EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00018891 (Gene tree)
Gene ID: -
Gene Symbol: F55F8.3
Alias: -
Full Name: Periodic tryptophan protein 2 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3893 bases
Position: chrI:5649756-5653648
Accession: P91341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F55F8	Utp12	PF04003.12	9.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F55F8.3	-	3012	NM_059252	F55F8.3	910 (aa)	NP_491653	P91341

Gene Model

Click here to download WBGene00018891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00018891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00018891	F55F8.3	96	38.122	ENSG00000241945	PWP2	96	38.350	Homo_sapiens
WBGene00018891	F55F8.3	95	38.753	ENSAPOG00000021522	pwp2h	95	39.096	Acanthochromis_polyacanthus
WBGene00018891	F55F8.3	97	37.596	ENSAMEG00000010907	-	96	38.375	Ailuropoda_melanoleuca
WBGene00018891	F55F8.3	95	38.402	ENSACIG00000024109	pwp2h	96	38.796	Amphilophus_citrinellus
WBGene00018891	F55F8.3	98	38.194	ENSAOCG00000014853	pwp2h	97	38.410	Amphiprion_ocellaris
WBGene00018891	F55F8.3	96	38.530	ENSAPEG00000008152	pwp2h	96	38.410	Amphiprion_percula
WBGene00018891	F55F8.3	96	38.222	ENSATEG00000015493	pwp2h	100	38.971	Anabas_testudineus
WBGene00018891	F55F8.3	95	39.731	ENSAPLG00000010371	-	95	39.820	Anas_platyrhynchos
WBGene00018891	F55F8.3	98	38.985	ENSACAG00000017861	-	96	39.350	Anolis_carolinensis
WBGene00018891	F55F8.3	96	38.190	ENSANAG00000034845	-	95	38.796	Aotus_nancymaae
WBGene00018891	F55F8.3	95	37.721	ENSACLG00000011425	pwp2h	96	37.820	Astatotilapia_calliptera
WBGene00018891	F55F8.3	99	39.006	ENSAMXG00000007988	pwp2h	98	38.388	Astyanax_mexicanus
WBGene00018891	F55F8.3	99	37.634	ENSBTAG00000007105	-	95	38.436	Bos_taurus
WBGene00018891	F55F8.3	96	38.717	ENSCJAG00000005570	-	95	39.218	Callithrix_jacchus
WBGene00018891	F55F8.3	98	37.568	ENSCAFG00000010687	-	95	38.255	Canis_familiaris
WBGene00018891	F55F8.3	83	37.245	ENSCAFG00020019199	-	87	38.045	Canis_lupus_dingo
WBGene00018891	F55F8.3	96	35.886	ENSCHIG00000026362	-	95	36.283	Capra_hircus
WBGene00018891	F55F8.3	99	38.568	ENSTSYG00000009022	-	95	39.438	Carlito_syrichta
WBGene00018891	F55F8.3	99	37.299	ENSCAPG00000017934	-	95	38.063	Cavia_aperea
WBGene00018891	F55F8.3	99	37.167	ENSCPOG00000023616	-	95	37.919	Cavia_porcellus
WBGene00018891	F55F8.3	96	38.122	ENSCCAG00000034616	-	95	38.951	Cebus_capucinus
WBGene00018891	F55F8.3	96	38.190	ENSCATG00000032550	-	96	38.462	Cercocebus_atys
WBGene00018891	F55F8.3	99	37.675	ENSCLAG00000009503	-	96	38.479	Chinchilla_lanigera
WBGene00018891	F55F8.3	96	37.748	ENSCSAG00000007903	-	96	38.239	Chlorocebus_sabaeus
WBGene00018891	F55F8.3	95	38.367	ENSCPBG00000018335	-	96	38.565	Chrysemys_picta_bellii
WBGene00018891	F55F8.3	97	38.556	ENSCSAVG00000004186	-	97	39.160	Ciona_savignyi
WBGene00018891	F55F8.3	96	38.122	ENSCANG00000028013	-	96	38.393	Colobus_angolensis_palliatus
WBGene00018891	F55F8.3	98	37.756	ENSCGRG00001020074	Pwp2	95	38.513	Cricetulus_griseus_chok1gshd
