EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00018961 (Gene tree)
Gene ID: -
Gene Symbol: mrps-16
Alias: -
Full Name: Probable 28S ribosomal protein S16%2C mitochondrial
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 1103 bases
Position: chrII:5474373-5475475
Accession: Q10129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
F56D1	Ribosomal_S16	PF00886.19	2.9e-14	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
F56D1.3	-	664	-	F56D1.3	147 (aa)	NP_001022207	Q10129

Gene Model

Click here to download WBGene00018961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00018961's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00018961	mrps-16	87	42.969	ENSG00000182180	MRPS16	80	49.398	Homo_sapiens
WBGene00018961	mrps-16	76	46.087	ENSAPOG00000012117	mrps16	80	46.087	Acanthochromis_polyacanthus
WBGene00018961	mrps-16	81	45.736	ENSAMEG00000016931	MRPS16	84	45.763	Ailuropoda_melanoleuca
WBGene00018961	mrps-16	76	46.087	ENSACIG00000008004	mrps16	81	46.087	Amphilophus_citrinellus
WBGene00018961	mrps-16	76	46.087	ENSAOCG00000006801	mrps16	80	46.087	Amphiprion_ocellaris
WBGene00018961	mrps-16	76	46.957	ENSAPEG00000004562	mrps16	80	46.957	Amphiprion_percula
WBGene00018961	mrps-16	94	41.549	ENSATEG00000024962	mrps16	85	44.262	Anabas_testudineus
WBGene00018961	mrps-16	94	40.288	ENSANAG00000036208	MRPS16	91	44.681	Aotus_nancymaae
WBGene00018961	mrps-16	94	41.844	ENSACLG00000016154	mrps16	78	45.946	Astatotilapia_calliptera
WBGene00018961	mrps-16	73	46.789	ENSAMXG00000040279	mrps16	80	46.789	Astyanax_mexicanus
WBGene00018961	mrps-16	61	43.333	ENSBTAG00000053412	-	78	43.333	Bos_taurus
WBGene00018961	mrps-16	89	42.857	ENSBTAG00000000950	MRPS16	84	46.154	Bos_taurus
WBGene00018961	mrps-16	94	41.007	ENSCJAG00000007538	MRPS16	91	45.745	Callithrix_jacchus
WBGene00018961	mrps-16	85	43.609	ENSCAFG00000031286	-	59	44.262	Canis_familiaris
WBGene00018961	mrps-16	67	40.816	ENSCAFG00000008928	-	69	40.816	Canis_familiaris
WBGene00018961	mrps-16	74	43.478	ENSCAFG00020025503	-	87	43.478	Canis_lupus_dingo
WBGene00018961	mrps-16	81	44.355	ENSCAFG00020023773	-	72	48.515	Canis_lupus_dingo
WBGene00018961	mrps-16	95	32.639	ENSCHIG00000016255	-	73	38.095	Capra_hircus
WBGene00018961	mrps-16	54	43.750	ENSTSYG00000026797	-	65	43.750	Carlito_syrichta
WBGene00018961	mrps-16	80	39.831	ENSTSYG00000036920	-	67	46.250	Carlito_syrichta
WBGene00018961	mrps-16	88	45.185	ENSTSYG00000034400	-	92	45.263	Carlito_syrichta
WBGene00018961	mrps-16	59	43.617	ENSTSYG00000014457	-	72	42.857	Carlito_syrichta
WBGene00018961	mrps-16	81	41.129	ENSCAPG00000015053	MRPS16	75	43.564	Cavia_aperea
WBGene00018961	mrps-16	81	45.161	ENSCPOG00000025500	MRPS16	72	48.515	Cavia_porcellus
