EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00018793 (Gene tree)
Gene ID: -
Gene Symbol: mrpl-40
Alias: -
Full Name: Mitochondrial Ribosomal Protein%2C Large
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1685 bases
Position: chrIII:87559-89243
Accession: Q9TZ90
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F54C4	MRP-L28	PF09812.9	2.2e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F54C4.1	-	666	NM_064737	F54C4.1	189 (aa)	NP_497138	Q9TZ90

Gene Model

Click here to download WBGene00018793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00018793's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00018793	mrpl-40	82	33.548	ENSAPOG00000021291	mrpl40	73	33.548	Acanthochromis_polyacanthus
WBGene00018793	mrpl-40	81	30.323	ENSAMEG00000011421	MRPL40	72	30.323	Ailuropoda_melanoleuca
WBGene00018793	mrpl-40	61	31.897	ENSACIG00000006717	MRPL40	57	31.897	Amphilophus_citrinellus
WBGene00018793	mrpl-40	62	36.441	ENSACIG00000006672	mrpl40	74	34.839	Amphilophus_citrinellus
WBGene00018793	mrpl-40	62	34.746	ENSAOCG00000003216	mrpl40	73	33.548	Amphiprion_ocellaris
WBGene00018793	mrpl-40	62	34.746	ENSAPEG00000017401	mrpl40	73	33.548	Amphiprion_percula
WBGene00018793	mrpl-40	62	37.288	ENSATEG00000020753	mrpl40	96	33.136	Anabas_testudineus
WBGene00018793	mrpl-40	52	35.354	ENSACAG00000001053	MRPL40	75	30.968	Anolis_carolinensis
WBGene00018793	mrpl-40	72	33.813	ENSANAG00000026579	MRPL40	73	31.875	Aotus_nancymaae
WBGene00018793	mrpl-40	62	36.441	ENSACLG00000011106	mrpl40	73	35.484	Astatotilapia_calliptera
WBGene00018793	mrpl-40	62	40.678	ENSAMXG00000029691	mrpl40	73	36.774	Astyanax_mexicanus
WBGene00018793	mrpl-40	72	33.577	ENSBTAG00000019891	MRPL40	73	32.051	Bos_taurus
WBGene00018793	mrpl-40	72	33.813	ENSCJAG00000001584	MRPL40	73	31.875	Callithrix_jacchus
WBGene00018793	mrpl-40	71	34.074	ENSCAFG00020007995	MRPL40	73	32.051	Canis_lupus_dingo
WBGene00018793	mrpl-40	83	32.051	ENSCHIG00000000131	-	76	32.051	Capra_hircus
WBGene00018793	mrpl-40	72	36.429	ENSCAPG00000012876	MRPL40	95	36.170	Cavia_aperea
WBGene00018793	mrpl-40	71	36.957	ENSCPOG00000026802	MRPL40	72	35.256	Cavia_porcellus
WBGene00018793	mrpl-40	72	33.813	ENSCCAG00000037694	MRPL40	76	31.875	Cebus_capucinus
WBGene00018793	mrpl-40	71	34.074	ENSCLAG00000016629	MRPL40	72	32.468	Chinchilla_lanigera
WBGene00018793	mrpl-40	73	32.609	ENSCSAG00000011593	MRPL40	73	31.210	Chlorocebus_sabaeus
WBGene00018793	mrpl-40	72	33.577	ENSCHOG00000008751	MRPL40	83	32.903	Choloepus_hoffmanni
WBGene00018793	mrpl-40	69	33.588	ENSCSAVG00000001505	-	63	33.588	Ciona_savignyi
