EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
WBGene00018967 (Gene tree)
Gene ID
-
Gene Symbol
ddx-15
Alias
-
Full Name
Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Minus strand
Length
2683 bases
Position
chrIII:5589036-5591718
Accession
Q20875
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
F56D2DEADPF00270.296.3e-0711
F56D2DEADPF00270.296.8e-0711
F56D2HA2PF04408.232.8e-2311
F56D2HA2PF04408.233.1e-2311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
F56D2.6b-2353NM_171131F56D2.6b700 (aa)NP_741148G8JY03
F56D2.6a-2475NM_171130F56D2.6a739 (aa)NP_741147Q20875
Gene Model
Click here to download WBGene00018967's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00018967's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
WBGene00018967ddx-159136.260WBGene00015525rha-25936.260
WBGene00018967ddx-157833.275WBGene00021365smgl-25132.534
WBGene00018967ddx-159045.741WBGene00003389mog-15744.578
WBGene00018967ddx-159235.989WBGene00020263let-3558036.131
WBGene00018967ddx-159051.266WBGene00003392mog-46350.228
WBGene00018967ddx-159050.000WBGene00003393mog-55349.102
WBGene00018967ddx-159439.552WBGene00022056ddx-359039.736
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00018967ddx-159973.487ENSG00000109606DHX158575.994Homo_sapiens
WBGene00018967ddx-159377.006ENSAPOG00000020925DHX159173.314Acanthochromis_polyacanthus
WBGene00018967ddx-159476.248ENSAPOG00000018637dhx159074.891Acanthochromis_polyacanthus
WBGene00018967ddx-159973.487ENSAMEG00000010482DHX158575.994Ailuropoda_melanoleuca
WBGene00018967ddx-1510063.662ENSACIG00000021772-8966.912Amphilophus_citrinellus
WBGene00018967ddx-157078.074ENSACIG00000009701dhx159870.996Amphilophus_citrinellus
WBGene00018967ddx-159377.006ENSAOCG00000010168DHX158875.294Amphiprion_ocellaris
WBGene00018967ddx-159476.097ENSAOCG00000006690dhx159374.746Amphiprion_ocellaris
WBGene00018967ddx-159476.248ENSAPEG00000022503dhx159074.891Amphiprion_percula
WBGene00018967ddx-159377.006ENSAPEG00000016808DHX158875.294Amphiprion_percula
WBGene00018967ddx-159376.876ENSATEG00000016651dhx159275.292Anabas_testudineus
WBGene00018967ddx-159377.006ENSATEG00000017033DHX158875.294Anabas_testudineus
WBGene00018967ddx-159277.743ENSAPLG00000005889DHX159675.656Anas_platyrhynchos
WBGene00018967ddx-159276.080ENSACAG00000000412DHX159174.706Anolis_carolinensis
WBGene00018967ddx-159973.487ENSANAG00000020669DHX158675.994Aotus_nancymaae
WBGene00018967ddx-159773.971ENSACLG00000019362DHX158974.817Astatotilapia_calliptera
WBGene00018967ddx-159377.623ENSACLG00000000765dhx159971.182Astatotilapia_calliptera
WBGene00018967ddx-159377.315ENSAMXG00000002474dhx159177.042Astyanax_mexicanus
WBGene00018967ddx-159973.487ENSBTAG00000008896DHX158575.994Bos_taurus
WBGene00018967ddx-159872.590ENSCJAG00000013069DHX158575.994Callithrix_jacchus
WBGene00018967ddx-159973.487ENSCAFG00000016505DHX158575.994Canis_familiaris
WBGene00018967ddx-159973.487ENSCAFG00020027245DHX158575.994Canis_lupus_dingo
WBGene00018967ddx-159973.487ENSCHIG00000026321DHX158575.994Capra_hircus
