EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00017085 (Gene tree)
Gene ID: -
Gene Symbol: E01A2.2
Alias: -
Full Name: Serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 2740 bases
Position: chrI:4132500-4135239
Accession: Q966L5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
E01A2	ARS2	PF04959.13	2.1e-59	1	1
E01A2	ARS2	PF04959.13	7.1e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
E01A2.2b	-	1924	NM_182055	E01A2.2b	529 (aa)	NP_871855	UPI0000002693
E01A2.2a	-	2315	NM_058901	E01A2.2a	712 (aa)	NP_491302	Q966L5

Gene Model

Click here to download WBGene00017085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00017085's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00017085	E01A2.2	85	43.067	ENSG00000087087	SRRT	94	47.727	Homo_sapiens
WBGene00017085	E01A2.2	85	42.159	ENSAPOG00000002304	srrt	67	42.568	Acanthochromis_polyacanthus
WBGene00017085	E01A2.2	80	47.500	ENSAMEG00000014506	SRRT	54	47.656	Ailuropoda_melanoleuca
WBGene00017085	E01A2.2	85	42.593	ENSACIG00000015795	srrt	70	41.443	Amphilophus_citrinellus
WBGene00017085	E01A2.2	85	42.159	ENSAOCG00000009693	srrt	71	40.461	Amphiprion_ocellaris
WBGene00017085	E01A2.2	85	39.669	ENSAOCG00000009189	-	59	42.500	Amphiprion_ocellaris
WBGene00017085	E01A2.2	85	39.669	ENSAPEG00000020016	-	60	42.500	Amphiprion_percula
WBGene00017085	E01A2.2	85	42.159	ENSAPEG00000003646	srrt	71	41.513	Amphiprion_percula
WBGene00017085	E01A2.2	88	41.975	ENSATEG00000014425	srrt	71	40.196	Anabas_testudineus
WBGene00017085	E01A2.2	68	42.857	ENSATEG00000003652	-	74	40.465	Anabas_testudineus
WBGene00017085	E01A2.2	85	41.429	ENSACAG00000001014	SRRT	59	46.094	Anolis_carolinensis
WBGene00017085	E01A2.2	85	42.505	ENSANAG00000031718	SRRT	61	45.775	Aotus_nancymaae
WBGene00017085	E01A2.2	85	41.513	ENSACLG00000013156	srrt	59	45.833	Astatotilapia_calliptera
WBGene00017085	E01A2.2	85	39.381	ENSACLG00000009423	-	59	41.163	Astatotilapia_calliptera
WBGene00017085	E01A2.2	84	41.113	ENSAMXG00000016671	srrt	72	42.350	Astyanax_mexicanus
WBGene00017085	E01A2.2	85	42.710	ENSBTAG00000001134	SRRT	71	39.506	Bos_taurus
WBGene00017085	E01A2.2	85	42.505	ENSCJAG00000014917	SRRT	61	47.656	Callithrix_jacchus
WBGene00017085	E01A2.2	85	42.916	ENSCAFG00000023538	SRRT	60	47.656	Canis_familiaris
WBGene00017085	E01A2.2	85	43.396	ENSCAFG00020013358	SRRT	63	47.656	Canis_lupus_dingo
WBGene00017085	E01A2.2	85	43.478	ENSCHIG00000010495	SRRT	61	47.656	Capra_hircus
WBGene00017085	E01A2.2	85	42.857	ENSTSYG00000036426	SRRT	64	47.656	Carlito_syrichta
WBGene00017085	E01A2.2	83	48.438	ENSCAPG00000013586	SRRT	77	42.227	Cavia_aperea
WBGene00017085	E01A2.2	83	48.438	ENSCPOG00000001739	SRRT	60	48.438	Cavia_porcellus
WBGene00017085	E01A2.2	85	42.505	ENSCCAG00000015877	SRRT	60	47.656	Cebus_capucinus
WBGene00017085	E01A2.2	85	42.857	ENSCATG00000036306	SRRT	61	47.656	Cercocebus_atys
WBGene00017085	E01A2.2	85	42.505	ENSCLAG00000007568	SRRT	76	42.080	Chinchilla_lanigera
