EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00013143 (Gene tree)
Gene ID: -
Gene Symbol: Y53C12B.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3093 bases
Position: chrII:9742982-9746074
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y53C12B	Utp13	PF08625.11	3.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y53C12B.1	-	2538	NM_063699	Y53C12B.1	793 (aa)	NP_496100	O18215

Gene Model

Click here to download WBGene00013143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00013143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00013143	Y53C12B.1	67	30.178	WBGene00006474	wdr-5.1	81	30.178
WBGene00013143	Y53C12B.1	68	35.366	WBGene00013862	wdr-5.3	60	35.366

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00013143	Y53C12B.1	99	31.219	ENSG00000183751	TBL3	96	31.927	Homo_sapiens
WBGene00013143	Y53C12B.1	99	31.288	ENSAPOG00000021308	tbl3	85	31.288	Acanthochromis_polyacanthus
WBGene00013143	Y53C12B.1	99	30.683	ENSAMEG00000017654	TBL3	97	30.683	Ailuropoda_melanoleuca
WBGene00013143	Y53C12B.1	98	31.605	ENSACIG00000007459	tbl3	97	31.605	Amphilophus_citrinellus
WBGene00013143	Y53C12B.1	99	31.411	ENSAOCG00000000453	tbl3	85	31.411	Amphiprion_ocellaris
WBGene00013143	Y53C12B.1	99	31.411	ENSAPEG00000010228	tbl3	98	31.411	Amphiprion_percula
WBGene00013143	Y53C12B.1	99	31.373	ENSATEG00000024571	tbl3	91	31.720	Anabas_testudineus
WBGene00013143	Y53C12B.1	92	31.952	ENSAPLG00000008515	TBL3	98	31.952	Anas_platyrhynchos
WBGene00013143	Y53C12B.1	99	31.172	ENSANAG00000030472	TBL3	97	31.172	Aotus_nancymaae
WBGene00013143	Y53C12B.1	99	31.695	ENSACLG00000027954	tbl3	90	32.917	Astatotilapia_calliptera
WBGene00013143	Y53C12B.1	99	31.728	ENSAMXG00000042589	tbl3	85	31.728	Astyanax_mexicanus
WBGene00013143	Y53C12B.1	99	32.040	ENSBTAG00000020366	TBL3	95	32.040	Bos_taurus
WBGene00013143	Y53C12B.1	99	31.172	ENSCJAG00000015245	TBL3	96	31.172	Callithrix_jacchus
WBGene00013143	Y53C12B.1	99	31.119	ENSCAFG00000019430	TBL3	96	40.458	Canis_familiaris
WBGene00013143	Y53C12B.1	99	31.196	ENSCAFG00020026321	TBL3	98	31.196	Canis_lupus_dingo
WBGene00013143	Y53C12B.1	99	31.790	ENSCHIG00000007747	TBL3	95	31.790	Capra_hircus
WBGene00013143	Y53C12B.1	99	31.925	ENSTSYG00000036142	TBL3	96	31.925	Carlito_syrichta
WBGene00013143	Y53C12B.1	99	32.090	ENSCPOG00000005998	TBL3	97	32.090	Cavia_porcellus
WBGene00013143	Y53C12B.1	99	31.047	ENSCCAG00000034486	TBL3	96	31.047	Cebus_capucinus
WBGene00013143	Y53C12B.1	99	31.219	ENSCATG00000031298	TBL3	96	31.219	Cercocebus_atys
