EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00018156 (Gene tree)
Gene ID: -
Gene Symbol: ncbp-1
Alias: cbp-80
Full Name: Nuclear cap-binding protein subunit 1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3817 bases
Position: chrI:6421978-6425794
Accession: O01763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F37E3	MIF4G_like	PF09088.11	4.4e-25	1	1
F37E3	MIF4G_like_2	PF09090.11	4.5e-52	1	1
F37E3	MIF4G	PF02854.19	2.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F37E3.1	-	2766	NM_059449	F37E3.1	798 (aa)	NP_491850	O01763

Gene Model

Click here to download WBGene00018156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00018156's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00018156	ncbp-1	99	34.279	ENSG00000136937	NCBP1	99	34.772	Homo_sapiens
WBGene00018156	ncbp-1	100	36.946	ENSAPOG00000008002	NCBP1	100	36.946	Acanthochromis_polyacanthus
WBGene00018156	ncbp-1	99	34.317	ENSAMEG00000004763	NCBP1	99	34.809	Ailuropoda_melanoleuca
WBGene00018156	ncbp-1	100	36.285	ENSACIG00000000274	NCBP1	100	36.285	Amphilophus_citrinellus
WBGene00018156	ncbp-1	100	37.023	ENSAOCG00000021148	NCBP1	100	37.023	Amphiprion_ocellaris
WBGene00018156	ncbp-1	100	37.023	ENSAPEG00000001701	NCBP1	100	37.023	Amphiprion_percula
WBGene00018156	ncbp-1	100	36.900	ENSATEG00000006929	NCBP1	100	36.900	Anabas_testudineus
WBGene00018156	ncbp-1	95	33.892	ENSAPLG00000016318	NCBP1	99	34.278	Anas_platyrhynchos
WBGene00018156	ncbp-1	99	34.550	ENSACAG00000004409	NCBP1	87	34.428	Anolis_carolinensis
WBGene00018156	ncbp-1	99	33.785	ENSANAG00000025744	NCBP1	99	34.548	Aotus_nancymaae
WBGene00018156	ncbp-1	100	36.777	ENSACLG00000014812	NCBP1	100	36.777	Astatotilapia_calliptera
WBGene00018156	ncbp-1	100	35.049	ENSAMXG00000016364	NCBP1	100	35.172	Astyanax_mexicanus
WBGene00018156	ncbp-1	99	34.279	ENSBTAG00000009732	NCBP1	99	41.916	Bos_taurus
WBGene00018156	ncbp-1	99	34.279	ENSCJAG00000010840	NCBP1	99	40.336	Callithrix_jacchus
WBGene00018156	ncbp-1	99	34.279	ENSCAFG00000002445	NCBP1	99	34.772	Canis_familiaris
WBGene00018156	ncbp-1	98	33.960	ENSCAFG00020017997	NCBP1	95	40.447	Canis_lupus_dingo
WBGene00018156	ncbp-1	99	34.279	ENSCHIG00000020139	NCBP1	99	34.772	Capra_hircus
WBGene00018156	ncbp-1	50	40.299	ENSTSYG00000011914	NCBP1	98	41.433	Carlito_syrichta
WBGene00018156	ncbp-1	80	32.921	ENSCAPG00000014252	NCBP1	90	33.385	Cavia_aperea
WBGene00018156	ncbp-1	95	33.721	ENSCPOG00000012573	NCBP1	98	34.238	Cavia_porcellus
WBGene00018156	ncbp-1	99	34.279	ENSCCAG00000032297	NCBP1	99	34.772	Cebus_capucinus
WBGene00018156	ncbp-1	99	34.279	ENSCATG00000010052	NCBP1	99	34.772	Cercocebus_atys
