EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00017830 (Gene tree)
Gene ID: -
Gene Symbol: rpb-8
Alias: -
Full Name: Probable DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC3
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 905 bases
Position: chrIII:4917104-4918008
Accession: Q19826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F26F4	RNA_pol_Rpb8	PF03870.15	9.7e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F26F4.11	-	712	-	F26F4.11	148 (aa)	NP_498036	Q19826

Gene Model

Click here to download WBGene00017830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00017830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00017830	rpb-8	100	63.333	ENSG00000163882	POLR2H	100	63.333	Homo_sapiens
WBGene00017830	rpb-8	100	62.667	ENSAPOG00000023660	polr2h	100	62.667	Acanthochromis_polyacanthus
WBGene00017830	rpb-8	100	63.333	ENSAMEG00000017011	POLR2H	100	63.333	Ailuropoda_melanoleuca
WBGene00017830	rpb-8	76	59.649	ENSACIG00000013167	polr2h	100	59.649	Amphilophus_citrinellus
WBGene00017830	rpb-8	100	62.667	ENSAOCG00000003084	polr2h	100	62.667	Amphiprion_ocellaris
WBGene00017830	rpb-8	100	62.667	ENSAPEG00000002614	polr2h	100	62.667	Amphiprion_percula
WBGene00017830	rpb-8	100	62.667	ENSATEG00000013227	polr2h	100	62.667	Anabas_testudineus
WBGene00017830	rpb-8	100	63.333	ENSACAG00000002828	POLR2H	100	63.333	Anolis_carolinensis
WBGene00017830	rpb-8	100	63.333	ENSANAG00000020244	POLR2H	100	63.333	Aotus_nancymaae
WBGene00017830	rpb-8	100	62.667	ENSACLG00000026253	polr2h	100	62.667	Astatotilapia_calliptera
WBGene00017830	rpb-8	100	62.667	ENSAMXG00000001800	polr2h	100	62.667	Astyanax_mexicanus
WBGene00017830	rpb-8	100	63.333	ENSBTAG00000040199	POLR2H	100	63.333	Bos_taurus
WBGene00017830	rpb-8	100	63.333	ENSCJAG00000014959	POLR2H	100	63.333	Callithrix_jacchus
WBGene00017830	rpb-8	100	63.333	ENSCAFG00020002558	POLR2H	100	63.333	Canis_lupus_dingo
WBGene00017830	rpb-8	100	63.333	ENSCHIG00000006695	POLR2H	100	63.333	Capra_hircus
WBGene00017830	rpb-8	100	60.000	ENSTSYG00000031691	-	82	60.000	Carlito_syrichta
WBGene00017830	rpb-8	100	55.629	ENSTSYG00000031988	-	100	55.629	Carlito_syrichta
WBGene00017830	rpb-8	100	63.333	ENSTSYG00000007705	-	100	63.333	Carlito_syrichta
WBGene00017830	rpb-8	100	62.667	ENSCPOG00000040303	POLR2H	100	62.667	Cavia_porcellus
WBGene00017830	rpb-8	100	63.333	ENSCCAG00000035087	POLR2H	100	63.333	Cebus_capucinus
WBGene00017830	rpb-8	100	63.333	ENSCATG00000045313	POLR2H	100	63.333	Cercocebus_atys
WBGene00017830	rpb-8	100	62.667	ENSCLAG00000013016	POLR2H	100	62.667	Chinchilla_lanigera
WBGene00017830	rpb-8	100	63.333	ENSCSAG00000013724	POLR2H	80	63.333	Chlorocebus_sabaeus
