EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00018890 (Gene tree)
Gene ID: -
Gene Symbol: F55F8.2
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3288 bases
Position: chrI:5646369-5649656
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F55F8	DEAD	PF00270.29	1.9e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F55F8.2b	-	2300	NR_144559	-	- (aa)	-	-
F55F8.2a	-	2351	NM_059251	F55F8.2a	746 (aa)	NP_491652	P91340

Gene Model

Click here to download WBGene00018890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00018890's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00018890	F55F8.2	54	31.527	WBGene00021277	Y23H5B.6	50	31.527
WBGene00018890	F55F8.2	52	31.969	WBGene00022148	ddx-27	53	31.422
WBGene00018890	F55F8.2	51	32.908	WBGene00019219	H20J04.4	70	32.216
WBGene00018890	F55F8.2	53	34.988	WBGene00012059	T26G10.1	72	34.491
WBGene00018890	F55F8.2	53	30.392	WBGene00019245	sacy-1	57	30.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00018890	F55F8.2	74	51.765	ENSG00000089737	DDX24	94	42.060	Homo_sapiens
WBGene00018890	F55F8.2	63	50.515	ENSAPOG00000014909	ddx24	67	43.607	Acanthochromis_polyacanthus
WBGene00018890	F55F8.2	72	50.000	ENSAMEG00000015848	DDX24	62	55.072	Ailuropoda_melanoleuca
WBGene00018890	F55F8.2	51	45.503	ENSACIG00000024338	ddx24	66	45.288	Amphilophus_citrinellus
WBGene00018890	F55F8.2	69	46.561	ENSAOCG00000006168	ddx24	67	43.607	Amphiprion_ocellaris
WBGene00018890	F55F8.2	69	46.296	ENSAPEG00000023765	ddx24	60	46.073	Amphiprion_percula
WBGene00018890	F55F8.2	63	57.692	ENSATEG00000022048	ddx24	57	57.895	Anabas_testudineus
WBGene00018890	F55F8.2	70	60.563	ENSAPLG00000011111	DDX24	62	60.870	Anas_platyrhynchos
WBGene00018890	F55F8.2	65	41.250	ENSACAG00000008545	DDX24	77	38.776	Anolis_carolinensis
WBGene00018890	F55F8.2	65	66.667	ENSANAG00000003080	DDX24	94	40.977	Aotus_nancymaae
WBGene00018890	F55F8.2	68	59.722	ENSACLG00000022194	ddx24	56	60.870	Astatotilapia_calliptera
WBGene00018890	F55F8.2	68	46.154	ENSAMXG00000014635	ddx24	59	45.902	Astyanax_mexicanus
WBGene00018890	F55F8.2	71	52.381	ENSBTAG00000003423	DDX24	60	57.353	Bos_taurus
WBGene00018890	F55F8.2	70	55.556	ENSCJAG00000009683	DDX24	94	41.202	Callithrix_jacchus
WBGene00018890	F55F8.2	71	50.588	ENSCAFG00000017624	DDX24	72	55.072	Canis_familiaris
WBGene00018890	F55F8.2	71	50.588	ENSCAFG00020014505	DDX24	62	55.072	Canis_lupus_dingo
WBGene00018890	F55F8.2	71	52.381	ENSCHIG00000010074	DDX24	61	57.353	Capra_hircus
WBGene00018890	F55F8.2	58	41.244	ENSTSYG00000025429	-	95	41.244	Carlito_syrichta
WBGene00018890	F55F8.2	68	58.974	ENSTSYG00000030376	-	81	40.329	Carlito_syrichta
WBGene00018890	F55F8.2	60	41.319	ENSCAPG00000007592	DDX24	66	39.425	Cavia_aperea