WBGene00018967ddx-159872.590ENSTSYG00000011430DHX158676.271Carlito_syrichta
WBGene00018967ddx-158370.746ENSCAPG00000008024DHX158169.730Cavia_aperea
WBGene00018967ddx-159277.434ENSCPOG00000006467DHX158575.994Cavia_porcellus
WBGene00018967ddx-159277.434ENSCCAG00000014294DHX158675.994Cebus_capucinus
WBGene00018967ddx-159872.590ENSCATG00000000715DHX158575.994Cercocebus_atys
WBGene00018967ddx-159973.487ENSCLAG00000000508DHX158575.994Chinchilla_lanigera
WBGene00018967ddx-159872.590ENSCSAG00000016601DHX158575.994Chlorocebus_sabaeus
WBGene00018967ddx-159760.819ENSCHOG00000002751DHX157583.929Choloepus_hoffmanni
WBGene00018967ddx-159277.898ENSCPBG00000027946DHX158176.436Chrysemys_picta_bellii
WBGene00018967ddx-159346.483ENSCING00000002654-9046.481Ciona_intestinalis
WBGene00018967ddx-159872.590ENSCANG00000040147DHX158575.994Colobus_angolensis_palliatus
WBGene00018967ddx-159973.487ENSCGRG00001023527Dhx158575.994Cricetulus_griseus_chok1gshd
WBGene00018967ddx-159973.487ENSCGRG00000014616Dhx158775.994Cricetulus_griseus_crigri
WBGene00018967ddx-159376.344ENSCSEG00000006920dhx159174.633Cynoglossus_semilaevis
WBGene00018967ddx-159376.852ENSCSEG00000004353DHX158975.147Cynoglossus_semilaevis
WBGene00018967ddx-159377.160ENSCVAG00000011673DHX158975.588Cyprinodon_variegatus
WBGene00018967ddx-159377.029ENSDARG00000015392dhx158875.474Danio_rerio
WBGene00018967ddx-159277.434ENSDNOG00000014438DHX158575.994Dasypus_novemcinctus
WBGene00018967ddx-159277.434ENSDORG00000013848Dhx158575.994Dipodomys_ordii
WBGene00018967ddx-159275.309FBgn0033160Dhx159274.227Drosophila_melanogaster
WBGene00018967ddx-159971.614ENSETEG00000012706DHX158774.080Echinops_telfairi
WBGene00018967ddx-157776.067ENSEBUG00000004428dhx158575.881Eptatretus_burgeri
WBGene00018967ddx-159973.487ENSEASG00005007991DHX158575.994Equus_asinus_asinus
WBGene00018967ddx-159973.487ENSECAG00000023224DHX158575.994Equus_caballus
WBGene00018967ddx-159376.498ENSELUG00000019138DHX159076.380Esox_lucius
WBGene00018967ddx-159376.852ENSELUG00000016984dhx158975.405Esox_lucius
WBGene00018967ddx-159773.538ENSFCAG00000009234DHX158377.237Felis_catus
WBGene00018967ddx-159277.589ENSFALG00000009210DHX159975.510Ficedula_albicollis
WBGene00018967ddx-159973.487ENSFDAG00000010603DHX158575.994Fukomys_damarensis
WBGene00018967ddx-159376.380ENSFHEG00000021568DHX159074.963Fundulus_heteroclitus
WBGene00018967ddx-159275.734ENSFHEG00000021899dhx159273.932Fundulus_heteroclitus
WBGene00018967ddx-1510065.786ENSGMOG00000014578dhx159964.800Gadus_morhua
WBGene00018967ddx-159367.127ENSGMOG00000012481DHX159065.886Gadus_morhua
WBGene00018967ddx-159277.743ENSGALG00000014395DHX158876.289Gallus_gallus
WBGene00018967ddx-159376.840ENSGAFG00000005299DHX158975.146Gambusia_affinis
WBGene00018967ddx-159375.926ENSGAFG00000015491dhx159274.521Gambusia_affinis
WBGene00018967ddx-159376.389ENSGACG00000019549dhx159374.887Gasterosteus_aculeatus
WBGene00018967ddx-159277.898ENSGAGG00000010374DHX158876.436Gopherus_agassizii
WBGene00018967ddx-159973.487ENSGGOG00000016819DHX158575.994Gorilla_gorilla
