EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00016142 (Gene tree)
Gene ID: -
Gene Symbol: mrps-18C
Alias: -
Full Name: Putative 39S ribosomal protein L3%2C mitochondrial
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 1646 bases
Position: chrIII:4935578-4937223
Accession: P49404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C26E6	Ribosomal_L3	PF00297.22	4.6e-19	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C26E6.6	-	1365	NM_065644	C26E6.6	403 (aa)	NP_498045	P49404

Gene Model

Click here to download WBGene00016142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00016142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00016142	mrps-18C	63	40.078	ENSG00000114686	MRPL3	99	38.095	Homo_sapiens
WBGene00016142	mrps-18C	70	37.153	ENSAPOG00000006179	mrpl3	80	36.364	Acanthochromis_polyacanthus
WBGene00016142	mrps-18C	70	39.298	ENSAMEG00000014272	MRPL3	61	41.564	Ailuropoda_melanoleuca
WBGene00016142	mrps-18C	59	30.992	ENSACIG00000009210	-	63	30.992	Amphilophus_citrinellus
WBGene00016142	mrps-18C	70	37.847	ENSACIG00000015992	mrpl3	76	37.413	Amphilophus_citrinellus
WBGene00016142	mrps-18C	70	37.153	ENSAOCG00000024456	mrpl3	75	36.014	Amphiprion_ocellaris
WBGene00016142	mrps-18C	70	37.153	ENSAPEG00000015997	mrpl3	76	39.506	Amphiprion_percula
WBGene00016142	mrps-18C	59	40.083	ENSATEG00000017145	mrpl3	75	36.585	Anabas_testudineus
WBGene00016142	mrps-18C	70	37.631	ENSAPLG00000011128	MRPL3	81	36.585	Anas_platyrhynchos
WBGene00016142	mrps-18C	80	33.742	ENSACAG00000001596	MRPL3	84	32.822	Anolis_carolinensis
WBGene00016142	mrps-18C	70	38.246	ENSANAG00000023191	-	65	40.741	Aotus_nancymaae
WBGene00016142	mrps-18C	70	38.889	ENSANAG00000021528	-	73	37.716	Aotus_nancymaae
WBGene00016142	mrps-18C	59	40.741	ENSACLG00000020843	mrpl3	67	40.741	Astatotilapia_calliptera
WBGene00016142	mrps-18C	64	38.403	ENSAMXG00000043612	mrpl3	66	39.095	Astyanax_mexicanus
WBGene00016142	mrps-18C	70	37.895	ENSBTAG00000030942	MRPL3	66	39.918	Bos_taurus
WBGene00016142	mrps-18C	70	38.246	ENSCJAG00000003143	MRPL3	73	37.193	Callithrix_jacchus
WBGene00016142	mrps-18C	70	38.596	ENSCAFG00000006125	MRPL3	66	40.741	Canis_familiaris
WBGene00016142	mrps-18C	70	38.596	ENSCAFG00020027448	MRPL3	66	40.741	Canis_lupus_dingo
WBGene00016142	mrps-18C	70	37.676	ENSCHIG00000024783	MRPL3	66	39.506	Capra_hircus
WBGene00016142	mrps-18C	63	38.697	ENSTSYG00000003691	MRPL3	66	38.866	Carlito_syrichta
WBGene00016142	mrps-18C	50	40.887	ENSCAPG00000013574	MRPL3	61	41.935	Cavia_aperea
WBGene00016142	mrps-18C	63	40.078	ENSCPOG00000021216	MRPL3	66	40.329	Cavia_porcellus
WBGene00016142	mrps-18C	70	39.446	ENSCCAG00000030011	MRPL3	73	38.408	Cebus_capucinus
WBGene00016142	mrps-18C	63	38.911	ENSCATG00000038023	MRPL3	66	39.095	Cercocebus_atys