WBGene00018891	F55F8.3	98	37.756	ENSCGRG00000003750	Pwp2	95	38.513	Cricetulus_griseus_crigri
WBGene00018891	F55F8.3	96	38.393	ENSCSEG00000000861	pwp2h	96	38.695	Cynoglossus_semilaevis
WBGene00018891	F55F8.3	95	38.932	ENSCVAG00000000996	pwp2h	97	39.374	Cyprinodon_variegatus
WBGene00018891	F55F8.3	98	38.323	ENSDARG00000037109	pwp2h	95	38.699	Danio_rerio
WBGene00018891	F55F8.3	81	37.971	ENSDNOG00000012128	-	95	38.442	Dasypus_novemcinctus
WBGene00018891	F55F8.3	91	37.799	ENSDORG00000003015	Pwp2	91	37.890	Dipodomys_ordii
WBGene00018891	F55F8.3	98	35.591	FBgn0033557	CG12325	94	36.283	Drosophila_melanogaster
WBGene00018891	F55F8.3	82	39.685	ENSEBUG00000003140	pwp2h	92	39.840	Eptatretus_burgeri
WBGene00018891	F55F8.3	97	37.856	ENSEASG00005001651	-	95	38.530	Equus_asinus_asinus
WBGene00018891	F55F8.3	97	37.800	ENSECAG00000006090	-	98	38.361	Equus_caballus
WBGene00018891	F55F8.3	99	38.248	ENSELUG00000001878	pwp2h	96	38.796	Esox_lucius
WBGene00018891	F55F8.3	96	38.624	ENSFCAG00000004487	-	96	39.150	Felis_catus
WBGene00018891	F55F8.3	99	37.823	ENSFALG00000012300	-	96	39.394	Ficedula_albicollis
WBGene00018891	F55F8.3	97	37.514	ENSFDAG00000016140	-	95	38.122	Fukomys_damarensis
WBGene00018891	F55F8.3	93	39.339	ENSFHEG00000009078	pwp2h	100	39.681	Fundulus_heteroclitus
WBGene00018891	F55F8.3	95	37.683	ENSGMOG00000016522	pwp2h	95	38.245	Gadus_morhua
WBGene00018891	F55F8.3	97	39.454	ENSGALG00000045726	-	96	39.843	Gallus_gallus
WBGene00018891	F55F8.3	98	38.396	ENSGAFG00000011340	pwp2h	96	38.685	Gambusia_affinis
WBGene00018891	F55F8.3	96	38.631	ENSGACG00000014928	pwp2h	99	40.674	Gasterosteus_aculeatus
WBGene00018891	F55F8.3	99	38.013	ENSGAGG00000005377	-	96	38.341	Gopherus_agassizii
WBGene00018891	F55F8.3	96	38.079	ENSGGOG00000041875	-	96	38.419	Gorilla_gorilla
WBGene00018891	F55F8.3	95	37.942	ENSHBUG00000005530	pwp2h	96	38.042	Haplochromis_burtoni
WBGene00018891	F55F8.3	97	37.514	ENSHGLG00000017401	-	96	37.978	Heterocephalus_glaber_female
WBGene00018891	F55F8.3	96	37.528	ENSHGLG00100013888	-	96	37.993	Heterocephalus_glaber_male
WBGene00018891	F55F8.3	97	38.453	ENSHCOG00000018121	pwp2h	95	38.926	Hippocampus_comes
WBGene00018891	F55F8.3	98	38.682	ENSIPUG00000014074	pwp2h	96	39.231	Ictalurus_punctatus
WBGene00018891	F55F8.3	99	38.503	ENSSTOG00000014194	-	95	38.796	Ictidomys_tridecemlineatus
WBGene00018891	F55F8.3	98	37.991	ENSJJAG00000013039	Pwp2	96	38.634	Jaculus_jaculus
WBGene00018891	F55F8.3	96	38.589	ENSKMAG00000003143	pwp2h	96	39.174	Kryptolebias_marmoratus
WBGene00018891	F55F8.3	95	37.277	ENSLBEG00000006388	pwp2h	96	38.031	Labrus_bergylta
WBGene00018891	F55F8.3	95	34.749	ENSLACG00000006084	pwp2h	96	35.370	Latimeria_chalumnae
WBGene00018891	F55F8.3	99	37.664	ENSLOCG00000003663	pwp2h	95	38.052	Lepisosteus_oculatus
WBGene00018891	F55F8.3	94	39.588	ENSLAFG00000003871	-	99	39.931	Loxodonta_africana
WBGene00018891	F55F8.3	96	38.079	ENSMFAG00000044448	-	96	38.350	Macaca_fascicularis
WBGene00018891	F55F8.3	96	38.079	ENSMMUG00000005271	PWP2	96	38.350	Macaca_mulatta
