EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00013983 (Gene tree)
Gene ID: -
Gene Symbol: ZK512.2
Alias: -
Full Name: Probable ATP-dependent RNA helicase DDX55 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3006 bases
Position: chrIII:9141789-9144794
Accession: P34640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ZK512	ResIII	PF04851.15	1.6e-11	1	1
ZK512	ResIII	PF04851.15	4.8e-06	1	1
ZK512	DEAD	PF00270.29	9.3e-37	1	1
ZK512	DEAD	PF00270.29	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ZK512.2a	-	1867	NM_001268051	ZK512.2a	578 (aa)	NP_001254980	P34640
ZK512.2b	-	1751	NM_001268052	ZK512.2b	512 (aa)	NP_001254981	H2FLF4

Gene Model

Click here to download WBGene00013983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00013983's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00013983	ZK512.2	76	31.293	WBGene00021277	Y23H5B.6	59	31.306
WBGene00013983	ZK512.2	62	31.367	WBGene00019245	sacy-1	57	31.367
WBGene00013983	ZK512.2	57	30.484	WBGene00002244	laf-1	53	30.056
WBGene00013983	ZK512.2	74	30.787	WBGene00015232	B0511.6	78	30.787
WBGene00013983	ZK512.2	65	30.263	WBGene00019219	H20J04.4	77	30.263
WBGene00013983	ZK512.2	62	30.919	WBGene00012059	T26G10.1	71	30.919
WBGene00013983	ZK512.2	61	31.016	WBGene00006888	vbh-1	56	31.016

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00013983	ZK512.2	84	39.041	ENSG00000111364	DDX55	94	36.661	Homo_sapiens
WBGene00013983	ZK512.2	98	37.016	ENSAPOG00000013126	ddx55	95	37.329	Acanthochromis_polyacanthus
WBGene00013983	ZK512.2	98	37.209	ENSAMEG00000015274	DDX55	94	37.138	Ailuropoda_melanoleuca
WBGene00013983	ZK512.2	98	36.873	ENSACIG00000007580	ddx55	95	36.552	Amphilophus_citrinellus
WBGene00013983	ZK512.2	98	37.016	ENSAOCG00000012037	ddx55	89	37.182	Amphiprion_ocellaris
WBGene00013983	ZK512.2	98	36.893	ENSAPEG00000011003	ddx55	89	37.349	Amphiprion_percula
WBGene00013983	ZK512.2	98	38.004	ENSATEG00000004029	ddx55	94	37.586	Anabas_testudineus
WBGene00013983	ZK512.2	98	35.783	ENSAPLG00000015032	DDX55	94	36.447	Anas_platyrhynchos
WBGene00013983	ZK512.2	83	37.931	ENSACAG00000015296	DDX55	92	36.458	Anolis_carolinensis
WBGene00013983	ZK512.2	84	32.317	ENSANAG00000034064	DDX55	90	36.129	Aotus_nancymaae
WBGene00013983	ZK512.2	98	37.066	ENSACLG00000024691	ddx55	95	36.724	Astatotilapia_calliptera
WBGene00013983	ZK512.2	86	34.521	ENSAMXG00000019947	ddx55	90	33.097	Astyanax_mexicanus
WBGene00013983	ZK512.2	100	35.701	ENSBTAG00000007266	DDX55	94	34.812	Bos_taurus
WBGene00013983	ZK512.2	86	38.839	ENSCJAG00000020471	-	92	37.173	Callithrix_jacchus
WBGene00013983	ZK512.2	98	37.622	ENSCAFG00000007452	DDX55	94	37.138	Canis_familiaris
WBGene00013983	ZK512.2	87	38.901	ENSCAFG00020015254	DDX55	92	37.692	Canis_lupus_dingo
WBGene00013983	ZK512.2	84	38.532	ENSCHIG00000020402	DDX55	94	37.201	Capra_hircus
