGene00012966	exos-1	89	36.559	ENSTGUG00000009692	EXOSC1	92	36.559	Taeniopygia_guttata
WBGene00012966	exos-1	92	34.031	ENSTRUG00000007706	exosc1	94	34.031	Takifugu_rubripes
WBGene00012966	exos-1	95	32.836	ENSTNIG00000014079	exosc1	97	32.836	Tetraodon_nigroviridis
WBGene00012966	exos-1	90	32.447	ENSTBEG00000006011	EXOSC1	92	32.447	Tupaia_belangeri
WBGene00012966	exos-1	84	34.483	ENSTTRG00000009887	EXOSC1	90	34.483	Tursiops_truncatus
WBGene00012966	exos-1	90	30.102	ENSUAMG00000010266	EXOSC1	91	30.102	Ursus_americanus
WBGene00012966	exos-1	90	30.102	ENSUMAG00000022002	EXOSC1	91	30.102	Ursus_maritimus
WBGene00012966	exos-1	90	32.979	ENSVVUG00000023192	EXOSC1	58	32.979	Vulpes_vulpes
WBGene00012966	exos-1	90	35.450	ENSXETG00000003434	exosc1	92	35.450	Xenopus_tropicalis
WBGene00012966	exos-1	55	33.913	ENSXCOG00000014499	exosc1	88	33.913	Xiphophorus_couchianus