WBGene00017085	E01A2.2	85	42.505	ENSCSAG00000017996	SRRT	60	47.656	Chlorocebus_sabaeus
WBGene00017085	E01A2.2	62	49.167	ENSCHOG00000007815	SRRT	60	49.219	Choloepus_hoffmanni
WBGene00017085	E01A2.2	99	31.327	ENSCPBG00000011553	SRRT	67	35.294	Chrysemys_picta_bellii
WBGene00017085	E01A2.2	94	38.523	ENSCING00000003506	-	67	41.837	Ciona_intestinalis
WBGene00017085	E01A2.2	92	41.611	ENSCSAVG00000008394	-	91	40.309	Ciona_savignyi
WBGene00017085	E01A2.2	85	42.857	ENSCANG00000034556	SRRT	60	47.656	Colobus_angolensis_palliatus
WBGene00017085	E01A2.2	85	42.739	ENSCGRG00001001594	Srrt	60	45.084	Cricetulus_griseus_chok1gshd
WBGene00017085	E01A2.2	85	41.837	ENSCGRG00000007292	Srrt	72	42.482	Cricetulus_griseus_crigri
WBGene00017085	E01A2.2	85	40.671	ENSCSEG00000005233	-	71	34.628	Cynoglossus_semilaevis
WBGene00017085	E01A2.2	85	40.466	ENSCSEG00000017878	srrt	62	41.591	Cynoglossus_semilaevis
WBGene00017085	E01A2.2	88	42.418	ENSCVAG00000019848	srrt	63	45.910	Cyprinodon_variegatus
WBGene00017085	E01A2.2	84	41.136	ENSCVAG00000017344	-	77	37.143	Cyprinodon_variegatus
WBGene00017085	E01A2.2	85	41.649	ENSDARG00000017762	srrt	73	42.478	Danio_rerio
WBGene00017085	E01A2.2	85	42.505	ENSDNOG00000003851	SRRT	61	45.775	Dasypus_novemcinctus
WBGene00017085	E01A2.2	85	43.368	ENSDORG00000005584	Srrt	77	41.882	Dipodomys_ordii
WBGene00017085	E01A2.2	77	44.578	FBgn0033062	Ars2	72	43.284	Drosophila_melanogaster
WBGene00017085	E01A2.2	85	41.247	ENSETEG00000016175	SRRT	51	48.936	Echinops_telfairi
WBGene00017085	E01A2.2	99	36.271	ENSEBUG00000008517	-	72	38.899	Eptatretus_burgeri
WBGene00017085	E01A2.2	85	42.505	ENSEASG00005016956	SRRT	61	47.656	Equus_asinus_asinus
WBGene00017085	E01A2.2	85	42.505	ENSECAG00000012292	SRRT	61	47.656	Equus_caballus
WBGene00017085	E01A2.2	88	39.248	ENSELUG00000021216	-	68	41.905	Esox_lucius
WBGene00017085	E01A2.2	85	41.856	ENSELUG00000006651	srrt	65	43.981	Esox_lucius
WBGene00017085	E01A2.2	85	42.505	ENSFCAG00000006855	SRRT	60	47.656	Felis_catus
WBGene00017085	E01A2.2	85	43.197	ENSFDAG00000021347	SRRT	73	44.503	Fukomys_damarensis
WBGene00017085	E01A2.2	85	34.238	ENSFHEG00000004105	-	70	36.605	Fundulus_heteroclitus
WBGene00017085	E01A2.2	88	38.897	ENSFHEG00000002756	srrt	67	40.143	Fundulus_heteroclitus
WBGene00017085	E01A2.2	69	46.883	ENSGMOG00000018619	srrt	62	44.737	Gadus_morhua
WBGene00017085	E01A2.2	83	41.253	ENSGMOG00000018694	-	72	37.380	Gadus_morhua
WBGene00017085	E01A2.2	85	42.616	ENSGAFG00000005423	srrt	61	45.833	Gambusia_affinis
WBGene00017085	E01A2.2	85	40.000	ENSGAFG00000020383	-	71	37.908	Gambusia_affinis
WBGene00017085	E01A2.2	85	42.355	ENSGACG00000020387	srrt	63	42.466	Gasterosteus_aculeatus
WBGene00017085	E01A2.2	70	42.063	ENSGACG00000001100	-	57	41.969	Gasterosteus_aculeatus
WBGene00017085	E01A2.2	85	42.857	ENSGGOG00000001508	SRRT	60	47.656	Gorilla_gorilla
WBGene00017085	E01A2.2	84	43.243	ENSHBUG00000002942	srrt	61	43.243	Haplochromis_burtoni