WBGene00013983	ZK512.2	98	36.914	ENSTSYG00000007427	DDX55	92	36.555	Carlito_syrichta
WBGene00013983	ZK512.2	87	38.085	ENSCAPG00000005124	DDX55	91	37.818	Cavia_aperea
WBGene00013983	ZK512.2	87	38.085	ENSCPOG00000010015	DDX55	94	36.770	Cavia_porcellus
WBGene00013983	ZK512.2	80	39.474	ENSCCAG00000021652	DDX55	92	36.364	Cebus_capucinus
WBGene00013983	ZK512.2	83	37.097	ENSCATG00000034315	DDX55	92	35.640	Cercocebus_atys
WBGene00013983	ZK512.2	86	38.900	ENSCLAG00000011203	DDX55	94	37.056	Chinchilla_lanigera
WBGene00013983	ZK512.2	84	39.041	ENSCSAG00000002057	DDX55	92	36.907	Chlorocebus_sabaeus
WBGene00013983	ZK512.2	87	36.986	ENSCPBG00000025960	DDX55	95	36.059	Chrysemys_picta_bellii
WBGene00013983	ZK512.2	99	35.094	ENSCING00000009622	-	93	36.538	Ciona_intestinalis
WBGene00013983	ZK512.2	99	36.364	ENSCSAVG00000003375	-	95	37.736	Ciona_savignyi
WBGene00013983	ZK512.2	84	39.041	ENSCANG00000000156	DDX55	92	36.907	Colobus_angolensis_palliatus
WBGene00013983	ZK512.2	98	36.078	ENSCGRG00001001652	Ddx55	95	36.210	Cricetulus_griseus_chok1gshd
WBGene00013983	ZK512.2	98	36.078	ENSCGRG00000014742	Ddx55	95	36.210	Cricetulus_griseus_crigri
WBGene00013983	ZK512.2	84	39.773	ENSCSEG00000012161	ddx55	92	37.390	Cynoglossus_semilaevis
WBGene00013983	ZK512.2	96	37.573	ENSCVAG00000006635	ddx55	92	37.699	Cyprinodon_variegatus
WBGene00013983	ZK512.2	84	39.498	ENSDARG00000009864	ddx55	92	37.633	Danio_rerio
WBGene00013983	ZK512.2	99	35.945	ENSDNOG00000005167	DDX55	93	36.041	Dasypus_novemcinctus
WBGene00013983	ZK512.2	97	34.160	FBgn0037561	CG9630	94	35.406	Drosophila_melanogaster
WBGene00013983	ZK512.2	73	34.828	ENSETEG00000001826	DDX55	79	33.406	Echinops_telfairi
WBGene00013983	ZK512.2	98	37.121	ENSEBUG00000007071	ddx55	97	38.129	Eptatretus_burgeri
WBGene00013983	ZK512.2	98	36.133	ENSEASG00005012650	DDX55	93	39.485	Equus_asinus_asinus
WBGene00013983	ZK512.2	84	38.761	ENSECAG00000011237	DDX55	83	37.739	Equus_caballus
WBGene00013983	ZK512.2	87	35.411	ENSEEUG00000006313	DDX55	83	36.186	Erinaceus_europaeus
WBGene00013983	ZK512.2	98	36.590	ENSELUG00000002616	ddx55	94	36.130	Esox_lucius
WBGene00013983	ZK512.2	98	37.428	ENSFCAG00000003770	DDX55	94	37.415	Felis_catus
WBGene00013983	ZK512.2	98	37.259	ENSFALG00000009300	DDX55	92	37.478	Ficedula_albicollis
WBGene00013983	ZK512.2	84	38.724	ENSFDAG00000004680	DDX55	94	37.308	Fukomys_damarensis
WBGene00013983	ZK512.2	84	38.833	ENSFHEG00000007912	ddx55	95	36.960	Fundulus_heteroclitus
WBGene00013983	ZK512.2	98	34.884	ENSGMOG00000017762	ddx55	94	36.068	Gadus_morhua
WBGene00013983	ZK512.2	98	37.236	ENSGALG00000003298	DDX55	94	36.960	Gallus_gallus
WBGene00013983	ZK512.2	97	36.914	ENSGAFG00000004388	ddx55	97	36.860	Gambusia_affinis
WBGene00013983	ZK512.2	98	37.282	ENSGACG00000015591	ddx55	89	37.743	Gasterosteus_aculeatus