WBGene00018793	mrpl-40	73	31.884	ENSCANG00000038600	MRPL40	80	30.573	Colobus_angolensis_palliatus
WBGene00018793	mrpl-40	97	30.769	ENSCGRG00001019957	Mrpl40	85	31.892	Cricetulus_griseus_chok1gshd
WBGene00018793	mrpl-40	97	30.769	ENSCGRG00000001245	Mrpl40	85	31.892	Cricetulus_griseus_crigri
WBGene00018793	mrpl-40	62	33.898	ENSCSEG00000019750	mrpl40	76	33.333	Cynoglossus_semilaevis
WBGene00018793	mrpl-40	62	38.136	ENSCVAG00000018229	mrpl40	73	36.129	Cyprinodon_variegatus
WBGene00018793	mrpl-40	82	36.129	ENSDARG00000043554	mrpl40	75	36.129	Danio_rerio
WBGene00018793	mrpl-40	70	38.235	ENSDORG00000002949	Mrpl40	71	35.256	Dipodomys_ordii
WBGene00018793	mrpl-40	97	36.788	FBgn0037892	mRpL40	87	37.427	Drosophila_melanogaster
WBGene00018793	mrpl-40	52	31.633	ENSETEG00000006816	-	52	31.633	Echinops_telfairi
WBGene00018793	mrpl-40	70	33.835	ENSEASG00005010493	MRPL40	72	31.818	Equus_asinus_asinus
WBGene00018793	mrpl-40	72	33.824	ENSECAG00000009876	MRPL40	90	31.847	Equus_caballus
WBGene00018793	mrpl-40	80	33.766	ENSEEUG00000009268	MRPL40	73	34.375	Erinaceus_europaeus
WBGene00018793	mrpl-40	82	31.646	ENSELUG00000009281	mrpl40	73	33.548	Esox_lucius
WBGene00018793	mrpl-40	70	33.083	ENSFCAG00000002752	MRPL40	72	31.169	Felis_catus
WBGene00018793	mrpl-40	83	30.769	ENSFDAG00000020940	MRPL40	93	30.769	Fukomys_damarensis
WBGene00018793	mrpl-40	50	35.052	ENSGALG00000053063	MRPL40	50	31.013	Gallus_gallus
WBGene00018793	mrpl-40	58	40.541	ENSGAFG00000000522	mrpl40	73	36.538	Gambusia_affinis
WBGene00018793	mrpl-40	62	36.441	ENSHBUG00000000404	mrpl40	74	35.484	Haplochromis_burtoni
WBGene00018793	mrpl-40	83	35.220	ENSHGLG00000018525	MRPL40	93	35.220	Heterocephalus_glaber_female
WBGene00018793	mrpl-40	81	36.943	ENSHGLG00100009563	MRPL40	71	36.943	Heterocephalus_glaber_male
WBGene00018793	mrpl-40	62	36.441	ENSHCOG00000005731	mrpl40	74	34.839	Hippocampus_comes
WBGene00018793	mrpl-40	62	35.593	ENSIPUG00000020288	Mrpl40	71	33.548	Ictalurus_punctatus
WBGene00018793	mrpl-40	70	36.090	ENSSTOG00000002887	MRPL40	73	33.766	Ictidomys_tridecemlineatus
WBGene00018793	mrpl-40	72	35.252	ENSJJAG00000017905	Mrpl40	86	32.432	Jaculus_jaculus
WBGene00018793	mrpl-40	53	38.614	ENSKMAG00000003717	mrpl40	73	33.974	Kryptolebias_marmoratus
WBGene00018793	mrpl-40	99	34.197	ENSLBEG00000025203	mrpl40	89	33.333	Labrus_bergylta
WBGene00018793	mrpl-40	62	35.294	ENSLACG00000015070	MRPL40	80	30.178	Latimeria_chalumnae
WBGene00018793	mrpl-40	61	38.462	ENSLOCG00000001879	mrpl40	79	35.928	Lepisosteus_oculatus
WBGene00018793	mrpl-40	81	33.544	ENSLAFG00000011061	MRPL40	72	33.544	Loxodonta_africana