WBGene00016142	mrps-18C	64	40.000	ENSCLAG00000003513	MRPL3	66	40.741	Chinchilla_lanigera
WBGene00016142	mrps-18C	63	38.911	ENSCSAG00000010510	MRPL3	66	39.095	Chlorocebus_sabaeus
WBGene00016142	mrps-18C	70	35.915	ENSCPBG00000022852	MRPL3	73	35.106	Chrysemys_picta_bellii
WBGene00016142	mrps-18C	65	31.481	ENSCING00000008395	-	60	31.727	Ciona_intestinalis
WBGene00016142	mrps-18C	55	32.579	ENSCSAVG00000006945	-	84	30.924	Ciona_savignyi
WBGene00016142	mrps-18C	63	38.911	ENSCANG00000031568	MRPL3	66	39.095	Colobus_angolensis_palliatus
WBGene00016142	mrps-18C	61	41.434	ENSCGRG00001016688	Mrpl3	66	41.393	Cricetulus_griseus_chok1gshd
WBGene00016142	mrps-18C	61	41.036	ENSCGRG00000015457	Mrpl3	57	40.984	Cricetulus_griseus_crigri
WBGene00016142	mrps-18C	70	36.140	ENSCSEG00000008636	mrpl3	75	36.140	Cynoglossus_semilaevis
WBGene00016142	mrps-18C	59	39.918	ENSCVAG00000011820	mrpl3	67	39.918	Cyprinodon_variegatus
WBGene00016142	mrps-18C	64	39.535	ENSDARG00000103318	mrpl3	66	40.741	Danio_rerio
WBGene00016142	mrps-18C	63	39.689	ENSDNOG00000047253	MRPL3	65	39.506	Dasypus_novemcinctus
WBGene00016142	mrps-18C	55	41.256	ENSDORG00000029436	Mrpl3	77	41.256	Dipodomys_ordii
WBGene00016142	mrps-18C	63	35.547	FBgn0030686	mRpL3	65	37.917	Drosophila_melanogaster
WBGene00016142	mrps-18C	63	37.743	ENSETEG00000010458	MRPL3	66	38.017	Echinops_telfairi
WBGene00016142	mrps-18C	55	41.964	ENSEBUG00000009944	mrpl3	71	41.964	Eptatretus_burgeri
WBGene00016142	mrps-18C	63	40.078	ENSEASG00005005550	MRPL3	64	40.329	Equus_asinus_asinus
WBGene00016142	mrps-18C	70	38.246	ENSECAG00000016736	MRPL3	66	41.152	Equus_caballus
WBGene00016142	mrps-18C	63	36.965	ENSEEUG00000015033	MRPL3	90	37.037	Erinaceus_europaeus
WBGene00016142	mrps-18C	66	36.431	ENSELUG00000003470	mrpl3	68	40.265	Esox_lucius
WBGene00016142	mrps-18C	70	37.544	ENSFCAG00000006335	MRPL3	66	39.918	Felis_catus
WBGene00016142	mrps-18C	70	37.631	ENSFALG00000012506	MRPL3	75	36.140	Ficedula_albicollis
WBGene00016142	mrps-18C	63	41.154	ENSFDAG00000017320	MRPL3	66	41.633	Fukomys_damarensis
WBGene00016142	mrps-18C	70	37.063	ENSFHEG00000023451	mrpl3	78	37.063	Fundulus_heteroclitus
WBGene00016142	mrps-18C	59	39.506	ENSGMOG00000017025	mrpl3	81	36.237	Gadus_morhua
WBGene00016142	mrps-18C	70	37.282	ENSGALG00000040873	MRPL3	74	36.458	Gallus_gallus
WBGene00016142	mrps-18C	71	36.770	ENSGAFG00000018445	mrpl3	76	36.082	Gambusia_affinis
WBGene00016142	mrps-18C	70	38.028	ENSGACG00000006011	mrpl3	75	38.028	Gasterosteus_aculeatus
WBGene00016142	mrps-18C	70	35.915	ENSGAGG00000019040	MRPL3	73	35.461	Gopherus_agassizii
WBGene00016142	mrps-18C	63	40.078	ENSGGOG00000011128	MRPL3	66	40.329	Gorilla_gorilla
WBGene00016142	mrps-18C	59	40.741	ENSHBUG00000019966	mrpl3	67	40.741	Haplochromis_burtoni