WBGene00013983	ZK512.2	87	37.182	ENSGAGG00000014403	DDX55	97	36.121	Gopherus_agassizii
WBGene00013983	ZK512.2	84	39.041	ENSGGOG00000026102	DDX55	94	36.661	Gorilla_gorilla
WBGene00013983	ZK512.2	98	37.066	ENSHBUG00000011523	ddx55	95	36.724	Haplochromis_burtoni
WBGene00013983	ZK512.2	84	39.498	ENSHGLG00000019202	DDX55	94	36.833	Heterocephalus_glaber_female
WBGene00013983	ZK512.2	84	39.498	ENSHGLG00100019440	DDX55	94	36.833	Heterocephalus_glaber_male
WBGene00013983	ZK512.2	95	33.512	ENSHCOG00000004710	ddx55	93	33.922	Hippocampus_comes
WBGene00013983	ZK512.2	85	39.189	ENSIPUG00000014551	ddx55	89	37.611	Ictalurus_punctatus
WBGene00013983	ZK512.2	98	36.852	ENSSTOG00000006121	DDX55	92	36.491	Ictidomys_tridecemlineatus
WBGene00013983	ZK512.2	85	37.525	ENSJJAG00000013401	Ddx55	94	36.082	Jaculus_jaculus
WBGene00013983	ZK512.2	98	37.524	ENSKMAG00000022006	ddx55	92	37.786	Kryptolebias_marmoratus
WBGene00013983	ZK512.2	84	37.827	ENSLBEG00000021815	ddx55	93	35.911	Labrus_bergylta
WBGene00013983	ZK512.2	83	40.046	ENSLACG00000017050	DDX55	94	38.889	Latimeria_chalumnae
WBGene00013983	ZK512.2	89	37.764	ENSLOCG00000005828	ddx55	91	37.168	Lepisosteus_oculatus
WBGene00013983	ZK512.2	98	36.739	ENSLAFG00000007293	DDX55	92	36.796	Loxodonta_africana
WBGene00013983	ZK512.2	84	39.041	ENSMFAG00000038165	DDX55	92	36.907	Macaca_fascicularis
WBGene00013983	ZK512.2	84	39.269	ENSMMUG00000013178	DDX55	92	37.083	Macaca_mulatta
WBGene00013983	ZK512.2	84	39.041	ENSMNEG00000028630	DDX55	92	36.861	Macaca_nemestrina
WBGene00013983	ZK512.2	84	39.041	ENSMLEG00000039187	DDX55	92	36.907	Mandrillus_leucophaeus
WBGene00013983	ZK512.2	97	37.695	ENSMAMG00000011297	ddx55	91	37.633	Mastacembelus_armatus
WBGene00013983	ZK512.2	98	37.066	ENSMZEG00005008047	ddx55	95	36.724	Maylandia_zebra
WBGene00013983	ZK512.2	98	37.187	ENSMGAG00000003185	DDX55	90	37.276	Meleagris_gallopavo
WBGene00013983	ZK512.2	98	36.240	ENSMAUG00000020054	Ddx55	95	36.379	Mesocricetus_auratus
WBGene00013983	ZK512.2	98	32.877	ENSMICG00000006477	DDX55	92	33.803	Microcebus_murinus
WBGene00013983	ZK512.2	98	36.609	ENSMOCG00000021289	Ddx55	95	36.027	Microtus_ochrogaster
WBGene00013983	ZK512.2	98	36.275	ENSMMOG00000009411	ddx55	94	36.644	Mola_mola
WBGene00013983	ZK512.2	84	38.952	ENSMODG00000012519	DDX55	92	38.378	Monodelphis_domestica
WBGene00013983	ZK512.2	83	36.239	ENSMALG00000018543	ddx55	90	34.806	Monopterus_albus
WBGene00013983	ZK512.2	75	38.375	MGP_CAROLIEiJ_G0027755	-	98	38.375	Mus_caroli
WBGene00013983	ZK512.2	98	37.187	ENSMUSG00000029389	Ddx55	95	37.037	Mus_musculus
WBGene00013983	ZK512.2	99	36.224	MGP_PahariEiJ_G0024335	Ddx55	95	36.869	Mus_pahari
WBGene00013983	ZK512.2	99	36.395	MGP_SPRETEiJ_G0028753	Ddx55	95	37.037	Mus_spretus
WBGene00013983	ZK512.2	98	35.385	ENSMPUG00000001505	DDX55	94	35.775	Mustela_putorius_furo