WBGene00018891	F55F8.3	96	38.079	ENSMNEG00000030782	-	96	38.350	Macaca_nemestrina
WBGene00018891	F55F8.3	96	38.122	ENSMLEG00000039860	-	96	38.350	Mandrillus_leucophaeus
WBGene00018891	F55F8.3	95	37.931	ENSMAMG00000022327	pwp2h	97	38.479	Mastacembelus_armatus
WBGene00018891	F55F8.3	95	37.652	ENSMZEG00005015448	pwp2h	96	38.069	Maylandia_zebra
WBGene00018891	F55F8.3	98	35.683	ENSMGAG00000014596	-	95	35.635	Meleagris_gallopavo
WBGene00018891	F55F8.3	99	37.648	ENSMICG00000001002	-	95	38.608	Microcebus_murinus
WBGene00018891	F55F8.3	99	37.633	ENSMOCG00000003844	Pwp2	95	38.598	Microtus_ochrogaster
WBGene00018891	F55F8.3	93	37.773	ENSMMOG00000000882	pwp2h	98	38.002	Mola_mola
WBGene00018891	F55F8.3	98	38.478	ENSMODG00000021081	-	96	39.418	Monodelphis_domestica
WBGene00018891	F55F8.3	99	37.647	ENSMALG00000000821	pwp2h	96	38.487	Monopterus_albus
WBGene00018891	F55F8.3	97	38.184	MGP_CAROLIEiJ_G0015505	Pwp2	96	38.229	Mus_caroli
WBGene00018891	F55F8.3	97	37.758	ENSMUSG00000032834	Pwp2	96	38.239	Mus_musculus
WBGene00018891	F55F8.3	98	37.879	MGP_PahariEiJ_G0030918	Pwp2	96	38.462	Mus_pahari
WBGene00018891	F55F8.3	97	37.758	MGP_SPRETEiJ_G0016318	Pwp2	96	38.239	Mus_spretus
WBGene00018891	F55F8.3	82	38.581	ENSMPUG00000009936	-	94	38.925	Mustela_putorius_furo
WBGene00018891	F55F8.3	97	35.115	ENSMLUG00000004823	-	95	35.419	Myotis_lucifugus
WBGene00018891	F55F8.3	99	37.835	ENSNGAG00000021106	Pwp2	96	38.547	Nannospalax_galili
WBGene00018891	F55F8.3	95	37.037	ENSNBRG00000016527	pwp2h	96	36.911	Neolamprologus_brichardi
WBGene00018891	F55F8.3	96	37.901	ENSNLEG00000001928	-	99	38.127	Nomascus_leucogenys
WBGene00018891	F55F8.3	99	37.338	ENSODEG00000013073	-	96	38.176	Octodon_degus
WBGene00018891	F55F8.3	95	38.164	ENSONIG00000007136	pwp2h	96	38.376	Oreochromis_niloticus
WBGene00018891	F55F8.3	96	37.199	ENSOANG00000006477	-	96	37.681	Ornithorhynchus_anatinus
WBGene00018891	F55F8.3	98	38.895	ENSORLG00000000066	pwp2h	96	39.238	Oryzias_latipes
WBGene00018891	F55F8.3	98	38.787	ENSORLG00020000321	pwp2h	96	39.238	Oryzias_latipes_hni
WBGene00018891	F55F8.3	98	36.620	ENSORLG00015014731	pwp2h	96	36.996	Oryzias_latipes_hsok
WBGene00018891	F55F8.3	96	37.838	ENSOMEG00000020671	pwp2h	97	37.673	Oryzias_melastigma
WBGene00018891	F55F8.3	95	38.479	ENSOGAG00000012473	-	96	39.013	Otolemur_garnettii
WBGene00018891	F55F8.3	96	38.132	ENSOARG00000011672	-	95	38.556	Ovis_aries
WBGene00018891	F55F8.3	96	38.122	ENSPPAG00000037874	-	96	38.350	Pan_paniscus
WBGene00018891	F55F8.3	96	38.427	ENSPPRG00000011088	-	96	38.808	Panthera_pardus
WBGene00018891	F55F8.3	96	35.459	ENSPTIG00000020872	-	95	35.811	Panthera_tigris_altaica
WBGene00018891	F55F8.3	96	38.122	ENSPTRG00000013969	-	96	38.350	Pan_troglodytes
WBGene00018891	F55F8.3	96	37.969	ENSPANG00000006267	-	96	38.239	Papio_anubis
WBGene00018891	F55F8.3	93	39.408	ENSPKIG00000002693	pwp2h	100	39.859	Paramormyrops_kingsleyae
WBGene00018891	F55F8.3	95	38.496	ENSPSIG00000009783	-	96	38.583	Pelodiscus_sinensis
WBGene00018891	F55F8.3	96	38.641	ENSPMGG00000022349	pwp2h	96	38.721	Periophthalmus_magnuspinnatus
