EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00014111 (Gene tree)
Gene ID: -
Gene Symbol: rpc-25
Alias: -
Full Name: RNA Polymerase%2C Class III (C)
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 920 bases
Position: chrV:10205683-10206602
Accession: Q23645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ZK856	RNA_pol_Rbc25	PF08292.12	1.6e-29	1	1
ZK856	SHS2_Rpb7-N	PF03876.17	9.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ZK856.10	-	822	NM_073224	ZK856.10	239 (aa)	NP_505625	Q23645

Gene Model

Click here to download WBGene00014111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00014111's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00014111	rpc-25	82	38.835	ENSG00000100413	POLR3H	99	39.409	Homo_sapiens
WBGene00014111	rpc-25	81	37.788	ENSAPOG00000011407	polr3h	99	37.788	Acanthochromis_polyacanthus
WBGene00014111	rpc-25	82	38.350	ENSAMEG00000015630	POLR3H	99	39.409	Ailuropoda_melanoleuca
WBGene00014111	rpc-25	82	39.899	ENSACIG00000010128	polr3h	99	40.306	Amphilophus_citrinellus
WBGene00014111	rpc-25	82	37.963	ENSAOCG00000019002	polr3h	99	38.318	Amphiprion_ocellaris
WBGene00014111	rpc-25	82	37.500	ENSAPEG00000012507	polr3h	99	37.850	Amphiprion_percula
WBGene00014111	rpc-25	82	37.037	ENSATEG00000008085	polr3h	99	37.383	Anabas_testudineus
WBGene00014111	rpc-25	82	39.234	ENSAPLG00000005063	POLR3H	99	39.423	Anas_platyrhynchos
WBGene00014111	rpc-25	82	40.291	ENSACAG00000011213	POLR3H	99	40.488	Anolis_carolinensis
WBGene00014111	rpc-25	82	38.835	ENSANAG00000025122	POLR3H	99	39.409	Aotus_nancymaae
WBGene00014111	rpc-25	82	37.500	ENSACLG00000014650	polr3h	99	37.850	Astatotilapia_calliptera
WBGene00014111	rpc-25	82	38.974	ENSAMXG00000015544	polr3h	99	39.175	Astyanax_mexicanus
WBGene00014111	rpc-25	82	38.835	ENSBTAG00000005311	POLR3H	99	39.901	Bos_taurus
WBGene00014111	rpc-25	82	39.024	ENSCJAG00000005072	POLR3H	99	39.409	Callithrix_jacchus
WBGene00014111	rpc-25	82	37.864	ENSCAFG00000001053	POLR3H	99	38.916	Canis_familiaris
WBGene00014111	rpc-25	82	37.864	ENSCAFG00020001964	POLR3H	99	38.916	Canis_lupus_dingo
WBGene00014111	rpc-25	82	38.835	ENSCHIG00000013984	POLR3H	99	39.901	Capra_hircus
WBGene00014111	rpc-25	82	38.835	ENSTSYG00000003484	POLR3H	99	39.409	Carlito_syrichta
WBGene00014111	rpc-25	53	44.094	ENSCAPG00000003786	POLR3H	83	44.094	Cavia_aperea
WBGene00014111	rpc-25	82	39.216	ENSCPOG00000012650	POLR3H	99	39.409	Cavia_porcellus
WBGene00014111	rpc-25	82	38.835	ENSCCAG00000025802	POLR3H	99	39.409	Cebus_capucinus
WBGene00014111	rpc-25	82	38.835	ENSCATG00000018316	POLR3H	99	39.409	Cercocebus_atys
