EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00015941 (Gene tree)
Gene ID: -
Gene Symbol: C18A3.3
Alias: -
Full Name: Probable rRNA-processing protein EBP2 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 1732 bases
Position: chrII:5716307-5718038
Accession: Q09958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C18A3	Ebp2	PF05890.12	1.2e-70	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C18A3.3	-	1192	NM_062724	C18A3.3	340 (aa)	NP_495125	Q09958

Gene Model

Click here to download WBGene00015941's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00015941's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00015941	C18A3.3	83	39.597	ENSG00000117395	EBNA1BP2	69	40.284	Homo_sapiens
WBGene00015941	C18A3.3	75	42.593	ENSAPOG00000011943	ebna1bp2	79	41.697	Acanthochromis_polyacanthus
WBGene00015941	C18A3.3	83	39.057	ENSAMEG00000001772	EBNA1BP2	68	41.905	Ailuropoda_melanoleuca
WBGene00015941	C18A3.3	59	44.860	ENSACIG00000011514	ebna1bp2	72	43.231	Amphilophus_citrinellus
WBGene00015941	C18A3.3	75	42.963	ENSAOCG00000005324	ebna1bp2	79	42.066	Amphiprion_ocellaris
WBGene00015941	C18A3.3	75	42.963	ENSAPEG00000011835	ebna1bp2	79	42.066	Amphiprion_percula
WBGene00015941	C18A3.3	54	45.226	ENSATEG00000020458	ebna1bp2	67	44.498	Anabas_testudineus
WBGene00015941	C18A3.3	66	40.426	ENSAPLG00000009109	EBNA1BP2	62	42.038	Anas_platyrhynchos
WBGene00015941	C18A3.3	84	38.312	ENSACAG00000013204	EBNA1BP2	69	40.094	Anolis_carolinensis
WBGene00015941	C18A3.3	83	38.591	ENSANAG00000038474	EBNA1BP2	69	41.232	Aotus_nancymaae
WBGene00015941	C18A3.3	59	43.925	ENSACLG00000000761	ebna1bp2	68	43.925	Astatotilapia_calliptera
WBGene00015941	C18A3.3	52	36.364	ENSAMXG00000042464	EBNA1BP2	74	36.410	Astyanax_mexicanus
WBGene00015941	C18A3.3	75	38.806	ENSAMXG00000018885	ebna1bp2	80	37.687	Astyanax_mexicanus
WBGene00015941	C18A3.3	83	38.721	ENSBTAG00000021544	EBNA1BP2	69	40.000	Bos_taurus
WBGene00015941	C18A3.3	82	37.966	ENSCJAG00000003318	EBNA1BP2	61	41.799	Callithrix_jacchus
WBGene00015941	C18A3.3	83	37.710	ENSCAFG00000005336	EBNA1BP2	69	40.094	Canis_familiaris
WBGene00015941	C18A3.3	83	37.710	ENSCAFG00020017662	EBNA1BP2	69	40.094	Canis_lupus_dingo
WBGene00015941	C18A3.3	83	38.305	ENSCHIG00000022065	EBNA1BP2	69	40.000	Capra_hircus
WBGene00015941	C18A3.3	83	37.919	ENSTSYG00000003666	EBNA1BP2	69	39.336	Carlito_syrichta
WBGene00015941	C18A3.3	83	39.465	ENSCPOG00000005187	EBNA1BP2	69	41.905	Cavia_porcellus
WBGene00015941	C18A3.3	83	37.919	ENSCCAG00000025326	EBNA1BP2	69	40.284	Cebus_capucinus
WBGene00015941	C18A3.3	83	38.462	ENSCATG00000037761	EBNA1BP2	50	40.758	Cercocebus_atys
