EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00018391 (Gene tree)
Gene ID: -
Gene Symbol: rpb-4
Alias: -
Full Name: RNA Polymerase II (B) subunit
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 737 bases
Position: chrII:7374501-7375237
Accession: O02092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F43E2	RNA_pol_Rpb4	PF03874.16	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F43E2.2	-	602	NM_063143	F43E2.2	144 (aa)	NP_495544	O02092

Gene Model

Click here to download WBGene00018391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00018391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00018391	rpb-4	100	57.639	ENSG00000144231	POLR2D	99	61.165	Homo_sapiens
WBGene00018391	rpb-4	100	57.931	ENSAPOG00000023553	polr2d	99	57.931	Acanthochromis_polyacanthus
WBGene00018391	rpb-4	100	56.944	ENSAMEG00000011746	POLR2D	99	56.944	Ailuropoda_melanoleuca
WBGene00018391	rpb-4	100	57.931	ENSAOCG00000007295	polr2d	99	57.931	Amphiprion_ocellaris
WBGene00018391	rpb-4	100	57.931	ENSAPEG00000018714	polr2d	99	57.931	Amphiprion_percula
WBGene00018391	rpb-4	100	58.621	ENSATEG00000020416	polr2d	99	58.621	Anabas_testudineus
WBGene00018391	rpb-4	100	57.639	ENSACAG00000005255	POLR2D	99	57.639	Anolis_carolinensis
WBGene00018391	rpb-4	100	57.639	ENSANAG00000019959	POLR2D	99	57.639	Aotus_nancymaae
WBGene00018391	rpb-4	100	57.931	ENSACLG00000009919	polr2d	99	43.448	Astatotilapia_calliptera
WBGene00018391	rpb-4	92	60.150	ENSAMXG00000008954	polr2d	99	58.333	Astyanax_mexicanus
WBGene00018391	rpb-4	100	58.333	ENSBTAG00000053244	POLR2D	99	58.333	Bos_taurus
WBGene00018391	rpb-4	100	57.639	ENSCJAG00000021814	-	99	57.639	Callithrix_jacchus
WBGene00018391	rpb-4	100	57.639	ENSCJAG00000042216	-	99	57.639	Callithrix_jacchus
WBGene00018391	rpb-4	100	57.639	ENSCAFG00000004311	POLR2D	99	57.639	Canis_familiaris
WBGene00018391	rpb-4	100	57.639	ENSCAFG00020003617	POLR2D	99	57.639	Canis_lupus_dingo
WBGene00018391	rpb-4	99	58.451	ENSCHIG00000025995	POLR2D	99	58.451	Capra_hircus
WBGene00018391	rpb-4	79	58.772	ENSTSYG00000036021	POLR2D	97	58.772	Carlito_syrichta
WBGene00018391	rpb-4	100	57.639	ENSCPOG00000002571	POLR2D	99	57.639	Cavia_porcellus
WBGene00018391	rpb-4	100	57.639	ENSCCAG00000037709	POLR2D	99	57.639	Cebus_capucinus
WBGene00018391	rpb-4	100	58.333	ENSCATG00000036749	POLR2D	99	58.333	Cercocebus_atys
WBGene00018391	rpb-4	100	56.944	ENSCLAG00000004449	POLR2D	99	56.944	Chinchilla_lanigera
WBGene00018391	rpb-4	100	58.333	ENSCSAG00000016861	POLR2D	99	58.333	Chlorocebus_sabaeus
WBGene00018391	rpb-4	79	59.649	ENSCHOG00000013850	POLR2D	97	59.649	Choloepus_hoffmanni
WBGene00018391	rpb-4	99	57.746	ENSCPBG00000019132	POLR2D	50	57.746	Chrysemys_picta_bellii
WBGene00018391	rpb-4	90	58.462	ENSCING00000011474	-	96	58.462	Ciona_intestinalis
WBGene00018391	rpb-4	90	56.154	ENSCSAVG00000008353	-	88	56.154	Ciona_savignyi
WBGene00018391	rpb-4	100	57.639	ENSCANG00000043665	POLR2D	99	57.639	Colobus_angolensis_palliatus
WBGene00018391	rpb-4	100	57.639	ENSCGRG00001013608	Polr2d	99	57.639	Cricetulus_griseus_chok1gshd
WBGene00018391	rpb-4	79	59.649	ENSCGRG00000012624	Polr2d	97	59.649	Cricetulus_griseus_crigri
WBGene00018391	rpb-4	100	58.621	ENSCSEG00000006147	polr2d	99	58.621	Cynoglossus_semilaevis