WBGene00018890	F55F8.2	74	42.637	ENSCPOG00000005884	DDX24	71	42.451	Cavia_porcellus
WBGene00018890	F55F8.2	70	55.556	ENSCCAG00000036112	DDX24	93	40.977	Cebus_capucinus
WBGene00018890	F55F8.2	72	56.944	ENSCATG00000038277	DDX24	70	45.968	Cercocebus_atys
WBGene00018890	F55F8.2	74	52.941	ENSCLAG00000011454	DDX24	67	57.971	Chinchilla_lanigera
WBGene00018890	F55F8.2	72	56.944	ENSCSAG00000010975	DDX24	69	45.161	Chlorocebus_sabaeus
WBGene00018890	F55F8.2	71	50.515	ENSCPBG00000008942	DDX24	61	60.294	Chrysemys_picta_bellii
WBGene00018890	F55F8.2	61	42.798	ENSCING00000003655	-	84	39.796	Ciona_intestinalis
WBGene00018890	F55F8.2	77	40.128	ENSCSAVG00000001436	-	87	40.128	Ciona_savignyi
WBGene00018890	F55F8.2	74	36.316	ENSCANG00000031880	-	77	41.333	Colobus_angolensis_palliatus
WBGene00018890	F55F8.2	72	56.944	ENSCANG00000035722	-	67	42.276	Colobus_angolensis_palliatus
WBGene00018890	F55F8.2	71	51.765	ENSCGRG00001009522	Ddx24	62	55.714	Cricetulus_griseus_chok1gshd
WBGene00018890	F55F8.2	71	51.765	ENSCGRG00000015047	Ddx24	62	55.714	Cricetulus_griseus_crigri
WBGene00018890	F55F8.2	74	47.619	ENSCSEG00000001004	ddx24	65	44.394	Cynoglossus_semilaevis
WBGene00018890	F55F8.2	53	45.153	ENSCVAG00000005890	ddx24	71	45.340	Cyprinodon_variegatus
WBGene00018890	F55F8.2	70	46.465	ENSDARG00000104708	ddx24	82	44.909	Danio_rerio
WBGene00018890	F55F8.2	73	45.714	ENSDNOG00000005339	DDX24	62	49.412	Dasypus_novemcinctus
WBGene00018890	F55F8.2	73	55.556	ENSDORG00000003636	Ddx24	98	39.595	Dipodomys_ordii
WBGene00018890	F55F8.2	85	35.854	FBgn0034496	CG9143	86	35.815	Drosophila_melanogaster
WBGene00018890	F55F8.2	69	51.765	ENSETEG00000009693	DDX24	60	56.522	Echinops_telfairi
WBGene00018890	F55F8.2	50	38.051	ENSEBUG00000015781	-	72	35.616	Eptatretus_burgeri
WBGene00018890	F55F8.2	71	47.170	ENSEASG00005021430	DDX24	64	50.000	Equus_asinus_asinus
WBGene00018890	F55F8.2	72	46.729	ENSECAG00000008887	DDX24	59	50.000	Equus_caballus
WBGene00018890	F55F8.2	69	50.588	ENSEEUG00000001618	DDX24	58	52.174	Erinaceus_europaeus
WBGene00018890	F55F8.2	69	47.619	ENSELUG00000009567	ddx24	58	50.000	Esox_lucius
WBGene00018890	F55F8.2	71	50.588	ENSFCAG00000010229	DDX24	63	55.072	Felis_catus
WBGene00018890	F55F8.2	72	58.333	ENSFALG00000002491	DDX24	67	59.420	Ficedula_albicollis
WBGene00018890	F55F8.2	75	52.941	ENSFDAG00000014561	DDX24	68	57.971	Fukomys_damarensis
WBGene00018890	F55F8.2	65	46.891	ENSFHEG00000010949	ddx24	77	37.348	Fundulus_heteroclitus
WBGene00018890	F55F8.2	62	41.794	ENSGMOG00000010403	ddx24	65	41.856	Gadus_morhua
WBGene00018890	F55F8.2	67	59.155	ENSGALG00000010884	DDX24	61	59.420	Gallus_gallus
WBGene00018890	F55F8.2	51	44.974	ENSGAFG00000009607	ddx24	87	42.466	Gambusia_affinis