WBGene00018961	mrps-16	88	42.222	ENSCCAG00000037051	MRPS16	92	45.745	Cebus_capucinus
WBGene00018961	mrps-16	87	42.188	ENSCATG00000040457	MRPS16	80	48.193	Cercocebus_atys
WBGene00018961	mrps-16	81	45.968	ENSCLAG00000010443	MRPS16	81	46.018	Chinchilla_lanigera
WBGene00018961	mrps-16	94	41.007	ENSCSAG00000018976	-	79	44.643	Chlorocebus_sabaeus
WBGene00018961	mrps-16	94	41.007	ENSCSAG00000018977	-	79	44.643	Chlorocebus_sabaeus
WBGene00018961	mrps-16	94	40.288	ENSCSAG00000000413	-	79	43.750	Chlorocebus_sabaeus
WBGene00018961	mrps-16	85	46.565	ENSCHOG00000012520	MRPS16	79	48.598	Choloepus_hoffmanni
WBGene00018961	mrps-16	82	47.967	ENSCPBG00000022282	MRPS16	87	51.282	Chrysemys_picta_bellii
WBGene00018961	mrps-16	67	47.959	ENSCING00000024826	-	53	48.421	Ciona_intestinalis
WBGene00018961	mrps-16	87	42.188	ENSCANG00000010568	MRPS16	80	48.193	Colobus_angolensis_palliatus
WBGene00018961	mrps-16	81	43.697	ENSCGRG00001023386	Mrps16	81	42.982	Cricetulus_griseus_chok1gshd
WBGene00018961	mrps-16	81	43.697	ENSCGRG00000002182	Mrps16	81	42.982	Cricetulus_griseus_crigri
WBGene00018961	mrps-16	91	42.336	ENSCSEG00000021662	mrps16	82	46.087	Cynoglossus_semilaevis
WBGene00018961	mrps-16	76	47.368	ENSCVAG00000012001	mrps16	83	47.826	Cyprinodon_variegatus
WBGene00018961	mrps-16	84	41.600	ENSDARG00000098972	mrps16	90	42.500	Danio_rerio
WBGene00018961	mrps-16	73	46.789	ENSDNOG00000047675	MRPS16	77	46.789	Dasypus_novemcinctus
WBGene00018961	mrps-16	61	44.944	ENSDORG00000023262	-	90	44.944	Dipodomys_ordii
WBGene00018961	mrps-16	81	46.400	ENSDORG00000008275	-	78	46.789	Dipodomys_ordii
WBGene00018961	mrps-16	89	43.609	FBgn0033907	mRpS16	86	46.087	Drosophila_melanogaster
WBGene00018961	mrps-16	65	43.158	ENSEBUG00000001088	mrps16	78	43.158	Eptatretus_burgeri
WBGene00018961	mrps-16	81	45.161	ENSEASG00005017192	MRPS16	73	49.505	Equus_asinus_asinus
WBGene00018961	mrps-16	81	45.161	ENSECAG00000009146	MRPS16	73	49.505	Equus_caballus
WBGene00018961	mrps-16	85	42.188	ENSELUG00000011609	mrps16	76	46.226	Esox_lucius
WBGene00018961	mrps-16	85	44.361	ENSFCAG00000037310	MRPS16	78	47.706	Felis_catus
WBGene00018961	mrps-16	87	40.625	ENSFALG00000009917	MRPS16	67	43.299	Ficedula_albicollis
WBGene00018961	mrps-16	73	45.133	ENSFDAG00000014014	MRPS16	80	45.133	Fukomys_damarensis
WBGene00018961	mrps-16	95	42.958	ENSFHEG00000022624	mrps16	81	46.957	Fundulus_heteroclitus
WBGene00018961	mrps-16	88	42.963	ENSGMOG00000001558	mrps16	80	46.729	Gadus_morhua
WBGene00018961	mrps-16	87	39.062	ENSGALG00000050621	MRPS16	76	44.444	Gallus_gallus
WBGene00018961	mrps-16	93	44.286	ENSGAFG00000012456	mrps16	81	47.826	Gambusia_affinis
WBGene00018961	mrps-16	93	41.007	ENSGACG00000001715	mrps16	82	45.217	Gasterosteus_aculeatus
WBGene00018961	mrps-16	77	47.863	ENSGAGG00000000097	-	79	47.863	Gopherus_agassizii