WBGene00018156	ncbp-1	99	34.279	ENSCLAG00000014339	NCBP1	99	34.772	Chinchilla_lanigera
WBGene00018156	ncbp-1	99	34.279	ENSCSAG00000010929	NCBP1	99	34.772	Chlorocebus_sabaeus
WBGene00018156	ncbp-1	75	33.224	ENSCHOG00000010332	NCBP1	76	33.224	Choloepus_hoffmanni
WBGene00018156	ncbp-1	99	34.457	ENSCPBG00000024344	NCBP1	99	34.539	Chrysemys_picta_bellii
WBGene00018156	ncbp-1	99	33.087	ENSCING00000008990	-	99	33.087	Ciona_intestinalis
WBGene00018156	ncbp-1	99	31.481	ENSCSAVG00000005300	-	97	31.481	Ciona_savignyi
WBGene00018156	ncbp-1	99	34.279	ENSCANG00000036913	NCBP1	99	34.772	Colobus_angolensis_palliatus
WBGene00018156	ncbp-1	99	34.772	ENSCGRG00001015771	Ncbp1	99	34.895	Cricetulus_griseus_chok1gshd
WBGene00018156	ncbp-1	99	34.582	ENSCGRG00000010311	Ncbp1	99	34.712	Cricetulus_griseus_crigri
WBGene00018156	ncbp-1	100	36.654	ENSCSEG00000012377	NCBP1	100	36.654	Cynoglossus_semilaevis
WBGene00018156	ncbp-1	100	35.417	ENSCVAG00000008795	NCBP1	100	35.670	Cyprinodon_variegatus
WBGene00018156	ncbp-1	99	34.155	ENSDNOG00000006885	NCBP1	99	34.649	Dasypus_novemcinctus
WBGene00018156	ncbp-1	99	33.130	ENSDORG00000013652	Ncbp1	99	33.619	Dipodomys_ordii
WBGene00018156	ncbp-1	99	34.815	FBgn0022942	Cbp80	99	34.815	Drosophila_melanogaster
WBGene00018156	ncbp-1	89	35.223	ENSETEG00000009705	NCBP1	89	35.223	Echinops_telfairi
WBGene00018156	ncbp-1	99	35.741	ENSEBUG00000008386	NCBP1	99	35.741	Eptatretus_burgeri
WBGene00018156	ncbp-1	99	34.155	ENSEASG00005022795	NCBP1	99	34.649	Equus_asinus_asinus
WBGene00018156	ncbp-1	99	34.155	ENSECAG00000013847	NCBP1	99	34.649	Equus_caballus
WBGene00018156	ncbp-1	92	33.780	ENSEEUG00000015973	NCBP1	97	34.140	Erinaceus_europaeus
WBGene00018156	ncbp-1	100	36.874	ENSELUG00000022519	NCBP1	100	37.363	Esox_lucius
WBGene00018156	ncbp-1	99	34.155	ENSFCAG00000001206	NCBP1	99	34.649	Felis_catus
WBGene00018156	ncbp-1	98	34.082	ENSFALG00000001193	NCBP1	99	33.915	Ficedula_albicollis
WBGene00018156	ncbp-1	99	34.279	ENSFDAG00000010864	NCBP1	99	34.772	Fukomys_damarensis
WBGene00018156	ncbp-1	100	36.039	ENSFHEG00000000655	NCBP1	100	36.039	Fundulus_heteroclitus
WBGene00018156	ncbp-1	100	36.275	ENSGMOG00000008653	NCBP1	99	36.275	Gadus_morhua
WBGene00018156	ncbp-1	98	34.171	ENSGALG00000002087	NCBP1	99	34.563	Gallus_gallus
WBGene00018156	ncbp-1	100	35.793	ENSGAFG00000017787	NCBP1	100	35.916	Gambusia_affinis
WBGene00018156	ncbp-1	100	35.504	ENSGACG00000016772	NCBP1	99	35.504	Gasterosteus_aculeatus
WBGene00018156	ncbp-1	98	34.045	ENSGAGG00000019483	NCBP1	99	34.367	Gopherus_agassizii
WBGene00018156	ncbp-1	99	34.279	ENSGGOG00000001376	NCBP1	99	34.772	Gorilla_gorilla