WBGene00018890	F55F8.2	67	47.439	ENSGACG00000008087	ddx24	59	47.382	Gasterosteus_aculeatus
WBGene00018890	F55F8.2	74	51.765	ENSGGOG00000006739	DDX24	94	43.287	Gorilla_gorilla
WBGene00018890	F55F8.2	68	59.722	ENSHBUG00000021747	ddx24	64	43.678	Haplochromis_burtoni
WBGene00018890	F55F8.2	74	39.739	ENSHGLG00000010321	-	73	40.614	Heterocephalus_glaber_female
WBGene00018890	F55F8.2	77	42.857	ENSHGLG00000003177	-	82	55.072	Heterocephalus_glaber_female
WBGene00018890	F55F8.2	74	52.941	ENSHGLG00100013439	DDX24	65	57.971	Heterocephalus_glaber_male
WBGene00018890	F55F8.2	64	45.333	ENSHCOG00000019867	ddx24	69	45.550	Hippocampus_comes
WBGene00018890	F55F8.2	69	57.895	ENSIPUG00000007005	ddx24	62	44.275	Ictalurus_punctatus
WBGene00018890	F55F8.2	71	52.941	ENSSTOG00000005355	DDX24	60	57.971	Ictidomys_tridecemlineatus
WBGene00018890	F55F8.2	70	54.167	ENSJJAG00000010842	Ddx24	61	55.072	Jaculus_jaculus
WBGene00018890	F55F8.2	62	61.111	ENSKMAG00000004507	ddx24	59	62.319	Kryptolebias_marmoratus
WBGene00018890	F55F8.2	63	55.696	ENSLBEG00000020888	ddx24	60	44.724	Labrus_bergylta
WBGene00018890	F55F8.2	70	47.423	ENSLACG00000006072	DDX24	79	40.613	Latimeria_chalumnae
WBGene00018890	F55F8.2	68	56.757	ENSLOCG00000012997	ddx24	59	59.420	Lepisosteus_oculatus
WBGene00018890	F55F8.2	72	51.087	ENSLAFG00000029076	DDX24	60	56.522	Loxodonta_africana
WBGene00018890	F55F8.2	72	56.944	ENSMFAG00000033695	DDX24	70	45.161	Macaca_fascicularis
WBGene00018890	F55F8.2	72	56.944	ENSMMUG00000007763	DDX24	94	43.519	Macaca_mulatta
WBGene00018890	F55F8.2	72	56.944	ENSMNEG00000043984	DDX24	70	45.161	Macaca_nemestrina
WBGene00018890	F55F8.2	72	56.944	ENSMLEG00000039614	DDX24	67	45.161	Mandrillus_leucophaeus
WBGene00018890	F55F8.2	62	55.696	ENSMAMG00000003235	ddx24	51	57.333	Mastacembelus_armatus
WBGene00018890	F55F8.2	68	59.722	ENSMZEG00005008402	ddx24	56	60.870	Maylandia_zebra
WBGene00018890	F55F8.2	70	59.155	ENSMGAG00000013175	DDX24	64	59.420	Meleagris_gallopavo
WBGene00018890	F55F8.2	71	50.588	ENSMAUG00000020026	Ddx24	61	55.072	Mesocricetus_auratus
WBGene00018890	F55F8.2	70	55.556	ENSMICG00000008376	DDX24	78	42.418	Microcebus_murinus
WBGene00018890	F55F8.2	71	50.588	ENSMOCG00000013171	Ddx24	80	41.189	Microtus_ochrogaster
WBGene00018890	F55F8.2	65	46.218	ENSMMOG00000013945	ddx24	81	45.812	Mola_mola
WBGene00018890	F55F8.2	70	54.321	ENSMODG00000002336	DDX24	75	38.685	Monodelphis_domestica
WBGene00018890	F55F8.2	67	60.870	ENSMALG00000007688	ddx24	62	43.349	Monopterus_albus
WBGene00018890	F55F8.2	68	54.167	MGP_CAROLIEiJ_G0018053	Ddx24	62	42.593	Mus_caroli
WBGene00018890	F55F8.2	70	54.167	ENSMUSG00000041645	Ddx24	63	44.103	Mus_musculus