WBGene00017085	E01A2.2	80	47.500	ENSHGLG00000008344	Srrt	68	44.094	Heterocephalus_glaber_female
WBGene00017085	E01A2.2	85	42.857	ENSHGLG00100018857	Srrt	69	44.503	Heterocephalus_glaber_male
WBGene00017085	E01A2.2	90	41.800	ENSHCOG00000005403	srrt	70	41.167	Hippocampus_comes
WBGene00017085	E01A2.2	85	38.641	ENSHCOG00000008904	-	71	37.605	Hippocampus_comes
WBGene00017085	E01A2.2	81	46.875	ENSIPUG00000021150	srrt	68	41.907	Ictalurus_punctatus
WBGene00017085	E01A2.2	85	42.857	ENSSTOG00000013776	SRRT	60	47.656	Ictidomys_tridecemlineatus
WBGene00017085	E01A2.2	85	42.437	ENSJJAG00000010446	Srrt	77	42.790	Jaculus_jaculus
WBGene00017085	E01A2.2	87	38.353	ENSKMAG00000008468	-	58	43.089	Kryptolebias_marmoratus
WBGene00017085	E01A2.2	88	42.947	ENSKMAG00000013599	srrt	71	38.762	Kryptolebias_marmoratus
WBGene00017085	E01A2.2	59	40.833	ENSLBEG00000028983	-	69	41.129	Labrus_bergylta
WBGene00017085	E01A2.2	85	42.308	ENSLBEG00000016308	srrt	59	46.966	Labrus_bergylta
WBGene00017085	E01A2.2	59	39.308	ENSLACG00000001089	SRRT	72	34.776	Latimeria_chalumnae
WBGene00017085	E01A2.2	67	45.000	ENSLOCG00000013658	srrt	67	47.899	Lepisosteus_oculatus
WBGene00017085	E01A2.2	85	42.505	ENSLAFG00000007725	SRRT	61	47.656	Loxodonta_africana
WBGene00017085	E01A2.2	85	42.857	ENSMFAG00000033745	SRRT	62	47.656	Macaca_fascicularis
WBGene00017085	E01A2.2	85	42.505	ENSMMUG00000021255	SRRT	60	47.656	Macaca_mulatta
WBGene00017085	E01A2.2	85	42.505	ENSMNEG00000041864	SRRT	61	47.656	Macaca_nemestrina
WBGene00017085	E01A2.2	85	42.857	ENSMLEG00000029479	SRRT	61	47.656	Mandrillus_leucophaeus
WBGene00017085	E01A2.2	87	38.384	ENSMAMG00000010681	-	65	41.527	Mastacembelus_armatus
WBGene00017085	E01A2.2	85	41.286	ENSMAMG00000014311	srrt	61	45.833	Mastacembelus_armatus
WBGene00017085	E01A2.2	85	39.381	ENSMZEG00005028002	-	59	41.163	Maylandia_zebra
WBGene00017085	E01A2.2	85	41.513	ENSMZEG00005016135	srrt	59	45.833	Maylandia_zebra
WBGene00017085	E01A2.2	85	42.181	ENSMAUG00000011386	Srrt	78	42.791	Mesocricetus_auratus
WBGene00017085	E01A2.2	85	43.271	ENSMICG00000009471	SRRT	61	47.656	Microcebus_murinus
WBGene00017085	E01A2.2	85	42.181	ENSMOCG00000001971	Srrt	76	42.019	Microtus_ochrogaster
WBGene00017085	E01A2.2	85	42.380	ENSMMOG00000016399	srrt	72	40.291	Mola_mola
WBGene00017085	E01A2.2	85	38.589	ENSMMOG00000011137	-	61	42.667	Mola_mola
WBGene00017085	E01A2.2	85	40.800	ENSMODG00000004862	SRRT	77	43.498	Monodelphis_domestica
WBGene00017085	E01A2.2	98	31.685	ENSMALG00000005567	-	83	33.698	Monopterus_albus
WBGene00017085	E01A2.2	85	41.513	ENSMALG00000018604	srrt	68	44.270	Monopterus_albus
WBGene00017085	E01A2.2	85	42.526	MGP_CAROLIEiJ_G0027870	Srrt	76	42.588	Mus_caroli
WBGene00017085	E01A2.2	85	42.526	ENSMUSG00000037364	Srrt	76	42.588	Mus_musculus
WBGene00017085	E01A2.2	85	42.526	MGP_PahariEiJ_G0024456	Srrt	76	42.588	Mus_pahari
WBGene00017085	E01A2.2	85	42.526	MGP_SPRETEiJ_G0028875	Srrt	76	42.588	Mus_spretus