WBGene00016142	mrps-18C	70	39.161	ENSHGLG00000016782	MRPL3	66	41.463	Heterocephalus_glaber_female
WBGene00016142	mrps-18C	70	39.161	ENSHGLG00100014743	MRPL3	66	41.463	Heterocephalus_glaber_male
WBGene00016142	mrps-18C	70	35.664	ENSHCOG00000011011	mrpl3	76	35.664	Hippocampus_comes
WBGene00016142	mrps-18C	62	40.392	ENSIPUG00000011902	mrpl3	66	40.741	Ictalurus_punctatus
WBGene00016142	mrps-18C	70	39.236	ENSSTOG00000012804	MRPL3	73	38.542	Ictidomys_tridecemlineatus
WBGene00016142	mrps-18C	62	39.286	ENSJJAG00000006706	Mrpl3	66	39.256	Jaculus_jaculus
WBGene00016142	mrps-18C	70	35.333	ENSKMAG00000002193	mrpl3	92	33.819	Kryptolebias_marmoratus
WBGene00016142	mrps-18C	70	37.413	ENSLBEG00000000445	mrpl3	75	37.413	Labrus_bergylta
WBGene00016142	mrps-18C	69	37.809	ENSLOCG00000001514	mrpl3	75	37.102	Lepisosteus_oculatus
WBGene00016142	mrps-18C	64	37.692	ENSLAFG00000012176	MRPL3	66	38.272	Loxodonta_africana
WBGene00016142	mrps-18C	63	38.521	ENSMFAG00000003455	MRPL3	66	38.683	Macaca_fascicularis
WBGene00016142	mrps-18C	63	38.521	ENSMMUG00000000220	MRPL3	66	38.683	Macaca_mulatta
WBGene00016142	mrps-18C	63	38.521	ENSMNEG00000042711	MRPL3	66	38.683	Macaca_nemestrina
WBGene00016142	mrps-18C	63	38.911	ENSMLEG00000029925	MRPL3	66	39.095	Mandrillus_leucophaeus
WBGene00016142	mrps-18C	70	37.500	ENSMAMG00000010715	mrpl3	75	37.063	Mastacembelus_armatus
WBGene00016142	mrps-18C	59	40.741	ENSMZEG00005006750	mrpl3	67	40.741	Maylandia_zebra
WBGene00016142	mrps-18C	71	37.500	ENSMGAG00000011444	MRPL3	81	36.806	Meleagris_gallopavo
WBGene00016142	mrps-18C	61	40.239	ENSMAUG00000006653	Mrpl3	66	40.164	Mesocricetus_auratus
WBGene00016142	mrps-18C	63	40.467	ENSMICG00000049541	-	66	40.741	Microcebus_murinus
WBGene00016142	mrps-18C	70	37.193	ENSMICG00000033138	-	66	40.741	Microcebus_murinus
WBGene00016142	mrps-18C	70	37.895	ENSMOCG00000019372	Mrpl3	66	40.984	Microtus_ochrogaster
WBGene00016142	mrps-18C	56	41.410	ENSMMOG00000019894	mrpl3	64	42.791	Mola_mola
WBGene00016142	mrps-18C	70	36.140	ENSMODG00000011873	MRPL3	73	35.439	Monodelphis_domestica
WBGene00016142	mrps-18C	70	36.806	ENSMALG00000017620	mrpl3	79	36.364	Monopterus_albus
WBGene00016142	mrps-18C	70	37.193	MGP_CAROLIEiJ_G0032601	Mrpl3	68	41.964	Mus_caroli
WBGene00016142	mrps-18C	70	37.762	ENSMUSG00000032563	Mrpl3	68	41.964	Mus_musculus
WBGene00016142	mrps-18C	63	39.922	MGP_PahariEiJ_G0015469	Mrpl3	67	41.333	Mus_pahari
WBGene00016142	mrps-18C	70	38.112	MGP_SPRETEiJ_G0033747	Mrpl3	68	41.964	Mus_spretus
WBGene00016142	mrps-18C	70	38.596	ENSMPUG00000010052	MRPL3	66	40.741	Mustela_putorius_furo
WBGene00016142	mrps-18C	64	41.445	ENSMLUG00000008515	MRPL3	66	41.767	Myotis_lucifugus
