EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00013026 (Gene tree)
Gene ID: -
Gene Symbol: Y49A3A.3
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1345 bases
Position: chrV:14354410-14355754
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y49A3A	TRM13	PF05206.14	9e-50	1	1
Y49A3A	zf-U11-48K	PF05253.12	2.8e-06	1	1
Y49A3A	zf-TRM13_CCCH	PF11722.8	8.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y49A3A.3	-	1257	NM_074159	Y49A3A.3	390 (aa)	NP_506560	Q9XW93

Gene Model

Click here to download WBGene00013026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00013026's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00013026	Y49A3A.3	64	32.319	ENSCAFG00020011572	TRMT13	88	32.319	Canis_lupus_dingo
WBGene00013026	Y49A3A.3	96	30.918	ENSCSEG00000000591	trmt13	95	30.918	Cynoglossus_semilaevis
WBGene00013026	Y49A3A.3	64	31.061	ENSDNOG00000001710	TRMT13	79	31.061	Dasypus_novemcinctus
WBGene00013026	Y49A3A.3	67	32.364	ENSFHEG00000022954	trmt13	66	32.364	Fundulus_heteroclitus
WBGene00013026	Y49A3A.3	64	30.000	ENSGAFG00000001577	trmt13	78	30.000	Gambusia_affinis
WBGene00013026	Y49A3A.3	64	30.798	ENSGAGG00000023303	TRMT13	92	30.798	Gopherus_agassizii
WBGene00013026	Y49A3A.3	97	30.861	ENSHCOG00000020553	trmt13	96	30.861	Hippocampus_comes
WBGene00013026	Y49A3A.3	64	33.463	ENSIPUG00000024787	trmt13	87	33.463	Ictalurus_punctatus
WBGene00013026	Y49A3A.3	64	30.566	MGP_CAROLIEiJ_G0025568	Trmt13	100	39.683	Mus_caroli
WBGene00013026	Y49A3A.3	64	30.943	ENSMUSG00000033439	Trmt13	87	30.943	Mus_musculus
WBGene00013026	Y49A3A.3	64	30.943	MGP_PahariEiJ_G0027014	Trmt13	79	44.000	Mus_pahari
WBGene00013026	Y49A3A.3	64	30.943	MGP_SPRETEiJ_G0026518	Trmt13	87	30.943	Mus_spretus
WBGene00013026	Y49A3A.3	64	30.534	ENSOPRG00000012048	TRMT13	53	30.534	Ochotona_princeps
WBGene00013026	Y49A3A.3	67	31.502	ENSPANG00000007598	TRMT13	59	45.312	Papio_anubis
WBGene00013026	Y49A3A.3	69	30.034	ENSPREG00000005645	trmt13	95	30.034	Poecilia_reticulata