EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00015486 (Gene tree)
Gene ID: -
Gene Symbol: C05D11.9
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3406 bases
Position: chrIII:6427529-6430934
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C05D11	POP1	PF06978.11	1.3e-22	1	2
C05D11	POP1	PF06978.11	1.3e-22	2	2
C05D11	POPLD	PF08170.12	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C05D11.9	-	2406	NM_066007	C05D11.9	752 (aa)	NP_498408	Q11188

Gene Model

Click here to download WBGene00015486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00015486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00015486	C05D11.9	89	32.184	ENSAPOG00000008198	pop1	75	32.184	Acanthochromis_polyacanthus
WBGene00015486	C05D11.9	98	30.028	ENSACIG00000004169	POP1	64	30.028	Amphilophus_citrinellus
WBGene00015486	C05D11.9	89	31.801	ENSAOCG00000010991	pop1	75	31.801	Amphiprion_ocellaris
WBGene00015486	C05D11.9	90	32.932	ENSAPEG00000007607	pop1	78	33.333	Amphiprion_percula
WBGene00015486	C05D11.9	62	32.701	ENSATEG00000024814	POP1	61	30.830	Anabas_testudineus
WBGene00015486	C05D11.9	59	32.197	ENSAPLG00000014418	POP1	52	32.197	Anas_platyrhynchos
WBGene00015486	C05D11.9	89	34.434	ENSACLG00000010951	pop1	75	31.496	Astatotilapia_calliptera
WBGene00015486	C05D11.9	66	31.907	ENSAMXG00000014483	POP1	58	31.907	Astyanax_mexicanus
WBGene00015486	C05D11.9	66	32.941	ENSCSEG00000008737	POP1	60	32.941	Cynoglossus_semilaevis
WBGene00015486	C05D11.9	67	31.939	ENSELUG00000003526	pop1	62	32.319	Esox_lucius
WBGene00015486	C05D11.9	65	31.128	ENSFHEG00000019518	pop1	60	31.128	Fundulus_heteroclitus
WBGene00015486	C05D11.9	59	31.081	ENSGAFG00000019770	POP1	71	30.040	Gambusia_affinis
WBGene00015486	C05D11.9	89	34.434	ENSHBUG00000021583	pop1	75	31.496	Haplochromis_burtoni
WBGene00015486	C05D11.9	97	31.907	ENSIPUG00000018336	pop1	66	31.907	Ictalurus_punctatus
WBGene00015486	C05D11.9	83	33.962	ENSMAMG00000004040	pop1	75	31.890	Mastacembelus_armatus
WBGene00015486	C05D11.9	89	34.434	ENSMZEG00005025448	pop1	75	31.496	Maylandia_zebra
WBGene00015486	C05D11.9	83	33.333	ENSMALG00000012621	POP1	60	31.349	Monopterus_albus
WBGene00015486	C05D11.9	56	33.486	ENSODEG00000003984	POP1	50	31.783	Octodon_degus
WBGene00015486	C05D11.9	89	34.434	ENSONIG00000016445	pop1	75	31.890	Oreochromis_niloticus
WBGene00015486	C05D11.9	67	31.801	ENSORLG00000002839	pop1	63	32.184	Oryzias_latipes
WBGene00015486	C05D11.9	57	33.200	ENSORLG00020022450	POP1	58	33.200	Oryzias_latipes_hni
WBGene00015486	C05D11.9	67	31.801	ENSORLG00015012746	POP1	62	31.801	Oryzias_latipes_hsok
WBGene00015486	C05D11.9	61	33.937	ENSOMEG00000006915	pop1	64	31.801	Oryzias_melastigma
WBGene00015486	C05D11.9	66	30.830	ENSPNAG00000000265	pop1	58	30.830	Pygocentrus_nattereri
WBGene00015486	C05D11.9	64	33.462	ENSSBOG00000020830	POP1	53	33.462	Saimiri_boliviensis_boliviensis
WBGene00015486	C05D11.9	70	33.871	ENSSFOG00015007429	pop1	67	33.463	Scleropages_formosus
WBGene00015486	C05D11.9	74	31.984	ENSSMAG00000010467	POP1	85	31.984	Scophthalmus_maximus
WBGene00015486	C05D11.9	87	31.950	ENSSDUG00000007817	POP1	75	31.765	Seriola_dumerili
WBGene00015486	C05D11.9	83	33.803	ENSSLDG00000012565	POP1	75	31.765	Seriola_lalandi_dorsalis
WBGene00015486	C05D11.9	96	33.333	ENSSPAG00000014955	pop1	85	33.333	Stegastes_partitus
WBGene00015486	C05D11.9	57	32.389	ENSTGUG00000012011	-	50	32.389	Taeniopygia_guttata
WBGene00015486	C05D11.9	89	30.556	ENSTNIG00000013297	pop1	72	30.556	Tetraodon_nigroviridis
WBGene00015486	C05D11.9	57	31.776	ENSXMAG00000002472	POP1	71	30.040	Xiphophorus_maculatus