WBGene00017830	rpb-8	73	61.468	ENSCHOG00000009216	POLR2H	98	61.468	Choloepus_hoffmanni
WBGene00017830	rpb-8	100	63.333	ENSCPBG00000001462	POLR2H	100	63.333	Chrysemys_picta_bellii
WBGene00017830	rpb-8	99	62.000	ENSCING00000011417	-	99	62.000	Ciona_intestinalis
WBGene00017830	rpb-8	99	62.667	ENSCSAVG00000006151	-	99	62.667	Ciona_savignyi
WBGene00017830	rpb-8	100	63.333	ENSCANG00000023708	POLR2H	100	63.333	Colobus_angolensis_palliatus
WBGene00017830	rpb-8	100	63.333	ENSCGRG00001004900	Polr2h	100	63.333	Cricetulus_griseus_chok1gshd
WBGene00017830	rpb-8	100	63.333	ENSCGRG00000014304	Polr2h	100	63.333	Cricetulus_griseus_crigri
WBGene00017830	rpb-8	100	62.667	ENSCSEG00000015264	polr2h	100	62.667	Cynoglossus_semilaevis
WBGene00017830	rpb-8	100	63.333	ENSCVAG00000012410	polr2h	100	63.333	Cyprinodon_variegatus
WBGene00017830	rpb-8	100	63.333	ENSDARG00000038505	polr2h	100	63.333	Danio_rerio
WBGene00017830	rpb-8	100	63.333	ENSDNOG00000044402	POLR2H	100	63.333	Dasypus_novemcinctus
WBGene00017830	rpb-8	100	63.333	ENSDORG00000027475	Polr2h	100	63.333	Dipodomys_ordii
WBGene00017830	rpb-8	100	62.416	FBgn0037121	Rpb8	100	62.416	Drosophila_melanogaster
WBGene00017830	rpb-8	100	52.000	ENSEBUG00000008233	POLR2H	100	52.000	Eptatretus_burgeri
WBGene00017830	rpb-8	100	63.333	ENSEASG00005013088	POLR2H	100	63.333	Equus_asinus_asinus
WBGene00017830	rpb-8	100	63.333	ENSECAG00000005828	POLR2H	100	63.333	Equus_caballus
WBGene00017830	rpb-8	55	60.976	ENSEEUG00000006139	-	99	60.976	Erinaceus_europaeus
WBGene00017830	rpb-8	100	62.667	ENSELUG00000006347	polr2h	100	62.667	Esox_lucius
WBGene00017830	rpb-8	100	63.333	ENSFCAG00000007797	POLR2H	100	63.333	Felis_catus
WBGene00017830	rpb-8	100	63.333	ENSFALG00000008177	POLR2H	100	63.333	Ficedula_albicollis
WBGene00017830	rpb-8	100	63.333	ENSFDAG00000008781	POLR2H	100	63.333	Fukomys_damarensis
WBGene00017830	rpb-8	100	63.333	ENSFHEG00000017819	polr2h	100	63.333	Fundulus_heteroclitus
WBGene00017830	rpb-8	100	63.333	ENSGALG00000008534	POLR2H	100	63.333	Gallus_gallus
WBGene00017830	rpb-8	100	63.333	ENSGAFG00000015424	polr2h	100	63.333	Gambusia_affinis
WBGene00017830	rpb-8	100	63.333	ENSGACG00000009019	polr2h	100	63.333	Gasterosteus_aculeatus
WBGene00017830	rpb-8	100	63.333	ENSGAGG00000009016	POLR2H	100	63.333	Gopherus_agassizii
WBGene00017830	rpb-8	83	61.600	ENSGGOG00000002912	-	100	61.600	Gorilla_gorilla
WBGene00017830	rpb-8	100	62.667	ENSHBUG00000006685	polr2h	100	62.667	Haplochromis_burtoni
WBGene00017830	rpb-8	100	63.333	ENSHGLG00000012488	POLR2H	100	63.333	Heterocephalus_glaber_female
WBGene00017830	rpb-8	100	63.333	ENSHGLG00100009576	POLR2H	100	63.333	Heterocephalus_glaber_male