WBGene00015941	C18A3.3	83	38.721	ENSCLAG00000002547	EBNA1BP2	69	41.429	Chinchilla_lanigera
WBGene00015941	C18A3.3	83	39.130	ENSCSAG00000001177	EBNA1BP2	62	39.462	Chlorocebus_sabaeus
WBGene00015941	C18A3.3	52	39.474	ENSCPBG00000002595	EBNA1BP2	63	39.474	Chrysemys_picta_bellii
WBGene00015941	C18A3.3	57	30.964	ENSCING00000013374	-	84	32.370	Ciona_intestinalis
WBGene00015941	C18A3.3	50	41.243	ENSCSAVG00000004452	-	63	41.489	Ciona_savignyi
WBGene00015941	C18A3.3	83	38.926	ENSCANG00000028459	EBNA1BP2	69	39.810	Colobus_angolensis_palliatus
WBGene00015941	C18A3.3	89	37.188	ENSCGRG00001002074	Ebna1bp2	68	42.105	Cricetulus_griseus_chok1gshd
WBGene00015941	C18A3.3	89	37.188	ENSCGRG00000007272	Ebna1bp2	68	42.105	Cricetulus_griseus_crigri
WBGene00015941	C18A3.3	81	41.237	ENSCSEG00000018795	ebna1bp2	69	42.601	Cynoglossus_semilaevis
WBGene00015941	C18A3.3	75	42.593	ENSCVAG00000004152	ebna1bp2	68	42.791	Cyprinodon_variegatus
WBGene00015941	C18A3.3	80	39.310	ENSDARG00000054980	ebna1bp2	69	42.056	Danio_rerio
WBGene00015941	C18A3.3	83	37.710	ENSDNOG00000024715	EBNA1BP2	68	40.952	Dasypus_novemcinctus
WBGene00015941	C18A3.3	61	35.238	ENSDORG00000007797	Ebna1bp2	52	43.689	Dipodomys_ordii
WBGene00015941	C18A3.3	56	35.160	FBgn0039828	CG1542	71	35.616	Drosophila_melanogaster
WBGene00015941	C18A3.3	77	37.241	ENSEBUG00000011134	ebna1bp2	67	40.359	Eptatretus_burgeri
WBGene00015941	C18A3.3	83	38.384	ENSEASG00005001399	EBNA1BP2	69	40.952	Equus_asinus_asinus
WBGene00015941	C18A3.3	83	38.047	ENSECAG00000024179	EBNA1BP2	69	40.476	Equus_caballus
WBGene00015941	C18A3.3	52	41.885	ENSEEUG00000003662	EBNA1BP2	68	40.865	Erinaceus_europaeus
WBGene00015941	C18A3.3	78	39.146	ENSELUG00000021634	ebna1bp2	64	43.350	Esox_lucius
WBGene00015941	C18A3.3	83	37.710	ENSFCAG00000022345	EBNA1BP2	59	40.476	Felis_catus
WBGene00015941	C18A3.3	74	41.379	ENSFALG00000005658	EBNA1BP2	60	43.784	Ficedula_albicollis
WBGene00015941	C18A3.3	82	37.627	ENSFDAG00000013559	EBNA1BP2	69	39.524	Fukomys_damarensis
WBGene00015941	C18A3.3	90	37.423	ENSFHEG00000001475	ebna1bp2	88	36.913	Fundulus_heteroclitus
WBGene00015941	C18A3.3	74	41.729	ENSGMOG00000004150	ebna1bp2	86	40.226	Gadus_morhua
WBGene00015941	C18A3.3	75	41.111	ENSGAFG00000008885	ebna1bp2	62	42.929	Gambusia_affinis
WBGene00015941	C18A3.3	78	41.281	ENSGACG00000006802	ebna1bp2	70	43.662	Gasterosteus_aculeatus
WBGene00015941	C18A3.3	83	35.690	ENSGAGG00000018237	EBNA1BP2	63	39.474	Gopherus_agassizii
WBGene00015941	C18A3.3	83	38.462	ENSGGOG00000008724	EBNA1BP2	58	40.284	Gorilla_gorilla
WBGene00015941	C18A3.3	59	44.393	ENSHBUG00000023329	ebna1bp2	68	44.393	Haplochromis_burtoni