WBGene00018967ddx-159774.118ENSHBUG00000008950DHX158974.963Haplochromis_burtoni
WBGene00018967ddx-159377.623ENSHBUG00000005166dhx159971.182Haplochromis_burtoni
WBGene00018967ddx-159973.487ENSHGLG00000006630DHX158575.994Heterocephalus_glaber_female
WBGene00018967ddx-159973.487ENSHGLG00100015809DHX158275.994Heterocephalus_glaber_male
WBGene00018967ddx-159866.764ENSHCOG00000000415dhx159567.994Hippocampus_comes
WBGene00018967ddx-157077.189ENSHCOG00000018653DHX158176.782Hippocampus_comes
WBGene00018967ddx-159377.623ENSIPUG00000020233dhx158876.029Ictalurus_punctatus
WBGene00018967ddx-159973.487ENSSTOG00000015000-8575.994Ictidomys_tridecemlineatus
WBGene00018967ddx-156958.025ENSSTOG00000033304-7958.025Ictidomys_tridecemlineatus
WBGene00018967ddx-159277.280ENSJJAG00000010364Dhx158575.847Jaculus_jaculus
WBGene00018967ddx-159376.852ENSKMAG00000000130DHX158975.147Kryptolebias_marmoratus
WBGene00018967ddx-159377.160ENSKMAG00000005335dhx159474.964Kryptolebias_marmoratus
WBGene00018967ddx-159376.344ENSLBEG00000022156DHX159374.854Labrus_bergylta
WBGene00018967ddx-159375.463ENSLBEG00000019620dhx159074.260Labrus_bergylta
WBGene00018967ddx-159277.589ENSLACG00000007225DHX158876.141Latimeria_chalumnae
WBGene00018967ddx-159476.391ENSLOCG00000012339dhx159970.472Lepisosteus_oculatus
WBGene00018967ddx-159277.434ENSLAFG00000005466DHX158675.994Loxodonta_africana
WBGene00018967ddx-159872.590ENSMFAG00000003532DHX158978.414Macaca_fascicularis
WBGene00018967ddx-159872.590ENSMMUG00000009637DHX158575.994Macaca_mulatta
WBGene00018967ddx-159872.590ENSMNEG00000035145DHX158575.994Macaca_nemestrina
WBGene00018967ddx-159872.590ENSMLEG00000032462DHX158575.994Mandrillus_leucophaeus
WBGene00018967ddx-159377.315ENSMAMG00000005544dhx158975.700Mastacembelus_armatus
WBGene00018967ddx-159376.852ENSMAMG00000018097DHX158975.147Mastacembelus_armatus
WBGene00018967ddx-159377.623ENSMZEG00005001757dhx159971.182Maylandia_zebra
WBGene00018967ddx-159774.118ENSMZEG00005022589DHX158974.963Maylandia_zebra
WBGene00018967ddx-159277.743ENSMGAG00000012477DHX159176.289Meleagris_gallopavo
WBGene00018967ddx-159973.487ENSMAUG00000011535Dhx158575.994Mesocricetus_auratus
WBGene00018967ddx-159277.434ENSMICG00000015414DHX158575.994Microcebus_murinus
WBGene00018967ddx-159973.487ENSMOCG00000003474Dhx158575.994Microtus_ochrogaster
WBGene00018967ddx-159474.281ENSMMOG00000006933DHX159272.727Mola_mola
WBGene00018967ddx-1510069.368ENSMMOG00000011840dhx159072.701Mola_mola
WBGene00018967ddx-159277.434ENSMODG00000000516DHX158575.994Monodelphis_domestica
WBGene00018967ddx-159376.698ENSMALG00000004667dhx158975.110Monopterus_albus
WBGene00018967ddx-159377.160ENSMALG00000003352DHX158976.651Monopterus_albus
WBGene00018967ddx-159973.487MGP_CAROLIEiJ_G0027214Dhx158575.994Mus_caroli
WBGene00018967ddx-159973.487ENSMUSG00000029169Dhx158575.994Mus_musculus
WBGene00018967ddx-159277.434MGP_PahariEiJ_G0016996Dhx158575.994Mus_pahari
WBGene00018967ddx-159973.487MGP_SPRETEiJ_G0028209Dhx158575.994Mus_spretus
WBGene00018967ddx-159973.487ENSMPUG00000016735DHX158575.994Mustela_putorius_furo