WBGene00017830	rpb-8	100	62.667	ENSHCOG00000010315	polr2h	100	62.667	Hippocampus_comes
WBGene00017830	rpb-8	100	62.667	ENSHCOG00000010338	polr2h	100	62.667	Hippocampus_comes
WBGene00017830	rpb-8	100	62.000	ENSIPUG00000024331	polr2h	100	62.000	Ictalurus_punctatus
WBGene00017830	rpb-8	100	63.333	ENSSTOG00000008300	POLR2H	100	63.333	Ictidomys_tridecemlineatus
WBGene00017830	rpb-8	100	63.333	ENSJJAG00000015574	Polr2h	100	63.333	Jaculus_jaculus
WBGene00017830	rpb-8	100	63.333	ENSKMAG00000008353	polr2h	100	63.333	Kryptolebias_marmoratus
WBGene00017830	rpb-8	100	62.667	ENSLBEG00000018905	polr2h	100	62.667	Labrus_bergylta
WBGene00017830	rpb-8	100	63.333	ENSLACG00000015017	POLR2H	100	63.333	Latimeria_chalumnae
WBGene00017830	rpb-8	73	59.633	ENSLOCG00000008946	polr2h	97	59.633	Lepisosteus_oculatus
WBGene00017830	rpb-8	100	63.333	ENSLAFG00000003573	POLR2H	100	63.333	Loxodonta_africana
WBGene00017830	rpb-8	100	63.333	ENSMFAG00000038115	POLR2H	100	63.333	Macaca_fascicularis
WBGene00017830	rpb-8	100	63.333	ENSMMUG00000007524	POLR2H	100	63.333	Macaca_mulatta
WBGene00017830	rpb-8	100	63.333	ENSMNEG00000037272	POLR2H	100	63.333	Macaca_nemestrina
WBGene00017830	rpb-8	100	63.333	ENSMLEG00000039827	POLR2H	100	63.333	Mandrillus_leucophaeus
WBGene00017830	rpb-8	100	62.667	ENSMAMG00000001923	polr2h	100	62.667	Mastacembelus_armatus
WBGene00017830	rpb-8	100	62.667	ENSMZEG00005017494	polr2h	100	62.667	Maylandia_zebra
WBGene00017830	rpb-8	100	63.333	ENSMAUG00000016338	Polr2h	100	63.333	Mesocricetus_auratus
WBGene00017830	rpb-8	100	63.333	ENSMICG00000048991	-	100	63.333	Microcebus_murinus
WBGene00017830	rpb-8	96	62.500	ENSMICG00000027485	-	94	62.500	Microcebus_murinus
WBGene00017830	rpb-8	100	47.651	ENSMICG00000033578	-	100	47.651	Microcebus_murinus
WBGene00017830	rpb-8	100	63.333	ENSMOCG00000004886	Polr2h	100	63.333	Microtus_ochrogaster
WBGene00017830	rpb-8	100	62.667	ENSMMOG00000008575	polr2h	100	62.667	Mola_mola
WBGene00017830	rpb-8	100	63.333	ENSMODG00000002570	POLR2H	100	63.333	Monodelphis_domestica
WBGene00017830	rpb-8	100	62.667	ENSMALG00000015108	polr2h	100	62.667	Monopterus_albus
WBGene00017830	rpb-8	100	63.333	MGP_CAROLIEiJ_G0020589	Polr2h	100	63.333	Mus_caroli
WBGene00017830	rpb-8	100	63.333	ENSMUSG00000021018	Polr2h	100	63.333	Mus_musculus
WBGene00017830	rpb-8	100	63.333	MGP_SPRETEiJ_G0021486	Polr2h	100	63.333	Mus_spretus
WBGene00017830	rpb-8	100	63.333	ENSMPUG00000002852	POLR2H	100	63.333	Mustela_putorius_furo
WBGene00017830	rpb-8	100	63.333	ENSMLUG00000022295	POLR2H	100	63.333	Myotis_lucifugus
WBGene00017830	rpb-8	100	63.333	ENSNGAG00000023997	-	100	63.333	Nannospalax_galili
WBGene00017830	rpb-8	100	47.651	ENSNGAG00000015806	-	100	47.651	Nannospalax_galili