WBGene00018793	mrpl-40	73	30.435	ENSMNEG00000040492	-	74	30.435	Macaca_nemestrina
WBGene00018793	mrpl-40	62	38.017	ENSMAMG00000014249	mrpl40	73	36.709	Mastacembelus_armatus
WBGene00018793	mrpl-40	62	36.441	ENSMZEG00005009853	mrpl40	73	35.484	Maylandia_zebra
WBGene00018793	mrpl-40	50	36.082	ENSMGAG00000001177	MRPL40	96	31.646	Meleagris_gallopavo
WBGene00018793	mrpl-40	96	30.928	ENSMAUG00000015350	Mrpl40	84	32.065	Mesocricetus_auratus
WBGene00018793	mrpl-40	71	34.783	ENSMOCG00000016970	Mrpl40	84	32.065	Microtus_ochrogaster
WBGene00018793	mrpl-40	62	36.441	ENSMMOG00000012861	mrpl40	81	35.484	Mola_mola
WBGene00018793	mrpl-40	61	34.454	ENSMODG00000010070	MRPL40	83	32.500	Monodelphis_domestica
WBGene00018793	mrpl-40	62	33.898	ENSMALG00000020778	mrpl40	78	33.548	Monopterus_albus
WBGene00018793	mrpl-40	83	34.375	MGP_CAROLIEiJ_G0020557	Mrpl40	93	33.125	Mus_caroli
WBGene00018793	mrpl-40	83	35.000	ENSMUSG00000022706	Mrpl40	93	33.962	Mus_musculus
WBGene00018793	mrpl-40	83	31.410	MGP_PahariEiJ_G0016262	Mrpl40	93	31.410	Mus_pahari
WBGene00018793	mrpl-40	83	31.410	MGP_SPRETEiJ_G0021452	Mrpl40	93	31.410	Mus_spretus
WBGene00018793	mrpl-40	70	32.331	ENSMPUG00000003865	MRPL40	72	30.519	Mustela_putorius_furo
WBGene00018793	mrpl-40	70	33.835	ENSMLUG00000024620	-	72	31.818	Myotis_lucifugus
WBGene00018793	mrpl-40	70	33.835	ENSMLUG00000002456	-	72	31.818	Myotis_lucifugus
WBGene00018793	mrpl-40	72	37.143	ENSNGAG00000000304	Mrpl40	74	34.783	Nannospalax_galili
WBGene00018793	mrpl-40	53	33.981	ENSMEUG00000003868	-	68	33.981	Notamacropus_eugenii
WBGene00018793	mrpl-40	72	36.879	ENSODEG00000017051	MRPL40	73	35.000	Octodon_degus
WBGene00018793	mrpl-40	62	36.441	ENSONIG00000014393	mrpl40	73	35.484	Oreochromis_niloticus
WBGene00018793	mrpl-40	72	33.333	ENSOCUG00000009859	MRPL40	54	31.875	Oryctolagus_cuniculus
WBGene00018793	mrpl-40	62	37.288	ENSORLG00000002574	mrpl40	87	35.152	Oryzias_latipes
WBGene00018793	mrpl-40	62	36.441	ENSORLG00020005727	mrpl40	73	35.484	Oryzias_latipes_hni
WBGene00018793	mrpl-40	62	37.288	ENSORLG00015015422	mrpl40	73	36.129	Oryzias_latipes_hsok
WBGene00018793	mrpl-40	62	36.441	ENSOMEG00000017632	mrpl40	73	35.484	Oryzias_melastigma
WBGene00018793	mrpl-40	72	32.353	ENSOGAG00000030071	MRPL40	80	31.210	Otolemur_garnettii
WBGene00018793	mrpl-40	70	33.835	ENSPPRG00000004672	MRPL40	72	31.818	Panthera_pardus
WBGene00018793	mrpl-40	72	33.088	ENSPTIG00000003393	MRPL40	73	31.210	Panthera_tigris_altaica
WBGene00018793	mrpl-40	80	36.424	ENSPKIG00000024494	mrpl40	74	37.179	Paramormyrops_kingsleyae
WBGene00018793	mrpl-40	53	33.663	ENSPSIG00000003055	MRPL40	90	30.323	Pelodiscus_sinensis
