EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00017245 (Gene tree)
Gene ID: -
Gene Symbol: srpa-72
Alias: -
Full Name: Signal recognition particle subunit SRP72
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 5991 bases
Position: chrII:2787481-2793471
Accession: P91240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F08D12	SRP72	PF08492.12	5.6e-18	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F08D12.1	-	2178	NM_061965	F08D12.1	635 (aa)	NP_494366	P91240

Gene Model

Click here to download WBGene00017245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00017245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00017245	srpa-72	76	30.508	ENSCHOG00000013240	SRP72	76	30.508	Choloepus_hoffmanni
WBGene00017245	srpa-72	98	30.804	ENSCING00000002417	-	96	30.551	Ciona_intestinalis
WBGene00017245	srpa-72	96	30.971	ENSCSAVG00000011288	-	97	33.178	Ciona_savignyi
WBGene00017245	srpa-72	72	34.286	ENSCANG00000037920	-	77	33.136	Colobus_angolensis_palliatus
WBGene00017245	srpa-72	86	31.315	ENSDARG00000014139	srp72	96	30.479	Danio_rerio
WBGene00017245	srpa-72	95	31.181	FBgn0038810	Srp72	95	31.181	Drosophila_melanogaster
WBGene00017245	srpa-72	71	38.265	ENSEBUG00000003696	srp72	91	38.806	Eptatretus_burgeri
WBGene00017245	srpa-72	97	30.508	ENSGMOG00000005986	srp72	96	30.817	Gadus_morhua
WBGene00017245	srpa-72	86	30.479	ENSGAGG00000024611	SRP72	91	30.054	Gopherus_agassizii
WBGene00017245	srpa-72	61	32.759	ENSHGLG00000003950	-	67	33.908	Heterocephalus_glaber_female
WBGene00017245	srpa-72	61	32.759	ENSHGLG00100017133	-	67	33.908	Heterocephalus_glaber_male
WBGene00017245	srpa-72	98	32.258	ENSNLEG00000008806	-	96	31.754	Nomascus_leucogenys
WBGene00017245	srpa-72	83	50.000	ENSMEUG00000005164	SRP72	87	42.697	Notamacropus_eugenii
WBGene00017245	srpa-72	62	42.045	ENSOANG00000008562	SRP72	62	42.045	Ornithorhynchus_anatinus
WBGene00017245	srpa-72	89	30.912	ENSPSIG00000003003	SRP72	91	30.068	Pelodiscus_sinensis
WBGene00017245	srpa-72	96	31.669	ENSSFOG00015002026	srp72	95	30.781	Scleropages_formosus
WBGene00017245	srpa-72	74	36.620	ENSTRUG00000009831	srp72	92	40.278	Takifugu_rubripes