WBGene00017830	rpb-8	100	62.667	ENSNBRG00000001133	polr2h	100	62.667	Neolamprologus_brichardi
WBGene00017830	rpb-8	100	63.333	ENSNLEG00000029447	POLR2H	100	63.333	Nomascus_leucogenys
WBGene00017830	rpb-8	59	62.222	ENSMEUG00000014141	-	100	62.222	Notamacropus_eugenii
WBGene00017830	rpb-8	55	62.195	ENSOPRG00000015024	-	99	62.195	Ochotona_princeps
WBGene00017830	rpb-8	100	62.667	ENSODEG00000020005	-	100	62.667	Octodon_degus
WBGene00017830	rpb-8	100	62.667	ENSODEG00000013008	-	100	62.667	Octodon_degus
WBGene00017830	rpb-8	100	62.667	ENSONIG00000012493	polr2h	100	62.667	Oreochromis_niloticus
WBGene00017830	rpb-8	100	63.333	ENSOANG00000010454	POLR2H	100	63.333	Ornithorhynchus_anatinus
WBGene00017830	rpb-8	100	63.333	ENSOCUG00000007078	POLR2H	100	63.333	Oryctolagus_cuniculus
WBGene00017830	rpb-8	100	62.667	ENSORLG00000023347	polr2h	100	62.667	Oryzias_latipes
WBGene00017830	rpb-8	100	62.667	ENSORLG00020017770	polr2h	100	62.667	Oryzias_latipes_hni
WBGene00017830	rpb-8	100	62.667	ENSORLG00015013505	polr2h	100	62.667	Oryzias_latipes_hsok
WBGene00017830	rpb-8	100	62.667	ENSOMEG00000021100	polr2h	100	62.667	Oryzias_melastigma
WBGene00017830	rpb-8	100	63.333	ENSOGAG00000001599	POLR2H	100	63.333	Otolemur_garnettii
WBGene00017830	rpb-8	100	63.333	ENSOARG00000020584	POLR2H	100	63.333	Ovis_aries
WBGene00017830	rpb-8	100	63.333	ENSPPAG00000035658	-	100	63.333	Pan_paniscus
WBGene00017830	rpb-8	100	63.333	ENSPPRG00000004001	POLR2H	100	63.333	Panthera_pardus
WBGene00017830	rpb-8	100	63.333	ENSPTIG00000010551	POLR2H	100	63.333	Panthera_tigris_altaica
WBGene00017830	rpb-8	100	63.333	ENSPTRG00000047600	-	100	52.703	Pan_troglodytes
WBGene00017830	rpb-8	100	63.333	ENSPANG00000020585	POLR2H	100	63.333	Papio_anubis
WBGene00017830	rpb-8	100	62.667	ENSPKIG00000022836	polr2h	100	62.667	Paramormyrops_kingsleyae
WBGene00017830	rpb-8	76	61.404	ENSPSIG00000017108	POLR2H	100	61.404	Pelodiscus_sinensis
WBGene00017830	rpb-8	100	63.333	ENSPMGG00000004693	polr2h	94	63.333	Periophthalmus_magnuspinnatus
WBGene00017830	rpb-8	100	64.000	ENSPMAG00000008230	-	100	64.000	Petromyzon_marinus
WBGene00017830	rpb-8	100	63.333	ENSPFOG00000024200	polr2h	100	63.333	Poecilia_formosa
WBGene00017830	rpb-8	100	63.333	ENSPLAG00000024033	polr2h	100	63.333	Poecilia_latipinna
WBGene00017830	rpb-8	100	63.333	ENSPMEG00000005909	polr2h	100	63.333	Poecilia_mexicana
WBGene00017830	rpb-8	100	63.333	ENSPREG00000007275	polr2h	100	63.333	Poecilia_reticulata
WBGene00017830	rpb-8	100	63.333	ENSPPYG00000014357	-	100	63.333	Pongo_abelii
WBGene00017830	rpb-8	100	45.333	ENSPCAG00000015035	-	100	45.333	Procavia_capensis
WBGene00017830	rpb-8	100	63.333	ENSPCOG00000021194	POLR2H	100	63.333	Propithecus_coquereli