WBGene00013143	Y53C12B.1	99	32.005	ENSCLAG00000013342	TBL3	97	32.005	Chinchilla_lanigera
WBGene00013143	Y53C12B.1	99	30.721	ENSCSAG00000011191	TBL3	96	30.721	Chlorocebus_sabaeus
WBGene00013143	Y53C12B.1	99	32.346	ENSCPBG00000000253	TBL3	96	32.346	Chrysemys_picta_bellii
WBGene00013143	Y53C12B.1	98	30.549	ENSCING00000009521	-	97	30.549	Ciona_intestinalis
WBGene00013143	Y53C12B.1	99	30.970	ENSCANG00000031169	TBL3	96	30.970	Colobus_angolensis_palliatus
WBGene00013143	Y53C12B.1	99	31.638	ENSCGRG00001021817	Tbl3	97	31.638	Cricetulus_griseus_chok1gshd
WBGene00013143	Y53C12B.1	99	31.638	ENSCGRG00000013364	Tbl3	97	31.638	Cricetulus_griseus_crigri
WBGene00013143	Y53C12B.1	99	31.740	ENSCSEG00000015634	tbl3	97	31.177	Cynoglossus_semilaevis
WBGene00013143	Y53C12B.1	99	31.902	ENSCVAG00000002720	tbl3	93	33.471	Cyprinodon_variegatus
WBGene00013143	Y53C12B.1	99	31.336	ENSDORG00000007377	Tbl3	96	31.336	Dipodomys_ordii
WBGene00013143	Y53C12B.1	87	38.186	ENSETEG00000019403	TBL3	82	38.186	Echinops_telfairi
WBGene00013143	Y53C12B.1	99	33.663	ENSEBUG00000003526	tbl3	90	33.663	Eptatretus_burgeri
WBGene00013143	Y53C12B.1	99	31.086	ENSEASG00005004649	TBL3	96	31.086	Equus_asinus_asinus
WBGene00013143	Y53C12B.1	99	30.961	ENSECAG00000019299	TBL3	96	30.961	Equus_caballus
WBGene00013143	Y53C12B.1	60	35.565	ENSEEUG00000000761	-	59	35.699	Erinaceus_europaeus
WBGene00013143	Y53C12B.1	99	36.496	ENSELUG00000007394	tbl3	97	36.496	Esox_lucius
WBGene00013143	Y53C12B.1	99	30.722	ENSFCAG00000011740	TBL3	99	30.722	Felis_catus
WBGene00013143	Y53C12B.1	99	31.481	ENSFALG00000003409	TBL3	96	31.481	Ficedula_albicollis
WBGene00013143	Y53C12B.1	99	31.756	ENSFDAG00000007751	TBL3	97	31.756	Fukomys_damarensis
WBGene00013143	Y53C12B.1	99	31.902	ENSFHEG00000002234	tbl3	85	31.902	Fundulus_heteroclitus
WBGene00013143	Y53C12B.1	99	38.403	ENSGMOG00000011562	tbl3	89	38.403	Gadus_morhua
WBGene00013143	Y53C12B.1	99	32.108	ENSGALG00000005558	TBL3	97	32.108	Gallus_gallus
WBGene00013143	Y53C12B.1	99	32.108	ENSGAFG00000020165	tbl3	86	32.025	Gambusia_affinis
WBGene00013143	Y53C12B.1	99	31.174	ENSGACG00000011960	tbl3	98	31.174	Gasterosteus_aculeatus
WBGene00013143	Y53C12B.1	99	32.469	ENSGAGG00000024028	TBL3	96	32.469	Gopherus_agassizii
WBGene00013143	Y53C12B.1	99	31.219	ENSGGOG00000009378	TBL3	96	31.219	Gorilla_gorilla
WBGene00013143	Y53C12B.1	99	31.941	ENSHBUG00000011872	tbl3	97	32.068	Haplochromis_burtoni