WBGene00014111	rpc-25	82	39.409	ENSCLAG00000016948	POLR3H	99	39.604	Chinchilla_lanigera
WBGene00014111	rpc-25	82	38.835	ENSCSAG00000005798	POLR3H	85	39.409	Chlorocebus_sabaeus
WBGene00014111	rpc-25	82	39.806	ENSCPBG00000020544	POLR3H	99	40.000	Chrysemys_picta_bellii
WBGene00014111	rpc-25	82	38.537	ENSCING00000012767	-	99	39.706	Ciona_intestinalis
WBGene00014111	rpc-25	82	37.255	ENSCSAVG00000010448	-	99	37.931	Ciona_savignyi
WBGene00014111	rpc-25	82	38.835	ENSCANG00000035073	POLR3H	99	39.409	Colobus_angolensis_palliatus
WBGene00014111	rpc-25	69	36.782	ENSCGRG00001023556	Polr3h	98	38.012	Cricetulus_griseus_chok1gshd
WBGene00014111	rpc-25	82	32.524	ENSCGRG00000017869	Polr3h	98	33.498	Cricetulus_griseus_crigri
WBGene00014111	rpc-25	69	44.512	ENSCSEG00000006721	polr3h	79	44.512	Cynoglossus_semilaevis
WBGene00014111	rpc-25	82	36.574	ENSCVAG00000010996	polr3h	99	36.916	Cyprinodon_variegatus
WBGene00014111	rpc-25	81	36.916	ENSDARG00000102590	polr3h	99	36.916	Danio_rerio
WBGene00014111	rpc-25	82	38.835	ENSDNOG00000025527	POLR3H	99	39.409	Dasypus_novemcinctus
WBGene00014111	rpc-25	82	38.350	ENSDORG00000002215	Polr3h	99	38.916	Dipodomys_ordii
WBGene00014111	rpc-25	81	35.211	FBgn0036188	CG7339	88	36.620	Drosophila_melanogaster
WBGene00014111	rpc-25	82	36.893	ENSETEG00000010746	POLR3H	99	37.438	Echinops_telfairi
WBGene00014111	rpc-25	82	33.484	ENSEBUG00000005511	polr3h	99	33.790	Eptatretus_burgeri
WBGene00014111	rpc-25	82	37.864	ENSEASG00005001539	POLR3H	99	38.916	Equus_asinus_asinus
WBGene00014111	rpc-25	82	34.951	ENSECAG00000019715	POLR3H	98	35.961	Equus_caballus
WBGene00014111	rpc-25	82	36.715	ENSEEUG00000010464	POLR3H	99	37.255	Erinaceus_europaeus
WBGene00014111	rpc-25	82	38.095	ENSELUG00000007834	polr3h	99	38.462	Esox_lucius
WBGene00014111	rpc-25	82	39.024	ENSFCAG00000006684	POLR3H	99	39.409	Felis_catus
WBGene00014111	rpc-25	82	40.291	ENSFALG00000011952	POLR3H	99	40.488	Ficedula_albicollis
WBGene00014111	rpc-25	82	39.706	ENSFDAG00000008844	POLR3H	99	39.901	Fukomys_damarensis
WBGene00014111	rpc-25	82	37.500	ENSFHEG00000020517	polr3h	99	37.850	Fundulus_heteroclitus
WBGene00014111	rpc-25	81	39.252	ENSGMOG00000001934	polr3h	99	39.252	Gadus_morhua
WBGene00014111	rpc-25	82	40.291	ENSGALG00000011947	POLR3H	99	40.488	Gallus_gallus
WBGene00014111	rpc-25	82	37.963	ENSGAFG00000010908	polr3h	99	38.318	Gambusia_affinis
WBGene00014111	rpc-25	82	37.037	ENSGACG00000007549	polr3h	99	37.383	Gasterosteus_aculeatus
WBGene00014111	rpc-25	82	39.806	ENSGAGG00000017507	POLR3H	99	40.000	Gopherus_agassizii
WBGene00014111	rpc-25	82	38.835	ENSGGOG00000038191	POLR3H	98	33.498	Gorilla_gorilla