WBGene00017830	rpb-8	100	54.667	ENSPVAG00000004869	POLR2H	100	54.667	Pteropus_vampyrus
WBGene00017830	rpb-8	100	62.667	ENSPNYG00000020592	polr2h	100	62.667	Pundamilia_nyererei
WBGene00017830	rpb-8	100	62.000	ENSPNAG00000010676	polr2h	100	62.000	Pygocentrus_nattereri
WBGene00017830	rpb-8	100	63.333	ENSRNOG00000049116	Polr2h	100	63.333	Rattus_norvegicus
WBGene00017830	rpb-8	100	63.333	ENSRNOG00000001748	LOC100912534	100	63.333	Rattus_norvegicus
WBGene00017830	rpb-8	100	63.333	ENSRBIG00000032148	POLR2H	100	63.333	Rhinopithecus_bieti
WBGene00017830	rpb-8	100	63.333	ENSRROG00000040465	POLR2H	100	63.333	Rhinopithecus_roxellana
WBGene00017830	rpb-8	98	32.026	YOR224C	RPB8	100	32.026	Saccharomyces_cerevisiae
WBGene00017830	rpb-8	100	63.333	ENSSBOG00000033101	POLR2H	100	52.703	Saimiri_boliviensis_boliviensis
WBGene00017830	rpb-8	84	61.905	ENSSHAG00000006304	POLR2H	91	61.905	Sarcophilus_harrisii
WBGene00017830	rpb-8	100	62.667	ENSSFOG00015014221	polr2h	100	62.667	Scleropages_formosus
WBGene00017830	rpb-8	100	62.667	ENSSMAG00000001049	polr2h	100	62.667	Scophthalmus_maximus
WBGene00017830	rpb-8	100	62.667	ENSSDUG00000005936	polr2h	100	62.667	Seriola_dumerili
WBGene00017830	rpb-8	100	62.667	ENSSLDG00000002246	polr2h	100	62.667	Seriola_lalandi_dorsalis
WBGene00017830	rpb-8	100	63.333	ENSSARG00000003429	POLR2H	100	63.333	Sorex_araneus
WBGene00017830	rpb-8	76	61.404	ENSSPUG00000014013	-	100	61.404	Sphenodon_punctatus
WBGene00017830	rpb-8	100	62.667	ENSSPAG00000012297	polr2h	100	62.667	Stegastes_partitus
WBGene00017830	rpb-8	100	63.333	ENSSSCG00000022507	POLR2H	100	63.333	Sus_scrofa
WBGene00017830	rpb-8	95	62.676	ENSTGUG00000010383	POLR2H	99	62.676	Taeniopygia_guttata
WBGene00017830	rpb-8	100	62.667	ENSTRUG00000007619	polr2h	100	62.667	Takifugu_rubripes
WBGene00017830	rpb-8	100	62.667	ENSTNIG00000012183	polr2h	100	62.667	Tetraodon_nigroviridis
WBGene00017830	rpb-8	59	71.053	ENSTBEG00000005571	-	58	71.053	Tupaia_belangeri
WBGene00017830	rpb-8	100	63.333	ENSTTRG00000011254	POLR2H	100	63.333	Tursiops_truncatus
WBGene00017830	rpb-8	100	63.333	ENSUAMG00000004615	POLR2H	100	63.333	Ursus_americanus
WBGene00017830	rpb-8	100	63.333	ENSUMAG00000005255	POLR2H	100	63.333	Ursus_maritimus
WBGene00017830	rpb-8	100	52.000	ENSVPAG00000009011	-	100	52.000	Vicugna_pacos
WBGene00017830	rpb-8	100	63.333	ENSVVUG00000012241	POLR2H	100	63.333	Vulpes_vulpes
WBGene00017830	rpb-8	100	61.333	ENSXETG00000017291	polr2h	100	61.333	Xenopus_tropicalis
WBGene00017830	rpb-8	100	63.333	ENSXCOG00000003501	polr2h	100	63.333	Xiphophorus_couchianus
WBGene00017830	rpb-8	100	63.333	ENSXMAG00000005861	polr2h	100	63.333	Xiphophorus_maculatus