WBGene00018156	ncbp-1	100	36.777	ENSHBUG00000020843	NCBP1	100	36.777	Haplochromis_burtoni
WBGene00018156	ncbp-1	99	30.284	ENSHGLG00000018112	-	99	30.532	Heterocephalus_glaber_female
WBGene00018156	ncbp-1	99	34.279	ENSHGLG00000001882	NCBP1	99	34.772	Heterocephalus_glaber_female
WBGene00018156	ncbp-1	99	34.279	ENSHGLG00100013014	NCBP1	99	34.772	Heterocephalus_glaber_male
WBGene00018156	ncbp-1	99	30.037	ENSHGLG00100017373	-	99	30.284	Heterocephalus_glaber_male
WBGene00018156	ncbp-1	74	31.097	ENSHCOG00000000204	NCBP1	87	31.588	Hippocampus_comes
WBGene00018156	ncbp-1	100	35.618	ENSIPUG00000007275	ncbp1	100	35.985	Ictalurus_punctatus
WBGene00018156	ncbp-1	99	34.279	ENSSTOG00000002695	NCBP1	99	34.772	Ictidomys_tridecemlineatus
WBGene00018156	ncbp-1	100	36.039	ENSKMAG00000003594	NCBP1	97	42.680	Kryptolebias_marmoratus
WBGene00018156	ncbp-1	100	36.165	ENSLBEG00000011661	NCBP1	100	36.165	Labrus_bergylta
WBGene00018156	ncbp-1	99	33.701	ENSLACG00000013955	NCBP1	98	34.701	Latimeria_chalumnae
WBGene00018156	ncbp-1	99	31.018	ENSLOCG00000009579	NCBP1	99	31.018	Lepisosteus_oculatus
WBGene00018156	ncbp-1	99	34.155	ENSLAFG00000005999	NCBP1	99	34.649	Loxodonta_africana
WBGene00018156	ncbp-1	99	34.279	ENSMFAG00000030994	NCBP1	99	34.772	Macaca_fascicularis
WBGene00018156	ncbp-1	98	33.960	ENSMMUG00000012281	NCBP1	99	34.302	Macaca_mulatta
WBGene00018156	ncbp-1	99	34.279	ENSMNEG00000042790	NCBP1	99	34.772	Macaca_nemestrina
WBGene00018156	ncbp-1	99	34.279	ENSMLEG00000030374	NCBP1	99	34.772	Mandrillus_leucophaeus
WBGene00018156	ncbp-1	100	36.285	ENSMAMG00000014806	NCBP1	100	36.285	Mastacembelus_armatus
WBGene00018156	ncbp-1	100	36.777	ENSMZEG00005003469	NCBP1	100	36.777	Maylandia_zebra
WBGene00018156	ncbp-1	97	36.224	ENSMZEG00005009290	-	99	36.224	Maylandia_zebra
WBGene00018156	ncbp-1	99	33.621	ENSMAUG00000020583	Ncbp1	99	33.744	Mesocricetus_auratus
WBGene00018156	ncbp-1	99	34.279	ENSMICG00000012682	NCBP1	99	34.772	Microcebus_murinus
WBGene00018156	ncbp-1	99	34.772	ENSMOCG00000015818	Ncbp1	99	34.895	Microtus_ochrogaster
WBGene00018156	ncbp-1	91	34.735	ENSMMOG00000002610	NCBP1	99	34.735	Mola_mola
WBGene00018156	ncbp-1	99	34.449	ENSMODG00000003202	NCBP1	99	34.820	Monodelphis_domestica
WBGene00018156	ncbp-1	100	36.654	ENSMALG00000003547	NCBP1	100	36.654	Monopterus_albus
WBGene00018156	ncbp-1	99	34.402	MGP_CAROLIEiJ_G0025982	Ncbp1	99	34.525	Mus_caroli
WBGene00018156	ncbp-1	99	34.402	ENSMUSG00000028330	Ncbp1	99	34.525	Mus_musculus
WBGene00018156	ncbp-1	99	34.279	MGP_PahariEiJ_G0028318	Ncbp1	99	34.402	Mus_pahari
WBGene00018156	ncbp-1	99	34.402	MGP_SPRETEiJ_G0026945	Ncbp1	99	34.525	Mus_spretus