WBGene00018967ddx-159973.487ENSMLUG00000001617DHX158575.994Myotis_lucifugus
WBGene00018967ddx-159973.487ENSNGAG00000016196Dhx158575.994Nannospalax_galili
WBGene00018967ddx-159774.118ENSNBRG00000013821DHX158974.963Neolamprologus_brichardi
WBGene00018967ddx-158578.246ENSNBRG00000023387dhx158576.442Neolamprologus_brichardi
WBGene00018967ddx-159971.614ENSNLEG00000016767DHX158574.080Nomascus_leucogenys
WBGene00018967ddx-158960.417ENSMEUG00000003139DHX159959.389Notamacropus_eugenii
WBGene00018967ddx-157279.911ENSOPRG00000008696DHX156776.172Ochotona_princeps
WBGene00018967ddx-159277.434ENSODEG00000008891-8575.994Octodon_degus
WBGene00018967ddx-158956.180ENSODEG00000000387-8555.573Octodon_degus
WBGene00018967ddx-1510070.516ENSONIG00000007642dhx158875.847Oreochromis_niloticus
WBGene00018967ddx-158280.174ENSOANG00000006682DHX159878.939Ornithorhynchus_anatinus
WBGene00018967ddx-159277.434ENSOCUG00000003026DHX158575.994Oryctolagus_cuniculus
WBGene00018967ddx-159377.006ENSORLG00000004819dhx159575.700Oryzias_latipes
WBGene00018967ddx-159376.498ENSORLG00000029010DHX159074.963Oryzias_latipes
WBGene00018967ddx-159377.006ENSORLG00020014599dhx159275.700Oryzias_latipes_hni
WBGene00018967ddx-159376.498ENSORLG00020020167DHX159074.963Oryzias_latipes_hni
WBGene00018967ddx-159376.498ENSORLG00015020424DHX159970.479Oryzias_latipes_hsok
WBGene00018967ddx-159377.006ENSORLG00015012111dhx159575.700Oryzias_latipes_hsok
WBGene00018967ddx-159376.651ENSOMEG00000010067DHX158075.110Oryzias_melastigma
WBGene00018967ddx-159377.315ENSOMEG00000006075dhx159176.141Oryzias_melastigma
WBGene00018967ddx-159172.387ENSOGAG00000007593-8570.485Otolemur_garnettii
WBGene00018967ddx-159272.643ENSOGAG00000032121-8571.281Otolemur_garnettii
WBGene00018967ddx-159973.487ENSOARG00000005891DHX158575.994Ovis_aries
WBGene00018967ddx-159872.590ENSPPAG00000030385DHX158775.994Pan_paniscus
WBGene00018967ddx-159973.487ENSPPRG00000002164DHX158575.994Panthera_pardus
WBGene00018967ddx-159973.487ENSPTIG00000010037DHX158575.994Panthera_tigris_altaica
WBGene00018967ddx-159973.487ENSPTRG00000015955DHX158575.994Pan_troglodytes
WBGene00018967ddx-159872.590ENSPANG00000020685DHX158575.994Papio_anubis
WBGene00018967ddx-1510071.527ENSPKIG00000002577dhx158975.882Paramormyrops_kingsleyae
WBGene00018967ddx-159377.623ENSPKIG00000003730dhx158876.029Paramormyrops_kingsleyae
WBGene00018967ddx-159277.160ENSPSIG00000013524DHX158875.735Pelodiscus_sinensis
WBGene00018967ddx-159377.160ENSPMGG00000012520DHX159175.441Periophthalmus_magnuspinnatus
WBGene00018967ddx-159973.487ENSPEMG00000012226Dhx158575.994Peromyscus_maniculatus_bairdii
WBGene00018967ddx-159277.434ENSPCIG00000004023DHX158575.994Phascolarctos_cinereus
WBGene00018967ddx-159376.698ENSPFOG00000000949dhx159375.258Poecilia_formosa
WBGene00018967ddx-159376.687ENSPLAG00000013251DHX158975.146Poecilia_latipinna
WBGene00018967ddx-159376.543ENSPLAG00000002863dhx159275.110Poecilia_latipinna
WBGene00018967ddx-159376.687ENSPMEG00000019264DHX158975.146Poecilia_mexicana
WBGene00018967ddx-159376.380ENSPREG00000004656DHX158974.854Poecilia_reticulata