WBGene00013983	ZK512.2	73	40.526	ENSMLUG00000025148	-	76	39.066	Myotis_lucifugus
WBGene00013983	ZK512.2	98	35.421	ENSMLUG00000001265	-	89	35.327	Myotis_lucifugus
WBGene00013983	ZK512.2	99	36.163	ENSNGAG00000020564	Ddx55	95	36.163	Nannospalax_galili
WBGene00013983	ZK512.2	98	37.066	ENSNBRG00000018748	ddx55	95	36.724	Neolamprologus_brichardi
WBGene00013983	ZK512.2	84	39.041	ENSNLEG00000001658	DDX55	94	36.661	Nomascus_leucogenys
WBGene00013983	ZK512.2	86	37.154	ENSMEUG00000013689	DDX55	94	36.672	Notamacropus_eugenii
WBGene00013983	ZK512.2	83	38.991	ENSOPRG00000000850	DDX55	91	37.102	Ochotona_princeps
WBGene00013983	ZK512.2	98	38.327	ENSODEG00000009632	-	95	37.819	Octodon_degus
WBGene00013983	ZK512.2	80	35.280	ENSODEG00000016592	-	87	35.332	Octodon_degus
WBGene00013983	ZK512.2	98	36.873	ENSONIG00000015311	ddx55	93	36.552	Oreochromis_niloticus
WBGene00013983	ZK512.2	84	38.952	ENSOANG00000015332	DDX55	95	38.214	Ornithorhynchus_anatinus
WBGene00013983	ZK512.2	84	38.902	ENSOCUG00000003456	DDX55	94	36.815	Oryctolagus_cuniculus
WBGene00013983	ZK512.2	98	38.207	ENSORLG00000029482	ddx55	93	37.148	Oryzias_latipes
WBGene00013983	ZK512.2	98	38.207	ENSORLG00015004885	ddx55	93	37.390	Oryzias_latipes_hsok
WBGene00013983	ZK512.2	98	38.953	ENSOMEG00000023619	ddx55	95	38.185	Oryzias_melastigma
WBGene00013983	ZK512.2	98	37.452	ENSOGAG00000009195	DDX55	93	37.138	Otolemur_garnettii
WBGene00013983	ZK512.2	84	38.761	ENSOARG00000003364	DDX55	94	37.201	Ovis_aries
WBGene00013983	ZK512.2	84	39.041	ENSPPAG00000005988	DDX55	94	36.661	Pan_paniscus
WBGene00013983	ZK512.2	98	37.428	ENSPPRG00000012157	DDX55	94	37.415	Panthera_pardus
WBGene00013983	ZK512.2	98	37.428	ENSPTIG00000011490	DDX55	89	38.559	Panthera_tigris_altaica
WBGene00013983	ZK512.2	84	39.041	ENSPTRG00000005601	DDX55	94	36.661	Pan_troglodytes
WBGene00013983	ZK512.2	84	39.041	ENSPANG00000007905	DDX55	92	36.907	Papio_anubis
WBGene00013983	ZK512.2	98	36.609	ENSPKIG00000023661	ddx55	94	36.620	Paramormyrops_kingsleyae
WBGene00013983	ZK512.2	98	37.864	ENSPSIG00000012901	DDX55	96	37.455	Pelodiscus_sinensis
WBGene00013983	ZK512.2	83	39.907	ENSPMGG00000017224	ddx55	87	39.583	Periophthalmus_magnuspinnatus
WBGene00013983	ZK512.2	99	36.224	ENSPEMG00000018052	Ddx55	95	36.869	Peromyscus_maniculatus_bairdii
WBGene00013983	ZK512.2	79	39.614	ENSPMAG00000007486	ddx55	95	36.187	Petromyzon_marinus
WBGene00013983	ZK512.2	85	38.845	ENSPCIG00000010973	DDX55	95	38.230	Phascolarctos_cinereus
WBGene00013983	ZK512.2	97	36.381	ENSPFOG00000006970	ddx55	86	36.842	Poecilia_formosa
WBGene00013983	ZK512.2	95	36.607	ENSPLAG00000014735	ddx55	94	36.620	Poecilia_latipinna
WBGene00013983	ZK512.2	97	36.719	ENSPMEG00000020635	ddx55	94	37.148	Poecilia_mexicana
WBGene00013983	ZK512.2	84	40.411	ENSPREG00000016644	ddx55	93	37.943	Poecilia_reticulata