WBGene00014111	rpc-25	82	37.500	ENSHBUG00000017295	polr3h	99	37.850	Haplochromis_burtoni
WBGene00014111	rpc-25	82	39.706	ENSHGLG00000014795	POLR3H	99	39.901	Heterocephalus_glaber_female
WBGene00014111	rpc-25	82	39.706	ENSHGLG00100014750	POLR3H	99	39.901	Heterocephalus_glaber_male
WBGene00014111	rpc-25	81	37.559	ENSHCOG00000006814	polr3h	99	37.559	Hippocampus_comes
WBGene00014111	rpc-25	82	36.574	ENSIPUG00000019750	polr3h	99	36.916	Ictalurus_punctatus
WBGene00014111	rpc-25	82	38.350	ENSSTOG00000016215	POLR3H	99	39.409	Ictidomys_tridecemlineatus
WBGene00014111	rpc-25	82	38.835	ENSJJAG00000017986	Polr3h	99	39.901	Jaculus_jaculus
WBGene00014111	rpc-25	82	37.500	ENSKMAG00000014797	polr3h	99	37.850	Kryptolebias_marmoratus
WBGene00014111	rpc-25	81	37.129	ENSLBEG00000010889	polr3h	99	37.129	Labrus_bergylta
WBGene00014111	rpc-25	82	40.097	ENSLACG00000011734	POLR3H	99	40.291	Latimeria_chalumnae
WBGene00014111	rpc-25	69	43.636	ENSLOCG00000011621	polr3h	69	43.636	Lepisosteus_oculatus
WBGene00014111	rpc-25	82	39.320	ENSLAFG00000006033	POLR3H	99	40.394	Loxodonta_africana
WBGene00014111	rpc-25	82	38.835	ENSMFAG00000001153	POLR3H	99	39.409	Macaca_fascicularis
WBGene00014111	rpc-25	82	38.835	ENSMMUG00000001459	POLR3H	99	39.409	Macaca_mulatta
WBGene00014111	rpc-25	82	38.835	ENSMNEG00000022264	POLR3H	99	39.409	Macaca_nemestrina
WBGene00014111	rpc-25	67	37.647	ENSMLEG00000024568	POLR3H	98	38.323	Mandrillus_leucophaeus
WBGene00014111	rpc-25	82	37.500	ENSMAMG00000007445	polr3h	99	39.252	Mastacembelus_armatus
WBGene00014111	rpc-25	82	37.500	ENSMZEG00005003756	polr3h	99	37.850	Maylandia_zebra
WBGene00014111	rpc-25	82	39.234	ENSMGAG00000012126	POLR3H	99	39.423	Meleagris_gallopavo
WBGene00014111	rpc-25	82	38.350	ENSMAUG00000022215	Polr3h	99	39.409	Mesocricetus_auratus
WBGene00014111	rpc-25	82	38.835	ENSMICG00000013546	POLR3H	99	39.409	Microcebus_murinus
WBGene00014111	rpc-25	82	37.864	ENSMOCG00000018747	Polr3h	99	38.916	Microtus_ochrogaster
WBGene00014111	rpc-25	81	41.237	ENSMMOG00000002705	polr3h	99	41.237	Mola_mola
WBGene00014111	rpc-25	82	38.835	ENSMODG00000016563	POLR3H	99	39.409	Monodelphis_domestica
WBGene00014111	rpc-25	82	40.404	ENSMALG00000013403	polr3h	99	40.816	Monopterus_albus
WBGene00014111	rpc-25	82	38.350	MGP_CAROLIEiJ_G0020063	Polr3h	99	39.409	Mus_caroli
WBGene00014111	rpc-25	82	38.350	ENSMUSG00000022476	Polr3h	99	39.409	Mus_musculus
WBGene00014111	rpc-25	82	38.350	MGP_PahariEiJ_G0020065	Polr3h	99	39.409	Mus_pahari
WBGene00014111	rpc-25	82	38.350	MGP_SPRETEiJ_G0020964	Polr3h	99	39.409	Mus_spretus
WBGene00014111	rpc-25	82	38.350	ENSMPUG00000016395	POLR3H	99	39.409	Mustela_putorius_furo
