EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00016977 (Gene tree)
Gene ID: -
Gene Symbol: akap-1
Alias: -
Full Name: KH domain-containing protein akap-1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 13277 bases
Position: chrIII:6353384-6366660
Accession: Q09285
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C56G2	KH_1	PF00013.29	6.6e-11	1	1
C56G2	KH_1	PF00013.29	6.6e-11	1	1
C56G2	KH_1	PF00013.29	1.3e-10	1	1
C56G2	TUDOR	PF00567.24	1.6e-24	1	1
C56G2	TUDOR	PF00567.24	1.6e-24	1	1
C56G2	TUDOR	PF00567.24	4.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C56G2.1b.1	-	3136	-	C56G2.1b.1	409 (aa)	-	UPI000002B717
C56G2.1b.2	-	1738	NM_171164	C56G2.1b.2	409 (aa)	NP_741191	UPI000002B717
C56G2.1a	-	3925	-	C56G2.1a	867 (aa)	NP_741190	Q09285

Gene Model

Click here to download WBGene00016977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00016977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00016977	akap-1	75	34.628	ENSG00000121057	AKAP1	98	38.122	Homo_sapiens
WBGene00016977	akap-1	65	36.567	ENSACAG00000008920	AKAP1	83	36.727	Anolis_carolinensis
WBGene00016977	akap-1	75	34.628	ENSANAG00000032242	AKAP1	54	33.939	Aotus_nancymaae
WBGene00016977	akap-1	75	34.628	ENSCJAG00000013990	AKAP1	54	33.939	Callithrix_jacchus
WBGene00016977	akap-1	75	34.628	ENSCCAG00000023539	AKAP1	54	33.939	Cebus_capucinus
WBGene00016977	akap-1	75	34.628	ENSCATG00000043975	AKAP1	54	33.939	Cercocebus_atys
WBGene00016977	akap-1	50	32.353	ENSCING00000013623	-	89	32.039	Ciona_intestinalis
WBGene00016977	akap-1	75	33.007	ENSCANG00000042158	-	54	31.515	Colobus_angolensis_palliatus
WBGene00016977	akap-1	75	34.628	ENSCANG00000011430	-	54	33.939	Colobus_angolensis_palliatus
WBGene00016977	akap-1	74	33.876	ENSELUG00000011820	-	63	33.444	Esox_lucius
WBGene00016977	akap-1	75	34.628	ENSGGOG00000011719	AKAP1	54	33.939	Gorilla_gorilla
WBGene00016977	akap-1	75	34.628	ENSMFAG00000042936	AKAP1	54	33.939	Macaca_fascicularis
WBGene00016977	akap-1	69	35.315	ENSMMUG00000012644	AKAP1	98	38.122	Macaca_mulatta
WBGene00016977	akap-1	75	34.628	ENSMNEG00000001016	AKAP1	54	33.939	Macaca_nemestrina
WBGene00016977	akap-1	75	34.628	ENSMLEG00000036269	AKAP1	54	33.939	Mandrillus_leucophaeus
WBGene00016977	akap-1	75	34.641	ENSMODG00000028428	-	89	34.641	Monodelphis_domestica
WBGene00016977	akap-1	75	33.987	ENSNGAG00000014799	-	50	33.987	Nannospalax_galili
WBGene00016977	akap-1	75	34.628	ENSNLEG00000031371	AKAP1	54	33.939	Nomascus_leucogenys
WBGene00016977	akap-1	51	30.000	ENSORLG00015013428	-	64	31.250	Oryzias_latipes_hsok
WBGene00016977	akap-1	75	34.304	ENSPPAG00000031095	AKAP1	54	33.333	Pan_paniscus
WBGene00016977	akap-1	75	34.304	ENSPTRG00000009436	AKAP1	54	33.333	Pan_troglodytes
WBGene00016977	akap-1	75	34.628	ENSPANG00000022318	AKAP1	54	33.939	Papio_anubis
WBGene00016977	akap-1	68	34.276	ENSPKIG00000007175	-	52	34.416	Paramormyrops_kingsleyae
WBGene00016977	akap-1	75	34.628	ENSRBIG00000033113	AKAP1	54	33.939	Rhinopithecus_bieti
WBGene00016977	akap-1	75	34.628	ENSRROG00000010936	AKAP1	54	33.939	Rhinopithecus_roxellana
WBGene00016977	akap-1	75	34.628	ENSSBOG00000019056	AKAP1	54	33.939	Saimiri_boliviensis_boliviensis
WBGene00016977	akap-1	77	32.808	ENSTGUG00000008464	-	78	32.597	Taeniopygia_guttata
WBGene00016977	akap-1	82	32.738	ENSTNIG00000004987	akap1b	83	31.443	Tetraodon_nigroviridis