WBGene00018391	rpb-4	100	57.241	ENSCVAG00000000779	polr2d	99	57.241	Cyprinodon_variegatus
WBGene00018391	rpb-4	100	57.639	ENSDARG00000076509	polr2d	99	57.639	Danio_rerio
WBGene00018391	rpb-4	100	57.639	ENSDNOG00000008527	POLR2D	99	57.639	Dasypus_novemcinctus
WBGene00018391	rpb-4	99	58.451	ENSDORG00000026897	Polr2d	99	58.451	Dipodomys_ordii
WBGene00018391	rpb-4	91	51.908	FBgn0263757	Rpb4	93	51.908	Drosophila_melanogaster
WBGene00018391	rpb-4	100	57.639	ENSEBUG00000007675	polr2d	99	57.639	Eptatretus_burgeri
WBGene00018391	rpb-4	100	58.333	ENSEASG00005007103	POLR2D	99	58.333	Equus_asinus_asinus
WBGene00018391	rpb-4	100	57.639	ENSECAG00000000556	POLR2D	99	57.639	Equus_caballus
WBGene00018391	rpb-4	100	59.028	ENSELUG00000005928	polr2d	99	59.028	Esox_lucius
WBGene00018391	rpb-4	100	57.639	ENSFCAG00000027816	POLR2D	99	57.639	Felis_catus
WBGene00018391	rpb-4	100	57.639	ENSFALG00000003528	POLR2D	99	57.639	Ficedula_albicollis
WBGene00018391	rpb-4	100	56.250	ENSFDAG00000007217	POLR2D	99	56.250	Fukomys_damarensis
WBGene00018391	rpb-4	100	59.028	ENSGMOG00000001823	polr2d	99	59.028	Gadus_morhua
WBGene00018391	rpb-4	100	57.639	ENSGALG00000002057	POLR2D	99	57.639	Gallus_gallus
WBGene00018391	rpb-4	100	56.209	ENSGAFG00000016932	polr2d	74	56.209	Gambusia_affinis
WBGene00018391	rpb-4	100	57.241	ENSGACG00000004639	polr2d	99	57.241	Gasterosteus_aculeatus
WBGene00018391	rpb-4	99	57.746	ENSGAGG00000021308	POLR2D	99	57.746	Gopherus_agassizii
WBGene00018391	rpb-4	100	57.639	ENSGGOG00000004723	POLR2D	99	57.639	Gorilla_gorilla
WBGene00018391	rpb-4	100	56.944	ENSHGLG00000016570	Polr2d	99	56.944	Heterocephalus_glaber_female
WBGene00018391	rpb-4	100	56.944	ENSHGLG00100013785	Polr2d	99	56.944	Heterocephalus_glaber_male
WBGene00018391	rpb-4	97	57.857	ENSHCOG00000006425	polr2d	97	57.857	Hippocampus_comes
WBGene00018391	rpb-4	100	56.250	ENSIPUG00000011192	polr2d	99	56.250	Ictalurus_punctatus
WBGene00018391	rpb-4	100	56.250	ENSSTOG00000023329	POLR2D	99	56.250	Ictidomys_tridecemlineatus
WBGene00018391	rpb-4	79	54.386	ENSJJAG00000005723	-	91	54.386	Jaculus_jaculus
WBGene00018391	rpb-4	100	57.639	ENSJJAG00000015053	-	99	57.639	Jaculus_jaculus
WBGene00018391	rpb-4	99	52.113	ENSJJAG00000000783	-	99	52.113	Jaculus_jaculus
WBGene00018391	rpb-4	83	59.664	ENSKMAG00000010677	polr2d	66	59.664	Kryptolebias_marmoratus
WBGene00018391	rpb-4	100	57.639	ENSLACG00000017253	POLR2D	99	57.639	Latimeria_chalumnae
WBGene00018391	rpb-4	100	58.621	ENSLOCG00000009106	polr2d	99	58.621	Lepisosteus_oculatus
WBGene00018391	rpb-4	100	57.639	ENSLAFG00000001848	POLR2D	99	57.639	Loxodonta_africana
WBGene00018391	rpb-4	100	58.333	ENSMFAG00000031937	POLR2D	99	58.333	Macaca_fascicularis
WBGene00018391	rpb-4	100	58.333	ENSMMUG00000001989	POLR2D	99	58.333	Macaca_mulatta
WBGene00018391	rpb-4	100	58.333	ENSMNEG00000035505	POLR2D	99	58.333	Macaca_nemestrina
WBGene00018391	rpb-4	100	58.333	ENSMLEG00000035827	POLR2D	99	58.333	Mandrillus_leucophaeus
WBGene00018391	rpb-4	100	57.639	ENSMGAG00000001248	POLR2D	99	57.639	Meleagris_gallopavo
WBGene00018391	rpb-4	100	56.944	ENSMAUG00000014518	Polr2d	99	56.944	Mesocricetus_auratus
WBGene00018391	rpb-4	100	57.639	ENSMICG00000009931	POLR2D	99	57.639	Microcebus_murinus