WBGene00018967ddx-159376.698ENSPREG00000019256dhx159275.258Poecilia_reticulata
WBGene00018967ddx-159973.055ENSPPYG00000014641DHX158575.552Pongo_abelii
WBGene00018967ddx-158781.994ENSPCAG00000015745DHX157879.300Procavia_capensis
WBGene00018967ddx-159271.716ENSPCOG00000016858DHX158470.839Propithecus_coquereli
WBGene00018967ddx-159973.343ENSPVAG00000013746DHX158575.847Pteropus_vampyrus
WBGene00018967ddx-159377.469ENSPNYG00000006790dhx159971.049Pundamilia_nyererei
WBGene00018967ddx-159774.118ENSPNYG00000008089DHX158974.963Pundamilia_nyererei
WBGene00018967ddx-159377.778ENSPNAG00000010321dhx158876.176Pygocentrus_nattereri
WBGene00018967ddx-159973.487ENSRNOG00000003844Dhx158575.994Rattus_norvegicus
WBGene00018967ddx-157978.125ENSRBIG00000037326DHX158373.958Rhinopithecus_bieti
WBGene00018967ddx-159872.590ENSRROG00000039130DHX158575.994Rhinopithecus_roxellana
WBGene00018967ddx-159277.434ENSSBOG00000022126DHX158675.994Saimiri_boliviensis_boliviensis
WBGene00018967ddx-159277.434ENSSHAG00000011568DHX158775.994Sarcophilus_harrisii
WBGene00018967ddx-159377.469ENSSFOG00015018549dhx158876.029Scleropages_formosus
WBGene00018967ddx-159377.160ENSSFOG00015001653dhx159175.588Scleropages_formosus
WBGene00018967ddx-159376.805ENSSMAG00000008335DHX158575.110Scophthalmus_maximus
WBGene00018967ddx-159377.315ENSSMAG00000011559dhx158875.740Scophthalmus_maximus
WBGene00018967ddx-159377.006ENSSDUG00000002650DHX158875.294Seriola_dumerili
WBGene00018967ddx-1510071.193ENSSDUG00000007372dhx158875.994Seriola_dumerili
WBGene00018967ddx-159377.006ENSSLDG00000005338DHX158975.294Seriola_lalandi_dorsalis
WBGene00018967ddx-1510071.370ENSSLDG00000006937dhx158875.994Seriola_lalandi_dorsalis
WBGene00018967ddx-157580.077ENSSARG00000006589DHX1510077.718Sorex_araneus
WBGene00018967ddx-159277.743ENSSPUG00000013533DHX158576.289Sphenodon_punctatus
WBGene00018967ddx-159377.006ENSSPAG00000020952DHX158975.294Stegastes_partitus
WBGene00018967ddx-159277.554ENSSPAG00000013664dhx159276.994Stegastes_partitus
WBGene00018967ddx-159973.487ENSSSCG00000008756DHX158575.994Sus_scrofa
WBGene00018967ddx-159277.196ENSTGUG00000009452DHX159975.145Taeniopygia_guttata
WBGene00018967ddx-159377.006ENSTRUG00000013990DHX158875.294Takifugu_rubripes
WBGene00018967ddx-159377.160ENSTNIG00000012366DHX159974.964Tetraodon_nigroviridis
WBGene00018967ddx-159267.452ENSTBEG00000001634DHX158567.158Tupaia_belangeri
WBGene00018967ddx-159973.343ENSTTRG00000011710DHX158575.847Tursiops_truncatus
WBGene00018967ddx-159973.487ENSUAMG00000020613DHX159375.994Ursus_americanus
WBGene00018967ddx-159973.487ENSUMAG00000003647DHX159375.994Ursus_maritimus
WBGene00018967ddx-158979.885ENSVPAG00000012296DHX158178.339Vicugna_pacos
WBGene00018967ddx-159973.487ENSVVUG00000013395DHX158075.994Vulpes_vulpes
WBGene00018967ddx-1510071.939ENSXETG00000002123dhx158976.289Xenopus_tropicalis
WBGene00018967ddx-159076.108ENSXCOG00000004851dhx159974.661Xiphophorus_couchianus
WBGene00018967ddx-159377.469ENSXMAG00000008425dhx159275.847Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us