WBGene00013143	Y53C12B.1	99	31.756	ENSHGLG00000002431	TBL3	97	31.756	Heterocephalus_glaber_female
WBGene00013143	Y53C12B.1	99	31.507	ENSHGLG00100012878	TBL3	97	31.507	Heterocephalus_glaber_male
WBGene00013143	Y53C12B.1	99	31.373	ENSHCOG00000016689	tbl3	85	31.373	Hippocampus_comes
WBGene00013143	Y53C12B.1	98	31.656	ENSIPUG00000003568	TBL3	85	31.656	Ictalurus_punctatus
WBGene00013143	Y53C12B.1	99	31.382	ENSSTOG00000012964	TBL3	97	31.382	Ictidomys_tridecemlineatus
WBGene00013143	Y53C12B.1	99	31.390	ENSJJAG00000004124	Tbl3	97	31.390	Jaculus_jaculus
WBGene00013143	Y53C12B.1	99	31.204	ENSKMAG00000020117	tbl3	93	32.645	Kryptolebias_marmoratus
WBGene00013143	Y53C12B.1	98	31.946	ENSLBEG00000026742	tbl3	84	32.025	Labrus_bergylta
WBGene00013143	Y53C12B.1	99	30.694	ENSLACG00000000615	TBL3	98	30.694	Latimeria_chalumnae
WBGene00013143	Y53C12B.1	98	31.026	ENSLOCG00000008853	tbl3	84	31.026	Lepisosteus_oculatus
WBGene00013143	Y53C12B.1	99	30.137	ENSLAFG00000004699	TBL3	97	30.137	Loxodonta_africana
WBGene00013143	Y53C12B.1	99	30.970	ENSMFAG00000030302	TBL3	96	30.970	Macaca_fascicularis
WBGene00013143	Y53C12B.1	99	30.970	ENSMMUG00000007943	TBL3	97	30.970	Macaca_mulatta
WBGene00013143	Y53C12B.1	99	30.731	ENSMNEG00000032603	TBL3	96	30.731	Macaca_nemestrina
WBGene00013143	Y53C12B.1	99	31.095	ENSMLEG00000043359	TBL3	98	31.095	Mandrillus_leucophaeus
WBGene00013143	Y53C12B.1	99	32.436	ENSMAMG00000023507	tbl3	84	32.313	Mastacembelus_armatus
WBGene00013143	Y53C12B.1	99	31.818	ENSMZEG00005000630	tbl3	89	33.056	Maylandia_zebra
WBGene00013143	Y53C12B.1	99	31.941	ENSMGAG00000005694	TBL3	97	31.941	Meleagris_gallopavo
WBGene00013143	Y53C12B.1	99	31.638	ENSMAUG00000008718	Tbl3	97	31.638	Mesocricetus_auratus
WBGene00013143	Y53C12B.1	99	30.961	ENSMICG00000012787	TBL3	85	30.961	Microcebus_murinus
WBGene00013143	Y53C12B.1	99	31.540	ENSMOCG00000019634	Tbl3	99	31.540	Microtus_ochrogaster
WBGene00013143	Y53C12B.1	99	32.353	ENSMMOG00000007551	tbl3	99	32.353	Mola_mola
WBGene00013143	Y53C12B.1	99	32.422	ENSMODG00000016091	TBL3	97	32.422	Monodelphis_domestica
WBGene00013143	Y53C12B.1	98	31.365	ENSMALG00000007013	tbl3	84	31.599	Monopterus_albus
WBGene00013143	Y53C12B.1	99	31.756	MGP_CAROLIEiJ_G0021199	Tbl3	97	31.756	Mus_caroli
WBGene00013143	Y53C12B.1	99	31.631	ENSMUSG00000040688	Tbl3	99	40.667	Mus_musculus
WBGene00013143	Y53C12B.1	99	31.756	MGP_PahariEiJ_G0023516	Tbl3	97	31.756	Mus_pahari
WBGene00013143	Y53C12B.1	99	31.631	MGP_SPRETEiJ_G0022110	Tbl3	99	40.667	Mus_spretus