WBGene00013983	ZK512.2	84	38.813	ENSPPYG00000005091	DDX55	94	37.088	Pongo_abelii
WBGene00013983	ZK512.2	84	38.636	ENSPCAG00000014127	DDX55	94	36.815	Procavia_capensis
WBGene00013983	ZK512.2	98	36.328	ENSPCOG00000011189	DDX55	92	36.907	Propithecus_coquereli
WBGene00013983	ZK512.2	98	36.399	ENSPVAG00000015321	DDX55	95	36.627	Pteropus_vampyrus
WBGene00013983	ZK512.2	98	36.873	ENSPNYG00000003669	ddx55	95	36.552	Pundamilia_nyererei
WBGene00013983	ZK512.2	95	35.772	ENSPNAG00000012855	ddx55	91	36.007	Pygocentrus_nattereri
WBGene00013983	ZK512.2	99	36.163	ENSRNOG00000001043	Ddx55	94	36.807	Rattus_norvegicus
WBGene00013983	ZK512.2	84	39.041	ENSRBIG00000044699	DDX55	92	36.861	Rhinopithecus_bieti
WBGene00013983	ZK512.2	84	39.041	ENSRROG00000024824	DDX55	92	36.907	Rhinopithecus_roxellana
WBGene00013983	ZK512.2	83	34.292	YFL002C	-	95	33.841	Saccharomyces_cerevisiae
WBGene00013983	ZK512.2	81	39.248	ENSSBOG00000024833	DDX55	94	37.436	Saimiri_boliviensis_boliviensis
WBGene00013983	ZK512.2	84	39.180	ENSSHAG00000015820	DDX55	94	38.559	Sarcophilus_harrisii
WBGene00013983	ZK512.2	98	37.356	ENSSFOG00015017496	ddx55	91	37.193	Scleropages_formosus
WBGene00013983	ZK512.2	98	37.037	ENSSMAG00000010441	ddx55	94	36.968	Scophthalmus_maximus
WBGene00013983	ZK512.2	97	36.557	ENSSDUG00000023568	ddx55	90	36.460	Seriola_dumerili
WBGene00013983	ZK512.2	98	33.270	ENSSLDG00000011299	ddx55	91	33.450	Seriola_lalandi_dorsalis
WBGene00013983	ZK512.2	98	35.882	ENSSARG00000003842	DDX55	95	36.531	Sorex_araneus
WBGene00013983	ZK512.2	98	36.609	ENSSPUG00000012798	DDX55	94	37.265	Sphenodon_punctatus
WBGene00013983	ZK512.2	98	37.037	ENSSPAG00000011806	ddx55	93	37.824	Stegastes_partitus
WBGene00013983	ZK512.2	84	38.724	ENSSSCG00000009771	DDX55	93	37.667	Sus_scrofa
WBGene00013983	ZK512.2	98	36.471	ENSTGUG00000005302	-	95	37.842	Taeniopygia_guttata
WBGene00013983	ZK512.2	98	36.770	ENSTRUG00000018525	ddx55	94	36.851	Takifugu_rubripes
WBGene00013983	ZK512.2	89	37.630	ENSTNIG00000013515	DDX55	93	36.348	Tetraodon_nigroviridis
WBGene00013983	ZK512.2	71	36.828	ENSTBEG00000010822	DDX55	94	36.580	Tupaia_belangeri
WBGene00013983	ZK512.2	98	37.137	ENSTTRG00000007251	DDX55	94	36.860	Tursiops_truncatus
WBGene00013983	ZK512.2	98	36.609	ENSUAMG00000012589	DDX55	94	36.942	Ursus_americanus
WBGene00013983	ZK512.2	98	36.609	ENSUMAG00000003869	DDX55	95	38.069	Ursus_maritimus
WBGene00013983	ZK512.2	98	32.882	ENSVPAG00000007028	DDX55	95	34.414	Vicugna_pacos
WBGene00013983	ZK512.2	98	37.236	ENSVVUG00000027506	DDX55	96	37.773	Vulpes_vulpes
WBGene00013983	ZK512.2	98	37.645	ENSXETG00000005825	ddx55	92	38.153	Xenopus_tropicalis
WBGene00013983	ZK512.2	97	36.914	ENSXCOG00000010120	ddx55	97	36.968	Xiphophorus_couchianus
WBGene00013983	ZK512.2	98	35.959	ENSXMAG00000011731	ddx55	97	37.138	Xiphophorus_maculatus