WBGene00014111	rpc-25	82	39.024	ENSMLUG00000002487	POLR3H	99	39.409	Myotis_lucifugus
WBGene00014111	rpc-25	82	38.350	ENSNGAG00000015009	Polr3h	99	39.409	Nannospalax_galili
WBGene00014111	rpc-25	69	43.902	ENSNBRG00000003286	polr3h	71	43.902	Neolamprologus_brichardi
WBGene00014111	rpc-25	82	38.835	ENSNLEG00000015536	POLR3H	99	39.409	Nomascus_leucogenys
WBGene00014111	rpc-25	82	37.073	ENSMEUG00000002041	POLR3H	98	37.438	Notamacropus_eugenii
WBGene00014111	rpc-25	82	37.500	ENSONIG00000008444	polr3h	99	37.850	Oreochromis_niloticus
WBGene00014111	rpc-25	82	37.561	ENSOANG00000004374	-	99	38.119	Ornithorhynchus_anatinus
WBGene00014111	rpc-25	82	37.864	ENSOCUG00000007275	POLR3H	99	38.424	Oryctolagus_cuniculus
WBGene00014111	rpc-25	81	38.318	ENSORLG00000014160	polr3h	99	38.318	Oryzias_latipes
WBGene00014111	rpc-25	81	38.318	ENSORLG00020007765	polr3h	99	38.318	Oryzias_latipes_hni
WBGene00014111	rpc-25	81	38.318	ENSORLG00015019039	polr3h	99	38.318	Oryzias_latipes_hsok
WBGene00014111	rpc-25	81	37.850	ENSOMEG00000005764	polr3h	99	37.850	Oryzias_melastigma
WBGene00014111	rpc-25	82	38.537	ENSOGAG00000002850	-	99	38.916	Otolemur_garnettii
WBGene00014111	rpc-25	82	35.922	ENSOGAG00000030416	-	99	36.946	Otolemur_garnettii
WBGene00014111	rpc-25	82	38.835	ENSOARG00000018319	POLR3H	99	39.901	Ovis_aries
WBGene00014111	rpc-25	82	38.835	ENSPPAG00000031000	POLR3H	99	39.409	Pan_paniscus
WBGene00014111	rpc-25	82	39.024	ENSPPRG00000005361	POLR3H	99	39.409	Panthera_pardus
WBGene00014111	rpc-25	82	39.024	ENSPTIG00000016286	POLR3H	99	39.409	Panthera_tigris_altaica
WBGene00014111	rpc-25	82	38.835	ENSPTRG00000051865	POLR3H	99	39.409	Pan_troglodytes
WBGene00014111	rpc-25	82	38.835	ENSPANG00000015758	POLR3H	99	39.409	Papio_anubis
WBGene00014111	rpc-25	81	37.500	ENSPKIG00000008527	polr3h	99	37.500	Paramormyrops_kingsleyae
WBGene00014111	rpc-25	82	40.291	ENSPSIG00000008284	POLR3H	88	40.488	Pelodiscus_sinensis
WBGene00014111	rpc-25	69	44.512	ENSPMGG00000018036	polr3h	64	44.512	Periophthalmus_magnuspinnatus
WBGene00014111	rpc-25	82	38.835	ENSPEMG00000000726	Polr3h	99	39.409	Peromyscus_maniculatus_bairdii
WBGene00014111	rpc-25	68	32.787	ENSPMAG00000007847	polr3h	96	32.787	Petromyzon_marinus
WBGene00014111	rpc-25	82	30.651	ENSPCIG00000026413	POLR3H	99	31.008	Phascolarctos_cinereus
WBGene00014111	rpc-25	82	36.530	ENSPFOG00000013681	polr3h	99	36.866	Poecilia_formosa
WBGene00014111	rpc-25	82	37.500	ENSPLAG00000017503	polr3h	99	37.850	Poecilia_latipinna
WBGene00014111	rpc-25	82	37.037	ENSPMEG00000018334	polr3h	99	37.383	Poecilia_mexicana