WBGene00016142	mrps-18C	63	40.467	ENSNGAG00000010660	Mrpl3	66	40.741	Nannospalax_galili
WBGene00016142	mrps-18C	59	40.329	ENSNBRG00000009401	mrpl3	75	37.413	Neolamprologus_brichardi
WBGene00016142	mrps-18C	63	39.300	ENSNLEG00000002810	MRPL3	66	39.506	Nomascus_leucogenys
WBGene00016142	mrps-18C	62	32.143	ENSMEUG00000016391	MRPL3	72	31.687	Notamacropus_eugenii
WBGene00016142	mrps-18C	63	35.409	ENSOPRG00000000501	MRPL3	72	35.391	Ochotona_princeps
WBGene00016142	mrps-18C	58	40.506	ENSODEG00000018142	-	70	40.506	Octodon_degus
WBGene00016142	mrps-18C	65	39.544	ENSODEG00000018670	-	66	40.329	Octodon_degus
WBGene00016142	mrps-18C	59	41.152	ENSONIG00000002051	mrpl3	59	41.152	Oreochromis_niloticus
WBGene00016142	mrps-18C	61	40.323	ENSOANG00000006770	MRPL3	89	40.693	Ornithorhynchus_anatinus
WBGene00016142	mrps-18C	63	40.078	ENSOCUG00000002951	MRPL3	66	41.152	Oryctolagus_cuniculus
WBGene00016142	mrps-18C	70	37.500	ENSORLG00000003736	mrpl3	67	39.918	Oryzias_latipes
WBGene00016142	mrps-18C	59	39.918	ENSORLG00020002193	mrpl3	67	39.918	Oryzias_latipes_hni
WBGene00016142	mrps-18C	70	37.500	ENSORLG00015012654	mrpl3	67	39.918	Oryzias_latipes_hsok
WBGene00016142	mrps-18C	70	37.847	ENSOMEG00000015235	mrpl3	76	37.153	Oryzias_melastigma
WBGene00016142	mrps-18C	63	41.634	ENSOGAG00000016133	MRPL3	62	41.564	Otolemur_garnettii
WBGene00016142	mrps-18C	70	37.544	ENSOARG00000009221	MRPL3	63	39.506	Ovis_aries
WBGene00016142	mrps-18C	63	39.300	ENSPPAG00000015358	MRPL3	66	39.506	Pan_paniscus
WBGene00016142	mrps-18C	65	37.218	ENSPPAG00000034479	-	75	36.742	Pan_paniscus
WBGene00016142	mrps-18C	70	37.544	ENSPPRG00000015417	MRPL3	66	39.918	Panthera_pardus
WBGene00016142	mrps-18C	70	36.842	ENSPTIG00000012251	MRPL3	61	39.918	Panthera_tigris_altaica
WBGene00016142	mrps-18C	63	39.689	ENSPTRG00000015396	MRPL3	66	39.918	Pan_troglodytes
WBGene00016142	mrps-18C	65	37.218	ENSPTRG00000045519	-	75	36.742	Pan_troglodytes
WBGene00016142	mrps-18C	63	38.911	ENSPANG00000017085	MRPL3	66	39.095	Papio_anubis
WBGene00016142	mrps-18C	66	40.590	ENSPKIG00000023678	mrpl3	60	43.946	Paramormyrops_kingsleyae
WBGene00016142	mrps-18C	67	34.926	ENSPSIG00000002908	MRPL3	88	37.719	Pelodiscus_sinensis
WBGene00016142	mrps-18C	55	41.778	ENSPMGG00000023558	mrpl3	88	36.458	Periophthalmus_magnuspinnatus
WBGene00016142	mrps-18C	64	40.230	ENSPEMG00000012061	Mrpl3	66	40.984	Peromyscus_maniculatus_bairdii
WBGene00016142	mrps-18C	70	39.716	ENSPMAG00000003407	mrpl3	79	37.895	Petromyzon_marinus
WBGene00016142	mrps-18C	62	39.286	ENSPCIG00000023992	MRPL3	75	35.439	Phascolarctos_cinereus
WBGene00016142	mrps-18C	71	36.301	ENSPFOG00000002850	mrpl3	68	38.866	Poecilia_formosa
WBGene00016142	mrps-18C	71	36.426	ENSPLAG00000002981	mrpl3	67	39.024	Poecilia_latipinna