WBGene00015941	C18A3.3	83	37.710	ENSHGLG00000002849	-	69	40.191	Heterocephalus_glaber_female
WBGene00015941	C18A3.3	52	39.106	ENSHGLG00000010340	-	65	38.384	Heterocephalus_glaber_female
WBGene00015941	C18A3.3	83	37.710	ENSHGLG00100014766	EBNA1BP2	69	40.191	Heterocephalus_glaber_male
WBGene00015941	C18A3.3	59	43.458	ENSHCOG00000004832	ebna1bp2	66	43.662	Hippocampus_comes
WBGene00015941	C18A3.3	75	39.114	ENSIPUG00000013642	ebna1bp2	67	40.777	Ictalurus_punctatus
WBGene00015941	C18A3.3	62	37.736	ENSSTOG00000004747	EBNA1BP2	53	44.340	Ictidomys_tridecemlineatus
WBGene00015941	C18A3.3	83	38.591	ENSJJAG00000012002	Ebna1bp2	69	41.706	Jaculus_jaculus
WBGene00015941	C18A3.3	90	38.941	ENSKMAG00000010961	ebna1bp2	68	42.857	Kryptolebias_marmoratus
WBGene00015941	C18A3.3	75	42.647	ENSLBEG00000014254	ebna1bp2	72	40.693	Labrus_bergylta
WBGene00015941	C18A3.3	79	41.343	ENSLOCG00000006438	ebna1bp2	83	40.909	Lepisosteus_oculatus
WBGene00015941	C18A3.3	83	38.047	ENSLAFG00000018681	EBNA1BP2	69	41.706	Loxodonta_africana
WBGene00015941	C18A3.3	83	39.262	ENSMFAG00000037826	EBNA1BP2	69	40.284	Macaca_fascicularis
WBGene00015941	C18A3.3	83	39.262	ENSMMUG00000002640	EBNA1BP2	69	40.284	Macaca_mulatta
WBGene00015941	C18A3.3	83	39.262	ENSMNEG00000029376	EBNA1BP2	64	40.284	Macaca_nemestrina
WBGene00015941	C18A3.3	83	39.130	ENSMLEG00000028431	EBNA1BP2	62	39.462	Mandrillus_leucophaeus
WBGene00015941	C18A3.3	55	44.608	ENSMAMG00000009561	ebna1bp2	67	43.925	Mastacembelus_armatus
WBGene00015941	C18A3.3	59	43.925	ENSMZEG00005018968	ebna1bp2	68	43.925	Maylandia_zebra
WBGene00015941	C18A3.3	66	38.983	ENSMGAG00000009689	EBNA1BP2	62	39.873	Meleagris_gallopavo
WBGene00015941	C18A3.3	89	36.646	ENSMAUG00000011372	Ebna1bp2	68	41.627	Mesocricetus_auratus
WBGene00015941	C18A3.3	83	38.926	ENSMICG00000007000	EBNA1BP2	69	41.232	Microcebus_murinus
WBGene00015941	C18A3.3	87	36.991	ENSMOCG00000019273	Ebna1bp2	63	42.708	Microtus_ochrogaster
WBGene00015941	C18A3.3	52	45.263	ENSMMOG00000001755	ebna1bp2	69	42.991	Mola_mola
WBGene00015941	C18A3.3	81	36.237	ENSMODG00000011412	EBNA1BP2	85	36.364	Monodelphis_domestica
WBGene00015941	C18A3.3	82	41.497	ENSMALG00000017391	ebna1bp2	68	44.393	Monopterus_albus
WBGene00015941	C18A3.3	87	38.365	MGP_CAROLIEiJ_G0026381	Ebna1bp2	89	42.262	Mus_caroli
WBGene00015941	C18A3.3	87	38.365	ENSMUSG00000028729	Ebna1bp2	89	42.262	Mus_musculus
WBGene00015941	C18A3.3	87	38.050	MGP_PahariEiJ_G0028712	Ebna1bp2	89	42.262	Mus_pahari
WBGene00015941	C18A3.3	87	38.679	MGP_SPRETEiJ_G0027353	Ebna1bp2	89	42.262	Mus_spretus
WBGene00015941	C18A3.3	83	38.384	ENSMPUG00000013779	EBNA1BP2	69	40.952	Mustela_putorius_furo