WBGene00017085	E01A2.2	85	42.505	ENSMPUG00000015839	SRRT	60	47.656	Mustela_putorius_furo
WBGene00017085	E01A2.2	85	41.975	ENSMLUG00000009975	SRRT	66	44.208	Myotis_lucifugus
WBGene00017085	E01A2.2	81	46.875	ENSNGAG00000023715	Srrt	72	46.875	Nannospalax_galili
WBGene00017085	E01A2.2	88	40.994	ENSNBRG00000019100	srrt	73	42.922	Neolamprologus_brichardi
WBGene00017085	E01A2.2	80	46.667	ENSNLEG00000011987	SRRT	74	36.943	Nomascus_leucogenys
WBGene00017085	E01A2.2	81	42.188	ENSMEUG00000011941	SRRT	61	42.188	Notamacropus_eugenii
WBGene00017085	E01A2.2	58	51.064	ENSOPRG00000002502	-	50	47.181	Ochotona_princeps
WBGene00017085	E01A2.2	85	42.857	ENSODEG00000016856	SRRT	77	42.453	Octodon_degus
WBGene00017085	E01A2.2	84	43.243	ENSONIG00000004242	srrt	67	42.857	Oreochromis_niloticus
WBGene00017085	E01A2.2	85	39.712	ENSONIG00000016080	-	60	41.628	Oreochromis_niloticus
WBGene00017085	E01A2.2	85	43.552	ENSORLG00000008120	srrt	59	44.552	Oryzias_latipes
WBGene00017085	E01A2.2	85	43.552	ENSORLG00020003058	srrt	65	44.794	Oryzias_latipes_hni
WBGene00017085	E01A2.2	85	43.340	ENSORLG00015008062	srrt	61	46.296	Oryzias_latipes_hsok
WBGene00017085	E01A2.2	88	40.702	ENSOMEG00000006963	-	62	44.125	Oryzias_melastigma
WBGene00017085	E01A2.2	88	42.675	ENSOMEG00000003155	srrt	76	39.567	Oryzias_melastigma
WBGene00017085	E01A2.2	80	48.333	ENSOGAG00000017242	SRRT	60	48.438	Otolemur_garnettii
WBGene00017085	E01A2.2	85	43.064	ENSOARG00000015645	SRRT	60	47.656	Ovis_aries
WBGene00017085	E01A2.2	85	42.857	ENSPPAG00000041090	SRRT	62	47.656	Pan_paniscus
WBGene00017085	E01A2.2	85	43.064	ENSPPRG00000009557	SRRT	60	47.656	Panthera_pardus
WBGene00017085	E01A2.2	85	42.505	ENSPTIG00000014355	SRRT	60	47.656	Panthera_tigris_altaica
WBGene00017085	E01A2.2	85	42.857	ENSPTRG00000019511	SRRT	64	47.656	Pan_troglodytes
WBGene00017085	E01A2.2	80	47.500	ENSPANG00000020763	SRRT	60	47.656	Papio_anubis
WBGene00017085	E01A2.2	90	41.201	ENSPKIG00000022212	-	66	44.295	Paramormyrops_kingsleyae
WBGene00017085	E01A2.2	93	37.383	ENSPKIG00000005434	srrt	76	37.865	Paramormyrops_kingsleyae
WBGene00017085	E01A2.2	85	44.561	ENSPSIG00000016311	SRRT	66	45.497	Pelodiscus_sinensis
WBGene00017085	E01A2.2	85	41.701	ENSPMGG00000002841	srrt	69	40.401	Periophthalmus_magnuspinnatus
WBGene00017085	E01A2.2	85	42.437	ENSPEMG00000010834	Srrt	76	41.844	Peromyscus_maniculatus_bairdii
WBGene00017085	E01A2.2	88	40.039	ENSPMAG00000009614	-	71	38.301	Petromyzon_marinus
WBGene00017085	E01A2.2	81	48.438	ENSPCIG00000000816	SRRT	62	44.843	Phascolarctos_cinereus
WBGene00017085	E01A2.2	85	38.843	ENSPFOG00000016554	-	70	37.500	Poecilia_formosa
WBGene00017085	E01A2.2	85	42.405	ENSPFOG00000005704	srrt	61	45.833	Poecilia_formosa
WBGene00017085	E01A2.2	85	42.437	ENSPLAG00000021992	srrt	61	45.833	Poecilia_latipinna
WBGene00017085	E01A2.2	85	38.174	ENSPLAG00000004526	-	70	37.313	Poecilia_latipinna
WBGene00017085	E01A2.2	69	42.663	ENSPMEG00000001520	-	72	37.500	Poecilia_mexicana