WBGene00018891	F55F8.3	96	38.284	ENSPEMG00000009968	Pwp2	95	38.710	Peromyscus_maniculatus_bairdii
WBGene00018891	F55F8.3	98	39.328	ENSPCIG00000014548	-	96	40.090	Phascolarctos_cinereus
WBGene00018891	F55F8.3	95	39.116	ENSPFOG00000014764	pwp2h	96	39.330	Poecilia_formosa
WBGene00018891	F55F8.3	95	39.006	ENSPLAG00000011559	pwp2h	96	39.218	Poecilia_latipinna
WBGene00018891	F55F8.3	95	39.337	ENSPMEG00000021347	pwp2h	96	39.553	Poecilia_mexicana
WBGene00018891	F55F8.3	95	39.227	ENSPREG00000015887	pwp2h	96	39.441	Poecilia_reticulata
WBGene00018891	F55F8.3	96	38.581	ENSPPYG00000011478	-	95	38.591	Pongo_abelii
WBGene00018891	F55F8.3	99	36.870	ENSPCAG00000004676	-	96	37.095	Procavia_capensis
WBGene00018891	F55F8.3	95	38.324	ENSPCOG00000012856	-	96	38.410	Propithecus_coquereli
WBGene00018891	F55F8.3	99	35.584	ENSPVAG00000002312	-	95	36.455	Pteropus_vampyrus
WBGene00018891	F55F8.3	65	40.667	ENSPNYG00000008379	pwp2h	81	40.940	Pundamilia_nyererei
WBGene00018891	F55F8.3	96	37.856	ENSPNAG00000017876	pwp2h	95	38.803	Pygocentrus_nattereri
WBGene00018891	F55F8.3	97	38.111	ENSRNOG00000001210	Pwp2	96	38.598	Rattus_norvegicus
WBGene00018891	F55F8.3	96	38.564	ENSRBIG00000034365	-	96	38.616	Rhinopithecus_bieti
WBGene00018891	F55F8.3	89	46.667	ENSRROG00000031946	-	95	46.667	Rhinopithecus_roxellana
WBGene00018891	F55F8.3	96	33.747	YCR057C	PWP2	92	34.593	Saccharomyces_cerevisiae
WBGene00018891	F55F8.3	96	38.402	ENSSBOG00000034554	-	95	38.901	Saimiri_boliviensis_boliviensis
WBGene00018891	F55F8.3	98	38.184	ENSSFOG00015003316	pwp2	96	38.750	Scleropages_formosus
WBGene00018891	F55F8.3	95	37.989	ENSSMAG00000011839	pwp2h	95	38.074	Scophthalmus_maximus
WBGene00018891	F55F8.3	96	38.127	ENSSDUG00000011462	pwp2h	95	38.539	Seriola_dumerili
WBGene00018891	F55F8.3	96	37.889	ENSSLDG00000008651	pwp2h	95	38.522	Seriola_lalandi_dorsalis
WBGene00018891	F55F8.3	98	38.614	ENSSPUG00000002980	-	98	39.008	Sphenodon_punctatus
WBGene00018891	F55F8.3	96	38.258	ENSSPAG00000023368	pwp2h	96	38.753	Stegastes_partitus
WBGene00018891	F55F8.3	99	37.849	ENSSSCG00000029627	-	95	38.496	Sus_scrofa
WBGene00018891	F55F8.3	95	38.677	ENSTGUG00000005996	-	99	39.506	Taeniopygia_guttata
WBGene00018891	F55F8.3	63	40.587	ENSTGUG00000018216	-	99	40.587	Taeniopygia_guttata
WBGene00018891	F55F8.3	97	39.168	ENSTRUG00000013258	pwp2h	97	39.326	Takifugu_rubripes
WBGene00018891	F55F8.3	97	38.571	ENSTNIG00000010613	pwp2h	97	38.626	Tetraodon_nigroviridis
WBGene00018891	F55F8.3	80	39.509	ENSTBEG00000015597	-	85	39.962	Tupaia_belangeri
WBGene00018891	F55F8.3	93	39.792	ENSTTRG00000006728	-	100	39.450	Tursiops_truncatus
WBGene00018891	F55F8.3	96	37.832	ENSUAMG00000019031	-	96	38.245	Ursus_americanus
WBGene00018891	F55F8.3	96	36.726	ENSUMAG00000025481	-	95	37.008	Ursus_maritimus
WBGene00018891	F55F8.3	97	37.596	ENSVVUG00000024125	-	95	38.079	Vulpes_vulpes
WBGene00018891	F55F8.3	95	36.575	ENSXCOG00000020474	pwp2h	96	37.012	Xiphophorus_couchianus
WBGene00018891	F55F8.3	98	39.056	ENSXMAG00000008124	pwp2h	96	39.242	Xiphophorus_maculatus