WBGene00013143	Y53C12B.1	99	30.835	ENSMPUG00000015545	TBL3	98	30.835	Mustela_putorius_furo
WBGene00013143	Y53C12B.1	99	31.586	ENSMLUG00000011684	TBL3	97	31.586	Myotis_lucifugus
WBGene00013143	Y53C12B.1	99	31.801	ENSNGAG00000002428	Tbl3	97	31.801	Nannospalax_galili
WBGene00013143	Y53C12B.1	99	30.398	ENSNBRG00000003173	tbl3	97	30.398	Neolamprologus_brichardi
WBGene00013143	Y53C12B.1	99	31.343	ENSNLEG00000008889	TBL3	96	31.343	Nomascus_leucogenys
WBGene00013143	Y53C12B.1	87	40.157	ENSMEUG00000004011	TBL3	86	40.157	Notamacropus_eugenii
WBGene00013143	Y53C12B.1	96	30.013	ENSOPRG00000002527	-	95	30.013	Ochotona_princeps
WBGene00013143	Y53C12B.1	99	32.503	ENSODEG00000013930	TBL3	98	32.503	Octodon_degus
WBGene00013143	Y53C12B.1	99	32.187	ENSONIG00000002319	tbl3	97	32.187	Oreochromis_niloticus
WBGene00013143	Y53C12B.1	99	31.746	ENSORLG00000009312	tbl3	93	31.824	Oryzias_latipes
WBGene00013143	Y53C12B.1	99	31.868	ENSORLG00020017711	tbl3	93	31.946	Oryzias_latipes_hni
WBGene00013143	Y53C12B.1	99	31.663	ENSORLG00015007004	tbl3	85	31.785	Oryzias_latipes_hsok
WBGene00013143	Y53C12B.1	99	31.740	ENSOMEG00000012684	tbl3	95	31.373	Oryzias_melastigma
WBGene00013143	Y53C12B.1	99	30.462	ENSOGAG00000010104	TBL3	97	30.462	Otolemur_garnettii
WBGene00013143	Y53C12B.1	76	31.068	ENSOARG00000017059	TBL3	93	31.068	Ovis_aries
WBGene00013143	Y53C12B.1	99	31.095	ENSPPAG00000041939	TBL3	96	31.095	Pan_paniscus
WBGene00013143	Y53C12B.1	99	30.845	ENSPPRG00000000893	TBL3	99	30.845	Panthera_pardus
WBGene00013143	Y53C12B.1	59	36.695	ENSPTIG00000010377	TBL3	76	36.695	Panthera_tigris_altaica
WBGene00013143	Y53C12B.1	99	31.095	ENSPTRG00000007621	TBL3	96	31.095	Pan_troglodytes
WBGene00013143	Y53C12B.1	99	31.219	ENSPANG00000007024	TBL3	96	31.219	Papio_anubis
WBGene00013143	Y53C12B.1	99	30.627	ENSPKIG00000000136	tbl3	87	30.627	Paramormyrops_kingsleyae
WBGene00013143	Y53C12B.1	99	31.980	ENSPSIG00000013024	TBL3	96	32.064	Pelodiscus_sinensis
WBGene00013143	Y53C12B.1	99	31.592	ENSPMGG00000020660	tbl3	96	31.592	Periophthalmus_magnuspinnatus
WBGene00013143	Y53C12B.1	99	32.379	ENSPEMG00000009768	Tbl3	98	32.335	Peromyscus_maniculatus_bairdii
WBGene00013143	Y53C12B.1	85	31.354	ENSPMAG00000004860	tbl3	93	31.989	Petromyzon_marinus
WBGene00013143	Y53C12B.1	99	31.801	ENSPCIG00000021811	TBL3	96	31.801	Phascolarctos_cinereus
WBGene00013143	Y53C12B.1	99	32.475	ENSPFOG00000009834	tbl3	85	32.475	Poecilia_formosa
WBGene00013143	Y53C12B.1	99	32.475	ENSPLAG00000016437	tbl3	85	32.475	Poecilia_latipinna