WBGene00018890	F55F8.2	57	54.167	MGP_SPRETEiJ_G0018898	Ddx24	57	43.020	Mus_spretus
WBGene00018890	F55F8.2	72	50.000	ENSMPUG00000003318	DDX24	70	55.072	Mustela_putorius_furo
WBGene00018890	F55F8.2	75	55.556	ENSMLUG00000001158	DDX24	63	56.522	Myotis_lucifugus
WBGene00018890	F55F8.2	71	48.235	ENSNGAG00000014769	-	63	51.429	Nannospalax_galili
WBGene00018890	F55F8.2	69	51.765	ENSNGAG00000001003	-	62	56.522	Nannospalax_galili
WBGene00018890	F55F8.2	72	46.018	ENSNBRG00000007296	ddx24	56	60.870	Neolamprologus_brichardi
WBGene00018890	F55F8.2	60	38.000	ENSNLEG00000017240	DDX24	75	38.000	Nomascus_leucogenys
WBGene00018890	F55F8.2	61	53.521	ENSMEUG00000010386	-	64	46.073	Notamacropus_eugenii
WBGene00018890	F55F8.2	69	52.941	ENSOPRG00000000562	DDX24	58	57.971	Ochotona_princeps
WBGene00018890	F55F8.2	72	52.941	ENSODEG00000002236	-	94	42.956	Octodon_degus
WBGene00018890	F55F8.2	77	42.601	ENSONIG00000020143	ddx24	68	43.448	Oreochromis_niloticus
WBGene00018890	F55F8.2	50	31.606	ENSOANG00000002839	-	99	32.124	Ornithorhynchus_anatinus
WBGene00018890	F55F8.2	73	54.167	ENSOCUG00000002604	DDX24	64	56.522	Oryctolagus_cuniculus
WBGene00018890	F55F8.2	75	42.336	ENSORLG00000004581	ddx24	58	60.000	Oryzias_latipes
WBGene00018890	F55F8.2	75	42.336	ENSORLG00020008743	ddx24	52	60.000	Oryzias_latipes_hni
WBGene00018890	F55F8.2	74	43.077	ENSORLG00015007758	ddx24	58	60.000	Oryzias_latipes_hsok
WBGene00018890	F55F8.2	70	46.032	ENSOMEG00000023149	ddx24	56	46.739	Oryzias_melastigma
WBGene00018890	F55F8.2	71	54.054	ENSOGAG00000005841	DDX24	65	42.063	Otolemur_garnettii
WBGene00018890	F55F8.2	69	52.381	ENSOARG00000014341	DDX24	57	57.353	Ovis_aries
WBGene00018890	F55F8.2	74	51.765	ENSPPAG00000038713	DDX24	94	42.060	Pan_paniscus
WBGene00018890	F55F8.2	71	50.588	ENSPPRG00000007394	DDX24	63	55.072	Panthera_pardus
WBGene00018890	F55F8.2	71	50.588	ENSPTIG00000013158	DDX24	62	55.072	Panthera_tigris_altaica
WBGene00018890	F55F8.2	74	51.765	ENSPTRG00000006673	DDX24	94	42.060	Pan_troglodytes
WBGene00018890	F55F8.2	72	56.944	ENSPANG00000022385	DDX24	70	45.161	Papio_anubis
WBGene00018890	F55F8.2	61	56.944	ENSPKIG00000005168	ddx24	59	44.764	Paramormyrops_kingsleyae
WBGene00018890	F55F8.2	70	41.136	ENSPSIG00000009329	DDX24	62	60.294	Pelodiscus_sinensis
WBGene00018890	F55F8.2	58	43.678	ENSPMGG00000019572	ddx24	88	43.187	Periophthalmus_magnuspinnatus
WBGene00018890	F55F8.2	71	50.588	ENSPEMG00000018618	Ddx24	66	41.266	Peromyscus_maniculatus_bairdii
WBGene00018890	F55F8.2	69	51.250	ENSPCIG00000026635	DDX24	75	38.295	Phascolarctos_cinereus
WBGene00018890	F55F8.2	68	45.238	ENSPFOG00000011214	ddx24	89	42.928	Poecilia_formosa
WBGene00018890	F55F8.2	61	57.500	ENSPLAG00000010940	ddx24	87	42.273	Poecilia_latipinna