WBGene00018793	mrpl-40	62	38.983	ENSPMGG00000018388	mrpl40	80	37.179	Periophthalmus_magnuspinnatus
WBGene00018793	mrpl-40	71	34.058	ENSPEMG00000017933	Mrpl40	73	32.075	Peromyscus_maniculatus_bairdii
WBGene00018793	mrpl-40	89	30.233	ENSPCIG00000025479	MRPL40	80	30.233	Phascolarctos_cinereus
WBGene00018793	mrpl-40	62	39.167	ENSPFOG00000012506	mrpl40	72	36.538	Poecilia_formosa
WBGene00018793	mrpl-40	62	38.983	ENSPLAG00000017335	mrpl40	73	36.774	Poecilia_latipinna
WBGene00018793	mrpl-40	62	38.983	ENSPMEG00000003881	mrpl40	73	36.774	Poecilia_mexicana
WBGene00018793	mrpl-40	62	38.136	ENSPREG00000011448	mrpl40	73	36.129	Poecilia_reticulata
WBGene00018793	mrpl-40	69	32.836	ENSPCAG00000007834	MRPL40	63	32.836	Procavia_capensis
WBGene00018793	mrpl-40	62	36.441	ENSPNYG00000008216	mrpl40	73	35.484	Pundamilia_nyererei
WBGene00018793	mrpl-40	62	38.983	ENSPNAG00000000310	mrpl40	96	36.774	Pygocentrus_nattereri
WBGene00018793	mrpl-40	83	33.125	ENSRNOG00000049686	Mrpl40	73	33.125	Rattus_norvegicus
WBGene00018793	mrpl-40	73	31.884	ENSRBIG00000023060	MRPL40	73	30.573	Rhinopithecus_bieti
WBGene00018793	mrpl-40	71	32.090	ENSRROG00000043837	MRPL40	71	30.719	Rhinopithecus_roxellana
WBGene00018793	mrpl-40	72	30.657	ENSSBOG00000031050	MRPL40	78	30.357	Saimiri_boliviensis_boliviensis
WBGene00018793	mrpl-40	79	35.333	ENSSFOG00015014220	mrpl40	77	35.897	Scleropages_formosus
WBGene00018793	mrpl-40	62	36.441	ENSSMAG00000006340	mrpl40	73	36.774	Scophthalmus_maximus
WBGene00018793	mrpl-40	82	35.484	ENSSDUG00000022994	mrpl40	73	35.484	Seriola_dumerili
WBGene00018793	mrpl-40	82	35.484	ENSSLDG00000009671	mrpl40	73	35.484	Seriola_lalandi_dorsalis
WBGene00018793	mrpl-40	70	37.226	ENSSARG00000003051	MRPL40	72	35.443	Sorex_araneus
WBGene00018793	mrpl-40	75	30.282	ENSSPUG00000015559	MRPL40	75	31.613	Sphenodon_punctatus
WBGene00018793	mrpl-40	62	36.441	ENSSPAG00000015481	mrpl40	73	34.839	Stegastes_partitus
WBGene00018793	mrpl-40	71	34.074	ENSSSCG00000034014	MRPL40	73	32.051	Sus_scrofa
WBGene00018793	mrpl-40	82	35.484	ENSTRUG00000025904	mrpl40	74	35.484	Takifugu_rubripes
WBGene00018793	mrpl-40	72	34.307	ENSTTRG00000014932	MRPL40	74	32.692	Tursiops_truncatus
WBGene00018793	mrpl-40	81	30.323	ENSUAMG00000007667	MRPL40	72	30.323	Ursus_americanus
WBGene00018793	mrpl-40	71	33.333	ENSVVUG00000025360	-	73	31.410	Vulpes_vulpes
WBGene00018793	mrpl-40	81	35.669	ENSXETG00000018600	mrpl40	74	35.669	Xenopus_tropicalis
WBGene00018793	mrpl-40	62	39.831	ENSXCOG00000002135	mrpl40	73	37.419	Xiphophorus_couchianus
WBGene00018793	mrpl-40	62	39.831	ENSXMAG00000014595	mrpl40	73	37.419	Xiphophorus_maculatus