WBGene00018156	ncbp-1	99	34.402	ENSMPUG00000006399	NCBP1	99	34.525	Mustela_putorius_furo
WBGene00018156	ncbp-1	98	33.459	ENSMLUG00000015201	NCBP1	99	34.005	Myotis_lucifugus
WBGene00018156	ncbp-1	99	34.321	ENSNGAG00000014101	Ncbp1	99	34.691	Nannospalax_galili
WBGene00018156	ncbp-1	68	45.872	ENSNBRG00000014674	NCBP1	97	40.511	Neolamprologus_brichardi
WBGene00018156	ncbp-1	99	34.279	ENSNLEG00000016909	NCBP1	99	34.772	Nomascus_leucogenys
WBGene00018156	ncbp-1	90	38.877	ENSMEUG00000010672	NCBP1	90	38.877	Notamacropus_eugenii
WBGene00018156	ncbp-1	71	31.732	ENSOPRG00000002144	-	76	32.419	Ochotona_princeps
WBGene00018156	ncbp-1	99	34.279	ENSODEG00000003232	NCBP1	99	34.772	Octodon_degus
WBGene00018156	ncbp-1	100	36.900	ENSONIG00000001502	NCBP1	100	36.900	Oreochromis_niloticus
WBGene00018156	ncbp-1	77	38.141	ENSOANG00000001918	NCBP1	99	38.622	Ornithorhynchus_anatinus
WBGene00018156	ncbp-1	99	34.286	ENSOCUG00000013853	NCBP1	98	34.907	Oryctolagus_cuniculus
WBGene00018156	ncbp-1	100	36.319	ENSORLG00000011008	NCBP1	100	36.319	Oryzias_latipes
WBGene00018156	ncbp-1	100	36.196	ENSORLG00020017455	NCBP1	100	36.196	Oryzias_latipes_hni
WBGene00018156	ncbp-1	100	36.319	ENSORLG00015012127	NCBP1	100	36.319	Oryzias_latipes_hsok
WBGene00018156	ncbp-1	100	36.196	ENSOMEG00000020698	NCBP1	100	36.196	Oryzias_melastigma
WBGene00018156	ncbp-1	99	34.317	ENSOGAG00000013888	NCBP1	99	34.809	Otolemur_garnettii
WBGene00018156	ncbp-1	99	34.279	ENSOARG00000011233	NCBP1	99	34.772	Ovis_aries
WBGene00018156	ncbp-1	99	34.279	ENSPPAG00000026462	NCBP1	99	34.772	Pan_paniscus
WBGene00018156	ncbp-1	99	34.279	ENSPPRG00000022574	NCBP1	99	34.772	Panthera_pardus
WBGene00018156	ncbp-1	99	34.279	ENSPTIG00000018507	NCBP1	99	34.772	Panthera_tigris_altaica
WBGene00018156	ncbp-1	99	34.279	ENSPTRG00000021167	NCBP1	99	34.772	Pan_troglodytes
WBGene00018156	ncbp-1	99	34.279	ENSPANG00000025591	NCBP1	99	34.772	Papio_anubis
WBGene00018156	ncbp-1	99	34.761	ENSPKIG00000015861	NCBP1	99	35.135	Paramormyrops_kingsleyae
WBGene00018156	ncbp-1	100	35.653	ENSPMGG00000020476	NCBP1	100	35.653	Periophthalmus_magnuspinnatus
WBGene00018156	ncbp-1	99	34.279	ENSPEMG00000020105	Ncbp1	99	34.402	Peromyscus_maniculatus_bairdii
WBGene00018156	ncbp-1	99	33.701	ENSPMAG00000005533	NCBP1	99	33.701	Petromyzon_marinus
WBGene00018156	ncbp-1	99	34.325	ENSPCIG00000015800	NCBP1	99	41.176	Phascolarctos_cinereus
WBGene00018156	ncbp-1	100	35.907	ENSPFOG00000004158	NCBP1	100	35.330	Poecilia_formosa
WBGene00018156	ncbp-1	100	35.793	ENSPLAG00000020002	NCBP1	100	35.916	Poecilia_latipinna
WBGene00018156	ncbp-1	100	35.547	ENSPMEG00000019821	NCBP1	100	35.670	Poecilia_mexicana
