EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00015583 (Gene tree)
Gene ID: -
Gene Symbol: C08A9.3
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 5418 bases
Position: chrX:17087882-17093299
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C08A9	SID-1_RNA_chan	PF13965.6	2.3e-107	1	2
C08A9	SID-1_RNA_chan	PF13965.6	2.3e-107	2	2
C08A9	SID-1_RNA_chan	PF13965.6	3e-107	1	2
C08A9	SID-1_RNA_chan	PF13965.6	3e-107	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C08A9.3a	-	2155	NM_001270354	C08A9.3a	694 (aa)	NP_001257283	D1MN44
C08A9.3b	-	2220	NM_001270355	C08A9.3b	739 (aa)	NP_001257284	H2KYK1

Gene Model

Click here to download WBGene00015583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00015583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00015583	C08A9.3	99	51.664	WBGene00012573	Y37H2C.1	98	50.689

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00015583	C08A9.3	86	32.323	ENSCAFG00000010667	SIDT1	82	31.092	Canis_familiaris
WBGene00015583	C08A9.3	64	31.667	ENSCAFG00020007153	SIDT1	59	31.667	Canis_lupus_dingo
WBGene00015583	C08A9.3	62	31.818	ENSCHOG00000012517	SIDT1	59	31.818	Choloepus_hoffmanni
WBGene00015583	C08A9.3	64	30.672	ENSCGRG00001020713	Sidt1	79	30.672	Cricetulus_griseus_chok1gshd
WBGene00015583	C08A9.3	64	30.672	ENSCGRG00000012291	Sidt1	79	30.672	Cricetulus_griseus_crigri
WBGene00015583	C08A9.3	88	30.159	ENSDNOG00000019812	SIDT1	86	30.159	Dasypus_novemcinctus
WBGene00015583	C08A9.3	87	31.818	ENSFALG00000005134	SIDT1	82	31.818	Ficedula_albicollis
WBGene00015583	C08A9.3	87	30.303	ENSGAGG00000020438	SIDT1	74	30.303	Gopherus_agassizii
WBGene00015583	C08A9.3	87	30.808	ENSMGAG00000014247	SIDT1	81	30.808	Meleagris_gallopavo
WBGene00015583	C08A9.3	86	31.313	ENSMAUG00000019104	Sidt1	79	30.833	Mesocricetus_auratus
WBGene00015583	C08A9.3	87	31.818	ENSMICG00000049213	SIDT1	80	30.802	Microcebus_murinus
WBGene00015583	C08A9.3	86	31.313	MGP_PahariEiJ_G0016465	Sidt1	79	30.833	Mus_pahari
WBGene00015583	C08A9.3	87	32.828	ENSMPUG00000000291	SIDT1	80	32.083	Mustela_putorius_furo
WBGene00015583	C08A9.3	75	33.077	ENSMLUG00000004255	SIDT1	70	33.077	Myotis_lucifugus
WBGene00015583	C08A9.3	62	32.323	ENSOGAG00000011173	SIDT1	83	32.323	Otolemur_garnettii
WBGene00015583	C08A9.3	84	30.000	ENSPCIG00000019628	SIDT1	87	30.000	Phascolarctos_cinereus
WBGene00015583	C08A9.3	87	32.338	ENSSHAG00000003050	SIDT1	79	31.687	Sarcophilus_harrisii
WBGene00015583	C08A9.3	86	32.323	ENSVVUG00000022076	SIDT1	82	30.233	Vulpes_vulpes