WBGene00015941	C18A3.3	83	39.394	ENSMLUG00000003809	-	66	42.079	Myotis_lucifugus
WBGene00015941	C18A3.3	80	37.979	ENSMLUG00000011409	-	65	41.436	Myotis_lucifugus
WBGene00015941	C18A3.3	83	37.793	ENSNGAG00000019110	Ebna1bp2	69	40.845	Nannospalax_galili
WBGene00015941	C18A3.3	59	44.393	ENSNBRG00000018937	ebna1bp2	68	44.393	Neolamprologus_brichardi
WBGene00015941	C18A3.3	52	37.696	ENSOPRG00000016032	-	66	38.424	Ochotona_princeps
WBGene00015941	C18A3.3	83	38.127	ENSODEG00000001868	EBNA1BP2	67	41.463	Octodon_degus
WBGene00015941	C18A3.3	59	44.131	ENSONIG00000008855	ebna1bp2	67	44.131	Oreochromis_niloticus
WBGene00015941	C18A3.3	82	36.027	ENSOANG00000001141	EBNA1BP2	61	40.212	Ornithorhynchus_anatinus
WBGene00015941	C18A3.3	83	37.710	ENSOCUG00000005103	EBNA1BP2	69	40.476	Oryctolagus_cuniculus
WBGene00015941	C18A3.3	82	40.550	ENSORLG00000010609	ebna1bp2	86	39.863	Oryzias_latipes
WBGene00015941	C18A3.3	82	40.550	ENSORLG00020009809	ebna1bp2	86	39.863	Oryzias_latipes_hni
WBGene00015941	C18A3.3	82	40.206	ENSORLG00015005799	ebna1bp2	86	39.519	Oryzias_latipes_hsok
WBGene00015941	C18A3.3	75	40.000	ENSOMEG00000008553	ebna1bp2	84	38.246	Oryzias_melastigma
WBGene00015941	C18A3.3	83	39.404	ENSOGAG00000002687	-	64	41.872	Otolemur_garnettii
WBGene00015941	C18A3.3	52	41.361	ENSOARG00000020502	EBNA1BP2	93	39.545	Ovis_aries
WBGene00015941	C18A3.3	83	39.597	ENSPPAG00000038260	EBNA1BP2	58	40.284	Pan_paniscus
WBGene00015941	C18A3.3	83	37.710	ENSPPRG00000005080	EBNA1BP2	69	40.476	Panthera_pardus
WBGene00015941	C18A3.3	98	34.254	ENSPTIG00000006570	EBNA1BP2	69	40.000	Panthera_tigris_altaica
WBGene00015941	C18A3.3	83	39.597	ENSPTRG00000000625	EBNA1BP2	58	40.284	Pan_troglodytes
WBGene00015941	C18A3.3	83	39.130	ENSPANG00000015351	EBNA1BP2	68	40.758	Papio_anubis
WBGene00015941	C18A3.3	75	38.148	ENSPKIG00000011907	ebna1bp2	71	41.304	Paramormyrops_kingsleyae
WBGene00015941	C18A3.3	75	36.940	ENSPSIG00000003073	EBNA1BP2	56	39.474	Pelodiscus_sinensis
WBGene00015941	C18A3.3	75	40.892	ENSPMGG00000010627	ebna1bp2	64	43.564	Periophthalmus_magnuspinnatus
WBGene00015941	C18A3.3	87	37.304	ENSPEMG00000014135	Ebna1bp2	63	42.708	Peromyscus_maniculatus_bairdii
WBGene00015941	C18A3.3	78	37.500	ENSPCIG00000013641	EBNA1BP2	51	40.594	Phascolarctos_cinereus
WBGene00015941	C18A3.3	75	41.111	ENSPFOG00000006385	ebna1bp2	66	39.013	Poecilia_formosa
WBGene00015941	C18A3.3	75	41.111	ENSPLAG00000001407	ebna1bp2	74	39.209	Poecilia_latipinna
WBGene00015941	C18A3.3	75	41.111	ENSPMEG00000000536	ebna1bp2	75	38.494	Poecilia_mexicana
WBGene00015941	C18A3.3	52	43.158	ENSPREG00000021076	ebna1bp2	62	42.929	Poecilia_reticulata