WBGene00017085	E01A2.2	85	42.194	ENSPMEG00000001182	srrt	69	40.480	Poecilia_mexicana
WBGene00017085	E01A2.2	85	42.405	ENSPREG00000022308	srrt	61	45.833	Poecilia_reticulata
WBGene00017085	E01A2.2	68	47.500	ENSPPYG00000017432	SRRT	67	50.000	Pongo_abelii
WBGene00017085	E01A2.2	80	47.500	ENSPCAG00000001621	SRRT	59	47.500	Procavia_capensis
WBGene00017085	E01A2.2	85	43.064	ENSPCOG00000025751	SRRT	61	47.656	Propithecus_coquereli
WBGene00017085	E01A2.2	85	36.961	ENSPVAG00000000834	SRRT	64	45.000	Pteropus_vampyrus
WBGene00017085	E01A2.2	84	43.243	ENSPNYG00000018710	srrt	69	42.568	Pundamilia_nyererei
WBGene00017085	E01A2.2	56	48.077	ENSPNAG00000010629	srrt	75	32.949	Pygocentrus_nattereri
WBGene00017085	E01A2.2	85	36.458	ENSRNOG00000048277	AABR07035787.1	80	37.674	Rattus_norvegicus
WBGene00017085	E01A2.2	85	42.505	ENSRBIG00000035718	SRRT	60	47.656	Rhinopithecus_bieti
WBGene00017085	E01A2.2	85	42.505	ENSRROG00000030622	SRRT	61	47.656	Rhinopithecus_roxellana
WBGene00017085	E01A2.2	85	42.946	ENSSBOG00000033570	SRRT	64	45.775	Saimiri_boliviensis_boliviensis
WBGene00017085	E01A2.2	85	42.916	ENSSHAG00000007349	-	56	47.644	Sarcophilus_harrisii
WBGene00017085	E01A2.2	85	42.236	ENSSFOG00015017293	srrt	62	46.561	Scleropages_formosus
WBGene00017085	E01A2.2	85	36.853	ENSSMAG00000018195	-	70	36.239	Scophthalmus_maximus
WBGene00017085	E01A2.2	85	41.822	ENSSMAG00000015342	srrt	76	38.831	Scophthalmus_maximus
WBGene00017085	E01A2.2	85	35.760	ENSSDUG00000002051	-	75	37.401	Seriola_dumerili
WBGene00017085	E01A2.2	85	42.710	ENSSDUG00000012049	srrt	63	45.833	Seriola_dumerili
WBGene00017085	E01A2.2	85	42.916	ENSSLDG00000017477	srrt	60	45.985	Seriola_lalandi_dorsalis
WBGene00017085	E01A2.2	85	41.414	ENSSPAG00000005665	srrt	63	43.371	Stegastes_partitus
WBGene00017085	E01A2.2	85	34.395	ENSSPAG00000018943	-	69	40.714	Stegastes_partitus
WBGene00017085	E01A2.2	77	47.500	ENSSSCG00000024789	SRRT	56	47.656	Sus_scrofa
WBGene00017085	E01A2.2	70	42.588	ENSTRUG00000000023	-	56	42.588	Takifugu_rubripes
WBGene00017085	E01A2.2	70	46.825	ENSTRUG00000016075	srrt	55	46.419	Takifugu_rubripes
WBGene00017085	E01A2.2	88	38.969	ENSTNIG00000003111	-	77	34.375	Tetraodon_nigroviridis
WBGene00017085	E01A2.2	61	41.212	ENSTNIG00000019765	-	94	41.515	Tetraodon_nigroviridis
WBGene00017085	E01A2.2	85	42.505	ENSTTRG00000011104	SRRT	60	47.656	Tursiops_truncatus
WBGene00017085	E01A2.2	85	42.505	ENSUAMG00000027997	SRRT	62	47.656	Ursus_americanus
WBGene00017085	E01A2.2	85	42.505	ENSUMAG00000011295	SRRT	60	47.656	Ursus_maritimus
WBGene00017085	E01A2.2	85	42.916	ENSVVUG00000023572	SRRT	60	47.656	Vulpes_vulpes
WBGene00017085	E01A2.2	85	38.843	ENSXETG00000025124	srrt	51	51.786	Xenopus_tropicalis
WBGene00017085	E01A2.2	72	39.231	ENSXCOG00000013105	-	65	40.924	Xiphophorus_couchianus
WBGene00017085	E01A2.2	85	42.616	ENSXMAG00000007627	srrt	70	41.426	Xiphophorus_maculatus
WBGene00017085	E01A2.2	85	38.333	ENSXMAG00000002090	-	71	37.459	Xiphophorus_maculatus