WBGene00018961	mrps-16	62	39.362	ENSGAGG00000005030	-	71	39.362	Gopherus_agassizii
WBGene00018961	mrps-16	87	42.969	ENSGGOG00000015055	MRPS16	71	47.525	Gorilla_gorilla
WBGene00018961	mrps-16	94	40.426	ENSHBUG00000015492	mrps16	79	45.045	Haplochromis_burtoni
WBGene00018961	mrps-16	81	47.581	ENSHGLG00000012797	MRPS16	81	47.788	Heterocephalus_glaber_female
WBGene00018961	mrps-16	81	47.581	ENSHGLG00100007890	MRPS16	81	47.788	Heterocephalus_glaber_male
WBGene00018961	mrps-16	61	48.315	ENSHCOG00000020173	mrps16	78	45.192	Hippocampus_comes
WBGene00018961	mrps-16	78	44.828	ENSIPUG00000003397	mrps16	86	44.538	Ictalurus_punctatus
WBGene00018961	mrps-16	88	44.444	ENSSTOG00000027184	MRPS16	80	46.429	Ictidomys_tridecemlineatus
WBGene00018961	mrps-16	84	42.742	ENSJJAG00000023255	Mrps16	82	43.860	Jaculus_jaculus
WBGene00018961	mrps-16	93	41.429	ENSKMAG00000009755	mrps16	85	43.443	Kryptolebias_marmoratus
WBGene00018961	mrps-16	88	45.113	ENSLBEG00000024661	mrps16	72	48.571	Labrus_bergylta
WBGene00018961	mrps-16	76	47.321	ENSLACG00000019160	MRPS16	79	47.321	Latimeria_chalumnae
WBGene00018961	mrps-16	84	46.400	ENSLOCG00000003927	mrps16	77	49.541	Lepisosteus_oculatus
WBGene00018961	mrps-16	82	44.444	ENSLAFG00000023124	MRPS16	85	44.828	Loxodonta_africana
WBGene00018961	mrps-16	87	42.188	ENSMFAG00000032103	MRPS16	71	46.535	Macaca_fascicularis
WBGene00018961	mrps-16	56	48.193	ENSMMUG00000011284	MRPS16	80	48.193	Macaca_mulatta
WBGene00018961	mrps-16	87	42.188	ENSMNEG00000041963	MRPS16	80	48.193	Macaca_nemestrina
WBGene00018961	mrps-16	87	42.188	ENSMLEG00000044343	MRPS16	80	48.193	Mandrillus_leucophaeus
WBGene00018961	mrps-16	76	45.217	ENSMAMG00000015181	mrps16	82	45.217	Mastacembelus_armatus
WBGene00018961	mrps-16	64	44.211	ENSMGAG00000000893	MRPS16	69	43.878	Meleagris_gallopavo
WBGene00018961	mrps-16	90	42.963	ENSMAUG00000010491	Mrps16	78	45.872	Mesocricetus_auratus
WBGene00018961	mrps-16	81	44.000	ENSMICG00000042573	MRPS16	81	45.614	Microcebus_murinus
WBGene00018961	mrps-16	81	46.218	ENSMOCG00000006927	Mrps16	81	46.491	Microtus_ochrogaster
WBGene00018961	mrps-16	74	49.107	ENSMMOG00000010770	mrps16	83	48.696	Mola_mola
WBGene00018961	mrps-16	84	44.444	ENSMODG00000000168	MRPS16	80	47.273	Monodelphis_domestica
WBGene00018961	mrps-16	92	38.406	ENSMALG00000007222	mrps16	79	43.478	Monopterus_albus
WBGene00018961	mrps-16	86	42.063	MGP_CAROLIEiJ_G0018987	Mrps16	81	45.614	Mus_caroli
WBGene00018961	mrps-16	62	51.648	ENSMUSG00000049960	Mrps16	72	48.515	Mus_musculus
WBGene00018961	mrps-16	62	51.648	MGP_PahariEiJ_G0030001	Mrps16	81	45.614	Mus_pahari
WBGene00018961	mrps-16	86	42.857	MGP_SPRETEiJ_G0019865	Mrps16	72	48.515	Mus_spretus