WBGene00015941	C18A3.3	52	41.146	ENSPPYG00000001456	-	89	39.336	Pongo_abelii
WBGene00015941	C18A3.3	83	38.591	ENSPCOG00000023100	EBNA1BP2	69	40.758	Propithecus_coquereli
WBGene00015941	C18A3.3	83	39.057	ENSPVAG00000011448	EBNA1BP2	69	40.476	Pteropus_vampyrus
WBGene00015941	C18A3.3	59	42.991	ENSPNYG00000017056	ebna1bp2	68	42.991	Pundamilia_nyererei
WBGene00015941	C18A3.3	80	40.559	ENSPNAG00000017674	ebna1bp2	85	40.278	Pygocentrus_nattereri
WBGene00015941	C18A3.3	87	38.679	ENSRNOG00000050287	Ebna1bp2	66	42.157	Rattus_norvegicus
WBGene00015941	C18A3.3	87	38.679	ENSRNOG00000045760	LOC108348080	66	42.157	Rattus_norvegicus
WBGene00015941	C18A3.3	83	38.796	ENSRBIG00000034587	EBNA1BP2	58	40.284	Rhinopithecus_bieti
WBGene00015941	C18A3.3	83	38.796	ENSRROG00000012178	EBNA1BP2	58	40.284	Rhinopithecus_roxellana
WBGene00015941	C18A3.3	83	38.255	ENSSBOG00000033483	EBNA1BP2	69	40.758	Saimiri_boliviensis_boliviensis
WBGene00015941	C18A3.3	81	36.301	ENSSFOG00015000181	ebna1bp2	85	37.063	Scleropages_formosus
WBGene00015941	C18A3.3	80	42.657	ENSSMAG00000020600	ebna1bp2	82	41.379	Scophthalmus_maximus
WBGene00015941	C18A3.3	75	40.892	ENSSDUG00000013791	ebna1bp2	71	42.478	Seriola_dumerili
WBGene00015941	C18A3.3	82	40.273	ENSSLDG00000001599	ebna1bp2	71	42.478	Seriola_lalandi_dorsalis
WBGene00015941	C18A3.3	81	34.483	ENSSPUG00000007065	EBNA1BP2	61	35.500	Sphenodon_punctatus
WBGene00015941	C18A3.3	75	43.284	ENSSPAG00000005176	ebna1bp2	65	44.878	Stegastes_partitus
WBGene00015941	C18A3.3	83	37.919	ENSSSCG00000030177	EBNA1BP2	68	40.000	Sus_scrofa
WBGene00015941	C18A3.3	66	41.810	ENSTGUG00000016447	-	60	44.156	Taeniopygia_guttata
WBGene00015941	C18A3.3	74	41.379	ENSTGUG00000007072	-	65	42.857	Taeniopygia_guttata
WBGene00015941	C18A3.3	80	42.308	ENSTRUG00000018483	ebna1bp2	65	45.192	Takifugu_rubripes
WBGene00015941	C18A3.3	80	42.123	ENSTNIG00000018092	ebna1bp2	72	45.045	Tetraodon_nigroviridis
WBGene00015941	C18A3.3	83	33.221	ENSTBEG00000011855	EBNA1BP2	69	33.175	Tupaia_belangeri
WBGene00015941	C18A3.3	83	37.584	ENSTTRG00000008056	EBNA1BP2	69	40.000	Tursiops_truncatus
WBGene00015941	C18A3.3	83	38.047	ENSUAMG00000024165	EBNA1BP2	69	40.952	Ursus_americanus
WBGene00015941	C18A3.3	83	38.047	ENSUMAG00000024357	EBNA1BP2	69	40.952	Ursus_maritimus
WBGene00015941	C18A3.3	83	37.710	ENSVVUG00000008712	EBNA1BP2	69	40.094	Vulpes_vulpes
WBGene00015941	C18A3.3	87	37.224	ENSXETG00000009545	ebna1bp2	87	37.671	Xenopus_tropicalis
WBGene00015941	C18A3.3	75	39.927	ENSXCOG00000007104	ebna1bp2	75	39.568	Xiphophorus_couchianus
WBGene00015941	C18A3.3	79	39.576	ENSXMAG00000011341	ebna1bp2	66	42.079	Xiphophorus_maculatus