WBGene00014111	rpc-25	82	38.350	ENSPPYG00000010689	-	99	38.916	Pongo_abelii
WBGene00014111	rpc-25	82	38.350	ENSPPYG00000011872	-	99	38.916	Pongo_abelii
WBGene00014111	rpc-25	82	38.835	ENSPCOG00000013751	POLR3H	99	39.409	Propithecus_coquereli
WBGene00014111	rpc-25	82	38.537	ENSPVAG00000001164	POLR3H	99	38.916	Pteropus_vampyrus
WBGene00014111	rpc-25	82	37.500	ENSPNYG00000024040	polr3h	99	37.850	Pundamilia_nyererei
WBGene00014111	rpc-25	82	35.814	ENSPNAG00000004860	polr3h	99	36.150	Pygocentrus_nattereri
WBGene00014111	rpc-25	82	38.350	ENSRNOG00000004471	Polr3h	99	39.409	Rattus_norvegicus
WBGene00014111	rpc-25	82	35.577	ENSRBIG00000040089	POLR3H	98	36.098	Rhinopithecus_bieti
WBGene00014111	rpc-25	82	38.835	ENSRROG00000033728	POLR3H	99	39.409	Rhinopithecus_roxellana
WBGene00014111	rpc-25	81	31.336	YKL144C	RPC25	99	31.336	Saccharomyces_cerevisiae
WBGene00014111	rpc-25	82	38.835	ENSSBOG00000020652	POLR3H	99	39.409	Saimiri_boliviensis_boliviensis
WBGene00014111	rpc-25	82	37.864	ENSSHAG00000010196	POLR3H	99	38.424	Sarcophilus_harrisii
WBGene00014111	rpc-25	82	38.095	ENSSFOG00015011506	polr3h	99	38.462	Scleropages_formosus
WBGene00014111	rpc-25	82	37.500	ENSSMAG00000005784	polr3h	99	37.850	Scophthalmus_maximus
WBGene00014111	rpc-25	82	37.788	ENSSDUG00000014946	polr3h	99	38.140	Seriola_dumerili
WBGene00014111	rpc-25	82	37.788	ENSSLDG00000018207	polr3h	99	38.140	Seriola_lalandi_dorsalis
WBGene00014111	rpc-25	82	40.594	ENSSPUG00000011619	POLR3H	99	40.796	Sphenodon_punctatus
WBGene00014111	rpc-25	82	38.889	ENSSPAG00000017974	polr3h	99	39.252	Stegastes_partitus
WBGene00014111	rpc-25	82	37.864	ENSSSCG00000000063	POLR3H	99	38.916	Sus_scrofa
WBGene00014111	rpc-25	82	38.756	ENSTGUG00000009901	POLR3H	99	38.942	Taeniopygia_guttata
WBGene00014111	rpc-25	81	36.744	ENSTRUG00000004012	polr3h	99	38.140	Takifugu_rubripes
WBGene00014111	rpc-25	81	37.500	ENSTNIG00000004956	polr3h	99	37.963	Tetraodon_nigroviridis
WBGene00014111	rpc-25	82	38.537	ENSTBEG00000011425	POLR3H	99	39.109	Tupaia_belangeri
WBGene00014111	rpc-25	67	37.278	ENSTTRG00000003373	POLR3H	98	37.952	Tursiops_truncatus
WBGene00014111	rpc-25	82	38.350	ENSUAMG00000022585	POLR3H	99	39.409	Ursus_americanus
WBGene00014111	rpc-25	82	35.122	ENSUMAG00000021018	POLR3H	98	35.961	Ursus_maritimus
WBGene00014111	rpc-25	82	37.864	ENSVVUG00000003543	POLR3H	99	38.916	Vulpes_vulpes
WBGene00014111	rpc-25	82	38.647	ENSXETG00000034216	polr3h	99	38.835	Xenopus_tropicalis
WBGene00014111	rpc-25	82	40.306	ENSXCOG00000016022	polr3h	99	40.722	Xiphophorus_couchianus
WBGene00014111	rpc-25	82	37.327	ENSXMAG00000006921	polr3h	99	37.674	Xiphophorus_maculatus