WBGene00018391	rpb-4	100	57.639	ENSMOCG00000019367	Polr2d	99	57.639	Microtus_ochrogaster
WBGene00018391	rpb-4	100	58.333	ENSMODG00000018653	-	99	58.333	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.930	ENSMODG00000025026	-	99	54.930	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.930	ENSMODG00000025027	-	99	54.930	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.930	ENSMODG00000025028	-	99	54.930	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.930	ENSMODG00000025031	-	99	54.930	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.930	ENSMODG00000025030	-	99	54.930	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.930	ENSMODG00000025033	-	99	54.930	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.225	ENSMODG00000025032	-	99	54.225	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.225	ENSMODG00000025035	-	99	54.225	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.225	ENSMODG00000025034	-	99	54.225	Monodelphis_domestica
WBGene00018391	rpb-4	99	54.930	ENSMODG00000025036	-	99	54.930	Monodelphis_domestica
WBGene00018391	rpb-4	99	55.634	ENSMODG00000025029	-	99	55.634	Monodelphis_domestica
WBGene00018391	rpb-4	100	58.621	ENSMALG00000018266	polr2d	99	58.621	Monopterus_albus
WBGene00018391	rpb-4	100	57.639	MGP_CAROLIEiJ_G0022066	Polr2d	99	57.639	Mus_caroli
WBGene00018391	rpb-4	100	57.639	ENSMUSG00000024258	Polr2d	99	57.639	Mus_musculus
WBGene00018391	rpb-4	100	57.639	MGP_PahariEiJ_G0018800	Polr2d	99	57.639	Mus_pahari
WBGene00018391	rpb-4	100	57.639	MGP_SPRETEiJ_G0022977	Polr2d	99	57.639	Mus_spretus
WBGene00018391	rpb-4	100	57.639	ENSMPUG00000016685	POLR2D	99	57.639	Mustela_putorius_furo
WBGene00018391	rpb-4	83	59.664	ENSMLUG00000006862	POLR2D	99	59.664	Myotis_lucifugus
WBGene00018391	rpb-4	100	57.639	ENSNGAG00000014862	Polr2d	99	57.639	Nannospalax_galili
WBGene00018391	rpb-4	100	57.639	ENSNLEG00000027191	POLR2D	99	57.639	Nomascus_leucogenys
WBGene00018391	rpb-4	79	58.772	ENSOPRG00000005327	POLR2D	97	58.772	Ochotona_princeps
WBGene00018391	rpb-4	100	56.944	ENSODEG00000005262	POLR2D	99	56.944	Octodon_degus
WBGene00018391	rpb-4	100	58.621	ENSONIG00000017290	polr2d	99	58.621	Oreochromis_niloticus
WBGene00018391	rpb-4	83	60.504	ENSOANG00000013216	POLR2D	99	60.504	Ornithorhynchus_anatinus
WBGene00018391	rpb-4	100	52.414	ENSOCUG00000021449	-	99	52.414	Oryctolagus_cuniculus
WBGene00018391	rpb-4	100	56.250	ENSOCUG00000023403	-	99	56.250	Oryctolagus_cuniculus
WBGene00018391	rpb-4	100	57.931	ENSORLG00000005266	polr2d	99	57.931	Oryzias_latipes
WBGene00018391	rpb-4	100	57.931	ENSORLG00020006647	polr2d	99	57.931	Oryzias_latipes_hni
WBGene00018391	rpb-4	100	57.931	ENSORLG00015003222	polr2d	99	57.931	Oryzias_latipes_hsok
WBGene00018391	rpb-4	99	57.343	ENSOMEG00000018915	polr2d	98	57.343	Oryzias_melastigma
WBGene00018391	rpb-4	100	56.944	ENSOGAG00000017118	POLR2D	99	56.944	Otolemur_garnettii
WBGene00018391	rpb-4	99	58.451	ENSOARG00000015995	POLR2D	99	58.451	Ovis_aries
WBGene00018391	rpb-4	100	57.639	ENSPPRG00000020222	POLR2D	99	57.639	Panthera_pardus
WBGene00018391	rpb-4	100	57.639	ENSPTIG00000018618	POLR2D	99	57.639	Panthera_tigris_altaica
WBGene00018391	rpb-4	100	57.639	ENSPTRG00000012436	POLR2D	99	57.639	Pan_troglodytes