WBGene00016142	mrps-18C	71	36.426	ENSPMEG00000002060	mrpl3	67	39.024	Poecilia_mexicana
WBGene00016142	mrps-18C	71	36.426	ENSPREG00000003943	mrpl3	67	39.024	Poecilia_reticulata
WBGene00016142	mrps-18C	63	38.911	ENSPPYG00000014102	MRPL3	61	39.076	Pongo_abelii
WBGene00016142	mrps-18C	63	40.467	ENSPCOG00000017228	MRPL3	66	40.741	Propithecus_coquereli
WBGene00016142	mrps-18C	70	37.544	ENSPVAG00000012966	MRPL3	66	39.918	Pteropus_vampyrus
WBGene00016142	mrps-18C	59	40.329	ENSPNYG00000008358	mrpl3	67	40.329	Pundamilia_nyererei
WBGene00016142	mrps-18C	64	37.931	ENSPNAG00000000723	mrpl3	66	39.095	Pygocentrus_nattereri
WBGene00016142	mrps-18C	63	41.085	ENSRNOG00000012650	Mrpl3	66	41.393	Rattus_norvegicus
WBGene00016142	mrps-18C	63	38.911	ENSRBIG00000033474	MRPL3	66	39.095	Rhinopithecus_bieti
WBGene00016142	mrps-18C	63	38.911	ENSRROG00000040393	MRPL3	66	39.095	Rhinopithecus_roxellana
WBGene00016142	mrps-18C	56	30.263	YGR220C	MRPL9	79	30.263	Saccharomyces_cerevisiae
WBGene00016142	mrps-18C	70	36.842	ENSSBOG00000021018	MRPL3	73	35.789	Saimiri_boliviensis_boliviensis
WBGene00016142	mrps-18C	64	38.202	ENSSHAG00000000330	MRPL3	80	36.749	Sarcophilus_harrisii
WBGene00016142	mrps-18C	69	38.516	ENSSFOG00015023683	mrpl3	78	37.367	Scleropages_formosus
WBGene00016142	mrps-18C	70	37.500	ENSSMAG00000011689	mrpl3	75	36.713	Scophthalmus_maximus
WBGene00016142	mrps-18C	59	39.506	ENSSDUG00000007598	mrpl3	67	39.506	Seriola_dumerili
WBGene00016142	mrps-18C	59	39.506	ENSSLDG00000008264	mrpl3	67	39.506	Seriola_lalandi_dorsalis
WBGene00016142	mrps-18C	70	32.509	ENSSARG00000003782	MRPL3	57	37.264	Sorex_araneus
WBGene00016142	mrps-18C	70	35.540	ENSSPUG00000002872	MRPL3	73	34.843	Sphenodon_punctatus
WBGene00016142	mrps-18C	70	37.847	ENSSPAG00000021726	mrpl3	67	40.741	Stegastes_partitus
WBGene00016142	mrps-18C	70	37.193	ENSSSCG00000011179	MRPL3	57	39.918	Sus_scrofa
WBGene00016142	mrps-18C	67	36.765	ENSTGUG00000004204	-	99	34.444	Taeniopygia_guttata
WBGene00016142	mrps-18C	70	36.111	ENSTRUG00000009650	mrpl3	77	35.315	Takifugu_rubripes
WBGene00016142	mrps-18C	59	39.506	ENSTNIG00000006434	mrpl3	76	36.713	Tetraodon_nigroviridis
WBGene00016142	mrps-18C	63	35.798	ENSTTRG00000010358	MRPL3	66	35.802	Tursiops_truncatus
WBGene00016142	mrps-18C	70	37.895	ENSUAMG00000000526	MRPL3	65	40.741	Ursus_americanus
WBGene00016142	mrps-18C	70	37.895	ENSUMAG00000017621	MRPL3	59	40.741	Ursus_maritimus
WBGene00016142	mrps-18C	70	38.596	ENSVVUG00000002847	MRPL3	66	40.741	Vulpes_vulpes
WBGene00016142	mrps-18C	70	32.867	ENSXETG00000001845	mrpl3	86	30.275	Xenopus_tropicalis
WBGene00016142	mrps-18C	60	37.302	ENSXCOG00000020178	mrpl3	76	37.302	Xiphophorus_couchianus
WBGene00016142	mrps-18C	60	39.024	ENSXMAG00000002586	mrpl3	75	36.426	Xiphophorus_maculatus