WBGene00018961	mrps-16	85	45.113	ENSMPUG00000003777	MRPS16	68	47.706	Mustela_putorius_furo
WBGene00018961	mrps-16	69	49.524	ENSMLUG00000022951	MRPS16	72	49.524	Myotis_lucifugus
WBGene00018961	mrps-16	73	44.248	ENSNGAG00000019881	Mrps16	81	44.248	Nannospalax_galili
WBGene00018961	mrps-16	94	41.135	ENSNBRG00000020914	mrps16	78	45.045	Neolamprologus_brichardi
WBGene00018961	mrps-16	87	42.969	ENSNLEG00000016597	-	80	49.398	Nomascus_leucogenys
WBGene00018961	mrps-16	87	42.188	ENSNLEG00000018904	-	71	46.535	Nomascus_leucogenys
WBGene00018961	mrps-16	82	38.843	ENSNLEG00000029922	-	77	40.741	Nomascus_leucogenys
WBGene00018961	mrps-16	73	47.273	ENSMEUG00000008644	MRPS16	87	47.273	Notamacropus_eugenii
WBGene00018961	mrps-16	81	44.538	ENSOPRG00000018616	MRPS16	84	44.737	Ochotona_princeps
WBGene00018961	mrps-16	73	46.018	ENSODEG00000019541	-	81	46.018	Octodon_degus
WBGene00018961	mrps-16	90	43.382	ENSONIG00000014282	mrps16	86	44.167	Oreochromis_niloticus
WBGene00018961	mrps-16	88	44.776	ENSOANG00000012378	MRPS16	77	48.624	Ornithorhynchus_anatinus
WBGene00018961	mrps-16	73	46.903	ENSOCUG00000024223	-	81	46.491	Oryctolagus_cuniculus
WBGene00018961	mrps-16	73	44.248	ENSOCUG00000023231	-	81	43.860	Oryctolagus_cuniculus
WBGene00018961	mrps-16	76	49.138	ENSORLG00000022084	mrps16	80	49.138	Oryzias_latipes
WBGene00018961	mrps-16	76	48.276	ENSORLG00020019793	mrps16	80	48.276	Oryzias_latipes_hni
WBGene00018961	mrps-16	76	48.276	ENSORLG00015015664	mrps16	80	48.276	Oryzias_latipes_hsok
WBGene00018961	mrps-16	94	42.553	ENSOMEG00000021490	mrps16	82	46.087	Oryzias_melastigma
WBGene00018961	mrps-16	82	45.238	ENSOGAG00000033867	MRPS16	71	49.505	Otolemur_garnettii
WBGene00018961	mrps-16	89	42.857	ENSOARG00000007548	MRPS16	68	47.706	Ovis_aries
WBGene00018961	mrps-16	87	42.969	ENSPPAG00000009406	MRPS16	71	47.525	Pan_paniscus
WBGene00018961	mrps-16	85	44.361	ENSPPRG00000024759	MRPS16	78	47.706	Panthera_pardus
WBGene00018961	mrps-16	85	44.361	ENSPTIG00000021428	MRPS16	78	47.706	Panthera_tigris_altaica
WBGene00018961	mrps-16	87	42.969	ENSPTRG00000002627	MRPS16	71	47.525	Pan_troglodytes
WBGene00018961	mrps-16	68	44.000	ENSPTRG00000044912	-	87	44.000	Pan_troglodytes
WBGene00018961	mrps-16	87	41.406	ENSPANG00000022374	MRPS16	80	46.988	Papio_anubis
WBGene00018961	mrps-16	82	47.541	ENSPKIG00000013816	mrps16	72	52.381	Paramormyrops_kingsleyae
WBGene00018961	mrps-16	78	45.378	ENSPSIG00000005589	MRPS16	81	45.378	Pelodiscus_sinensis
WBGene00018961	mrps-16	88	44.361	ENSPMGG00000013450	mrps16	89	46.667	Periophthalmus_magnuspinnatus
WBGene00018961	mrps-16	86	42.063	ENSPEMG00000021378	Mrps16	78	44.954	Peromyscus_maniculatus_bairdii
WBGene00018961	mrps-16	86	43.307	ENSPCIG00000015166	MRPS16	80	47.273	Phascolarctos_cinereus