WBGene00018890	F55F8.2	51	44.974	ENSPMEG00000006458	ddx24	87	42.627	Poecilia_mexicana
WBGene00018890	F55F8.2	65	46.957	ENSPREG00000014459	ddx24	86	42.396	Poecilia_reticulata
WBGene00018890	F55F8.2	73	51.765	ENSPPYG00000006095	DDX24	69	43.548	Pongo_abelii
WBGene00018890	F55F8.2	70	55.556	ENSPCAG00000002873	DDX24	61	56.522	Procavia_capensis
WBGene00018890	F55F8.2	72	55.556	ENSPCOG00000018298	DDX24	82	40.000	Propithecus_coquereli
WBGene00018890	F55F8.2	70	51.087	ENSPVAG00000015101	DDX24	57	56.522	Pteropus_vampyrus
WBGene00018890	F55F8.2	68	59.722	ENSPNYG00000022795	ddx24	64	43.678	Pundamilia_nyererei
WBGene00018890	F55F8.2	64	47.222	ENSPNAG00000008956	ddx24	53	60.000	Pygocentrus_nattereri
WBGene00018890	F55F8.2	71	50.588	ENSRNOG00000009166	Ddx24	61	55.072	Rattus_norvegicus
WBGene00018890	F55F8.2	72	55.556	ENSRBIG00000039022	DDX24	92	41.794	Rhinopithecus_bieti
WBGene00018890	F55F8.2	60	40.667	ENSRROG00000039473	-	93	40.129	Rhinopithecus_roxellana
WBGene00018890	F55F8.2	72	55.556	ENSRROG00000023933	-	92	38.293	Rhinopithecus_roxellana
WBGene00018890	F55F8.2	63	31.166	YBR142W	-	66	31.179	Saccharomyces_cerevisiae
WBGene00018890	F55F8.2	70	55.556	ENSSBOG00000035521	DDX24	96	40.741	Saimiri_boliviensis_boliviensis
WBGene00018890	F55F8.2	70	41.522	ENSSHAG00000009060	DDX24	75	39.403	Sarcophilus_harrisii
WBGene00018890	F55F8.2	61	59.459	ENSSFOG00015015044	ddx24	51	62.857	Scleropages_formosus
WBGene00018890	F55F8.2	61	56.944	ENSSMAG00000002784	ddx24	50	57.143	Scophthalmus_maximus
WBGene00018890	F55F8.2	62	59.722	ENSSDUG00000001658	ddx24	57	60.000	Seriola_dumerili
WBGene00018890	F55F8.2	76	59.722	ENSSLDG00000019202	ddx24	51	60.000	Seriola_lalandi_dorsalis
WBGene00018890	F55F8.2	74	40.554	ENSSPUG00000017730	DDX24	71	41.338	Sphenodon_punctatus
WBGene00018890	F55F8.2	73	42.202	ENSSPAG00000011620	ddx24	53	52.326	Stegastes_partitus
WBGene00018890	F55F8.2	70	56.338	ENSSSCG00000002470	DDX24	78	45.217	Sus_scrofa
WBGene00018890	F55F8.2	60	43.333	ENSTGUG00000012637	-	93	43.333	Taeniopygia_guttata
WBGene00018890	F55F8.2	63	41.538	ENSTRUG00000006101	ddx24	61	41.313	Takifugu_rubripes
WBGene00018890	F55F8.2	62	42.739	ENSTNIG00000017368	ddx24	63	42.363	Tetraodon_nigroviridis
WBGene00018890	F55F8.2	72	50.000	ENSTTRG00000008795	DDX24	63	55.072	Tursiops_truncatus
WBGene00018890	F55F8.2	60	40.351	ENSUAMG00000024662	DDX24	95	39.832	Ursus_americanus
WBGene00018890	F55F8.2	72	50.549	ENSUMAG00000004481	DDX24	62	55.072	Ursus_maritimus
WBGene00018890	F55F8.2	73	45.000	ENSVVUG00000018672	DDX24	72	55.072	Vulpes_vulpes
WBGene00018890	F55F8.2	87	44.191	ENSXETG00000010314	ddx24	63	57.971	Xenopus_tropicalis
WBGene00018890	F55F8.2	50	43.467	ENSXMAG00000013600	ddx24	79	41.149	Xiphophorus_maculatus