WBGene00018156	ncbp-1	100	36.039	ENSPREG00000006035	NCBP1	100	35.985	Poecilia_reticulata
WBGene00018156	ncbp-1	99	34.279	ENSPPYG00000019426	NCBP1	99	34.772	Pongo_abelii
WBGene00018156	ncbp-1	89	38.623	ENSPCAG00000009943	NCBP1	89	38.623	Procavia_capensis
WBGene00018156	ncbp-1	82	42.331	ENSPCOG00000020024	NCBP1	98	42.331	Propithecus_coquereli
WBGene00018156	ncbp-1	99	34.032	ENSPVAG00000005924	NCBP1	99	34.525	Pteropus_vampyrus
WBGene00018156	ncbp-1	91	35.957	ENSPNYG00000002140	NCBP1	99	35.957	Pundamilia_nyererei
WBGene00018156	ncbp-1	100	36.054	ENSPNAG00000027753	NCBP1	100	36.419	Pygocentrus_nattereri
WBGene00018156	ncbp-1	99	34.279	ENSRNOG00000023605	Ncbp1	99	34.402	Rattus_norvegicus
WBGene00018156	ncbp-1	99	34.279	ENSRBIG00000043175	NCBP1	99	34.772	Rhinopithecus_bieti
WBGene00018156	ncbp-1	99	34.279	ENSRROG00000029767	NCBP1	99	34.772	Rhinopithecus_roxellana
WBGene00018156	ncbp-1	99	34.279	ENSSBOG00000019378	NCBP1	97	40.291	Saimiri_boliviensis_boliviensis
WBGene00018156	ncbp-1	68	39.655	ENSSHAG00000015882	NCBP1	72	39.655	Sarcophilus_harrisii
WBGene00018156	ncbp-1	98	35.338	ENSSFOG00015001872	NCBP1	99	35.468	Scleropages_formosus
WBGene00018156	ncbp-1	100	36.654	ENSSMAG00000007463	NCBP1	100	36.654	Scophthalmus_maximus
WBGene00018156	ncbp-1	100	36.531	ENSSDUG00000007019	NCBP1	99	38.304	Seriola_dumerili
WBGene00018156	ncbp-1	100	36.408	ENSSLDG00000021924	NCBP1	100	36.408	Seriola_lalandi_dorsalis
WBGene00018156	ncbp-1	76	30.882	ENSSARG00000007274	NCBP1	78	30.882	Sorex_araneus
WBGene00018156	ncbp-1	99	30.826	ENSSPUG00000008609	NCBP1	99	31.196	Sphenodon_punctatus
WBGene00018156	ncbp-1	100	36.654	ENSSPAG00000012550	NCBP1	100	36.654	Stegastes_partitus
WBGene00018156	ncbp-1	99	34.155	ENSSSCG00000005366	NCBP1	99	34.649	Sus_scrofa
WBGene00018156	ncbp-1	99	32.472	ENSTGUG00000001472	NCBP1	99	32.555	Taeniopygia_guttata
WBGene00018156	ncbp-1	100	36.900	ENSTRUG00000005287	NCBP1	100	37.023	Takifugu_rubripes
WBGene00018156	ncbp-1	99	34.032	ENSTBEG00000004035	NCBP1	99	34.525	Tupaia_belangeri
WBGene00018156	ncbp-1	87	41.379	ENSTTRG00000000507	NCBP1	87	41.379	Tursiops_truncatus
WBGene00018156	ncbp-1	99	34.402	ENSUAMG00000005471	NCBP1	99	34.895	Ursus_americanus
WBGene00018156	ncbp-1	97	32.484	ENSUMAG00000011865	NCBP1	99	33.716	Ursus_maritimus
WBGene00018156	ncbp-1	99	33.046	ENSVPAG00000010537	NCBP1	99	33.539	Vicugna_pacos
WBGene00018156	ncbp-1	99	34.279	ENSVVUG00000019725	NCBP1	99	34.772	Vulpes_vulpes
WBGene00018156	ncbp-1	99	35.000	ENSXETG00000010179	ncbp1	99	35.366	Xenopus_tropicalis
WBGene00018156	ncbp-1	100	35.793	ENSXMAG00000018253	NCBP1	100	35.916	Xiphophorus_maculatus