EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: WBGene00013319 (Gene tree)
Gene ID: -
Gene Symbol: ccch-5
Alias: -
Full Name: CCCH-type zinc finger putative transcription factor
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 812 bases
Position: chrIV:14919610-14920421
Accession: O18251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y57G11C	zf-CCCH	PF00642.24	2.3e-22	1	2
Y57G11C	zf-CCCH	PF00642.24	2.3e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y57G11C.25	-	759	NM_070404	Y57G11C.25	199 (aa)	NP_502805	O18251

Gene Model

Click here to download WBGene00013319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00013319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00013319	ccch-5	58	46.457	WBGene00009539	F38C2.7	62	46.457
WBGene00013319	ccch-5	85	75.706	WBGene00009537	ccch-2	98	73.822
WBGene00013319	ccch-5	54	55.455	WBGene00013796	Y116A8C.19	60	51.613
WBGene00013319	ccch-5	55	48.760	WBGene00007961	C35D6.4	59	48.760
WBGene00013319	ccch-5	54	48.333	WBGene00013370	Y60A9.3	58	48.333
WBGene00013319	ccch-5	65	54.795	WBGene00004078	pos-1	55	54.795