WBGene00013143	Y53C12B.1	99	32.475	ENSPMEG00000019513	tbl3	85	32.475	Poecilia_mexicana
WBGene00013143	Y53C12B.1	99	31.095	ENSPPYG00000006977	TBL3	96	31.095	Pongo_abelii
WBGene00013143	Y53C12B.1	99	30.712	ENSPCOG00000019749	TBL3	96	30.712	Propithecus_coquereli
WBGene00013143	Y53C12B.1	99	31.796	ENSPVAG00000016710	TBL3	97	31.796	Pteropus_vampyrus
WBGene00013143	Y53C12B.1	86	32.168	ENSPNYG00000017137	tbl3	90	32.168	Pundamilia_nyererei
WBGene00013143	Y53C12B.1	99	31.852	ENSPNAG00000017527	tbl3	98	31.461	Pygocentrus_nattereri
WBGene00013143	Y53C12B.1	99	32.379	ENSRNOG00000013429	Tbl3	97	32.379	Rattus_norvegicus
WBGene00013143	Y53C12B.1	99	30.721	ENSRROG00000026697	TBL3	96	30.721	Rhinopithecus_roxellana
WBGene00013143	Y53C12B.1	99	30.923	ENSSBOG00000013923	TBL3	96	30.923	Saimiri_boliviensis_boliviensis
WBGene00013143	Y53C12B.1	98	31.841	ENSSHAG00000015266	TBL3	96	31.841	Sarcophilus_harrisii
WBGene00013143	Y53C12B.1	99	30.270	ENSSFOG00015023537	tbl3	84	30.270	Scleropages_formosus
WBGene00013143	Y53C12B.1	99	32.459	ENSSMAG00000014338	tbl3	97	32.459	Scophthalmus_maximus
WBGene00013143	Y53C12B.1	98	31.579	ENSSDUG00000008158	tbl3	84	31.579	Seriola_dumerili
WBGene00013143	Y53C12B.1	98	32.230	ENSSLDG00000023733	tbl3	97	31.663	Seriola_lalandi_dorsalis
WBGene00013143	Y53C12B.1	69	36.320	ENSSPUG00000012939	TBL3	85	36.320	Sphenodon_punctatus
WBGene00013143	Y53C12B.1	99	31.669	ENSSPAG00000010659	tbl3	85	31.669	Stegastes_partitus
WBGene00013143	Y53C12B.1	99	31.461	ENSSSCG00000037686	TBL3	97	31.461	Sus_scrofa
WBGene00013143	Y53C12B.1	99	31.343	ENSTGUG00000006592	-	99	31.343	Taeniopygia_guttata
WBGene00013143	Y53C12B.1	99	32.073	ENSTRUG00000007010	tbl3	86	31.324	Takifugu_rubripes
WBGene00013143	Y53C12B.1	99	32.426	ENSTNIG00000018011	tbl3	97	32.258	Tetraodon_nigroviridis
WBGene00013143	Y53C12B.1	52	43.421	ENSTBEG00000000017	-	50	43.421	Tupaia_belangeri
WBGene00013143	Y53C12B.1	99	31.000	ENSTTRG00000011395	TBL3	96	31.000	Tursiops_truncatus
WBGene00013143	Y53C12B.1	99	30.637	ENSUAMG00000019276	TBL3	98	30.637	Ursus_americanus
WBGene00013143	Y53C12B.1	99	30.250	ENSUMAG00000022149	TBL3	96	30.250	Ursus_maritimus
WBGene00013143	Y53C12B.1	99	30.958	ENSVVUG00000009589	TBL3	98	30.958	Vulpes_vulpes
WBGene00013143	Y53C12B.1	99	30.920	ENSXETG00000007217	tbl3	94	30.920	Xenopus_tropicalis
WBGene00013143	Y53C12B.1	99	31.985	ENSXCOG00000010277	tbl3	98	31.985	Xiphophorus_couchianus
WBGene00013143	Y53C12B.1	99	32.025	ENSXMAG00000014866	tbl3	91	32.595	Xiphophorus_maculatus