WBGene00018391	rpb-4	100	58.333	ENSPANG00000018602	POLR2D	99	58.333	Papio_anubis
WBGene00018391	rpb-4	99	56.643	ENSPKIG00000012166	polr2d	98	56.643	Paramormyrops_kingsleyae
WBGene00018391	rpb-4	83	60.504	ENSPSIG00000002873	POLR2D	99	60.504	Pelodiscus_sinensis
WBGene00018391	rpb-4	100	57.639	ENSPEMG00000018244	Polr2d	99	57.639	Peromyscus_maniculatus_bairdii
WBGene00018391	rpb-4	100	54.861	ENSPMAG00000005021	polr2d	99	54.861	Petromyzon_marinus
WBGene00018391	rpb-4	100	57.931	ENSPFOG00000008969	polr2d	99	57.931	Poecilia_formosa
WBGene00018391	rpb-4	100	57.931	ENSPLAG00000017210	polr2d	99	57.931	Poecilia_latipinna
WBGene00018391	rpb-4	100	57.931	ENSPMEG00000005160	polr2d	99	57.931	Poecilia_mexicana
WBGene00018391	rpb-4	72	63.107	ENSPREG00000021862	polr2d	99	63.107	Poecilia_reticulata
WBGene00018391	rpb-4	100	57.639	ENSPPYG00000012759	POLR2D	99	57.639	Pongo_abelii
WBGene00018391	rpb-4	100	57.639	ENSPCAG00000001396	POLR2D	99	57.639	Procavia_capensis
WBGene00018391	rpb-4	100	57.639	ENSPCOG00000022076	POLR2D	99	57.639	Propithecus_coquereli
WBGene00018391	rpb-4	100	57.639	ENSPVAG00000004002	POLR2D	99	57.639	Pteropus_vampyrus
WBGene00018391	rpb-4	100	57.639	ENSPNAG00000018246	polr2d	99	57.639	Pygocentrus_nattereri
WBGene00018391	rpb-4	100	57.639	ENSRNOG00000016231	Polr2d	99	57.639	Rattus_norvegicus
WBGene00018391	rpb-4	100	57.639	ENSRBIG00000039326	POLR2D	99	57.639	Rhinopithecus_bieti
WBGene00018391	rpb-4	100	57.639	ENSRROG00000023289	POLR2D	100	58.678	Rhinopithecus_roxellana
WBGene00018391	rpb-4	100	58.333	ENSSHAG00000014817	-	99	58.333	Sarcophilus_harrisii
WBGene00018391	rpb-4	91	60.305	ENSSFOG00015024204	polr2d	98	57.343	Scleropages_formosus
WBGene00018391	rpb-4	100	58.621	ENSSDUG00000006060	polr2d	99	58.621	Seriola_dumerili
WBGene00018391	rpb-4	92	60.902	ENSSLDG00000024485	polr2d	99	58.219	Seriola_lalandi_dorsalis
WBGene00018391	rpb-4	79	59.649	ENSSARG00000009037	POLR2D	97	59.649	Sorex_araneus
WBGene00018391	rpb-4	100	57.639	ENSSPUG00000014915	POLR2D	99	57.639	Sphenodon_punctatus
WBGene00018391	rpb-4	100	58.621	ENSSPAG00000013386	polr2d	99	58.621	Stegastes_partitus
WBGene00018391	rpb-4	100	57.639	ENSSSCG00000039230	POLR2D	99	57.639	Sus_scrofa
WBGene00018391	rpb-4	100	57.639	ENSTGUG00000005773	POLR2D	99	57.639	Taeniopygia_guttata
WBGene00018391	rpb-4	100	58.333	ENSTRUG00000004740	polr2d	99	58.333	Takifugu_rubripes
WBGene00018391	rpb-4	100	58.333	ENSTNIG00000011210	polr2d	99	58.333	Tetraodon_nigroviridis
WBGene00018391	rpb-4	79	59.649	ENSTBEG00000006081	POLR2D	97	59.649	Tupaia_belangeri
WBGene00018391	rpb-4	79	59.649	ENSTTRG00000010055	POLR2D	97	59.649	Tursiops_truncatus
WBGene00018391	rpb-4	91	59.542	ENSUAMG00000024374	POLR2D	98	59.542	Ursus_americanus
WBGene00018391	rpb-4	79	59.649	ENSUMAG00000008280	POLR2D	99	61.165	Ursus_maritimus
WBGene00018391	rpb-4	79	59.649	ENSVPAG00000007239	POLR2D	97	59.649	Vicugna_pacos
WBGene00018391	rpb-4	100	57.639	ENSVVUG00000008616	POLR2D	99	58.824	Vulpes_vulpes
WBGene00018391	rpb-4	99	57.042	ENSXETG00000002955	polr2d	99	57.042	Xenopus_tropicalis
WBGene00018391	rpb-4	72	63.107	ENSXCOG00000012668	polr2d	99	63.107	Xiphophorus_couchianus
WBGene00018391	rpb-4	72	63.107	ENSXMAG00000014031	polr2d	99	63.107	Xiphophorus_maculatus