WBGene00018961	mrps-16	89	46.269	ENSPFOG00000014130	mrps16	78	48.649	Poecilia_formosa
WBGene00018961	mrps-16	89	45.522	ENSPLAG00000018686	mrps16	78	47.748	Poecilia_latipinna
WBGene00018961	mrps-16	89	46.269	ENSPMEG00000009648	mrps16	78	48.649	Poecilia_mexicana
WBGene00018961	mrps-16	82	47.154	ENSPREG00000005800	mrps16	70	51.000	Poecilia_reticulata
WBGene00018961	mrps-16	85	42.105	ENSPCOG00000009898	MRPS16	87	44.262	Propithecus_coquereli
WBGene00018961	mrps-16	85	44.697	ENSPVAG00000012996	MRPS16	79	47.706	Pteropus_vampyrus
WBGene00018961	mrps-16	94	39.716	ENSPNYG00000018439	mrps16	79	44.144	Pundamilia_nyererei
WBGene00018961	mrps-16	90	39.552	ENSPNAG00000027291	mrps16	86	43.697	Pygocentrus_nattereri
WBGene00018961	mrps-16	86	42.063	ENSRNOG00000006898	Mrps16	72	47.525	Rattus_norvegicus
WBGene00018961	mrps-16	87	42.188	ENSRBIG00000037015	MRPS16	80	48.193	Rhinopithecus_bieti
WBGene00018961	mrps-16	87	42.188	ENSRROG00000040939	MRPS16	80	48.193	Rhinopithecus_roxellana
WBGene00018961	mrps-16	94	41.007	ENSSBOG00000016492	MRPS16	91	45.745	Saimiri_boliviensis_boliviensis
WBGene00018961	mrps-16	83	43.200	ENSSHAG00000003006	MRPS16	77	46.296	Sarcophilus_harrisii
WBGene00018961	mrps-16	66	57.143	ENSSFOG00015007264	mrps16	67	57.143	Scleropages_formosus
WBGene00018961	mrps-16	93	40.714	ENSSMAG00000014748	mrps16	82	44.348	Scophthalmus_maximus
WBGene00018961	mrps-16	94	41.135	ENSSDUG00000015177	mrps16	85	43.802	Seriola_dumerili
WBGene00018961	mrps-16	93	41.007	ENSSLDG00000004507	mrps16	85	43.802	Seriola_lalandi_dorsalis
WBGene00018961	mrps-16	87	42.857	ENSSPUG00000012312	MRPS16	72	47.115	Sphenodon_punctatus
WBGene00018961	mrps-16	90	41.176	ENSSPAG00000007520	mrps16	86	43.802	Stegastes_partitus
WBGene00018961	mrps-16	70	47.664	ENSTRUG00000021325	mrps16	86	46.552	Takifugu_rubripes
WBGene00018961	mrps-16	76	46.087	ENSTNIG00000014796	MRPS16	80	46.087	Tetraodon_nigroviridis
WBGene00018961	mrps-16	76	46.087	ENSTNIG00000006736	mrps16	80	46.087	Tetraodon_nigroviridis
WBGene00018961	mrps-16	86	43.307	ENSTTRG00000000825	MRPS16	82	45.872	Tursiops_truncatus
WBGene00018961	mrps-16	81	44.800	ENSUAMG00000005153	MRPS16	81	44.737	Ursus_americanus
WBGene00018961	mrps-16	81	44.800	ENSUMAG00000009089	MRPS16	81	44.737	Ursus_maritimus
WBGene00018961	mrps-16	81	43.697	ENSVPAG00000007263	MRPS16	76	46.535	Vicugna_pacos
WBGene00018961	mrps-16	81	44.000	ENSVVUG00000022733	-	81	44.737	Vulpes_vulpes
WBGene00018961	mrps-16	61	49.438	ENSVVUG00000005415	-	79	49.438	Vulpes_vulpes
WBGene00018961	mrps-16	91	40.580	ENSXETG00000001399	mrps16	72	48.571	Xenopus_tropicalis
WBGene00018961	mrps-16	88	45.865	ENSXCOG00000008280	mrps16	85	49.107	Xiphophorus_couchianus
WBGene00018961	mrps-16	90	44.853	ENSXMAG00000000052	mrps16	83	47.826	Xiphophorus_maculatus