EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00019168 (Gene tree)
Gene ID: -
Gene Symbol: H06I04.3
Alias: -
Full Name: Putative rRNA methyltransferase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 14746 bases
Position: chrIII:3070523-3085268
Accession: Q5CCJ2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
H06I04	FtsJ	PF01728.19	1.5e-57	1	1
H06I04	FtsJ	PF01728.19	1.8e-57	1	1
H06I04	FtsJ	PF01728.19	2e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
H06I04.3c	-	2390	NM_001027464	H06I04.3c	786 (aa)	NP_001022635	Q5CCJ2
H06I04.3b	-	2180	NM_065255	H06I04.3b	716 (aa)	NP_497656	Q5CCJ3
H06I04.3a	-	2751	NM_065254	H06I04.3a	833 (aa)	NP_497655	Q9N5N9

Gene Model

Click here to download WBGene00019168's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00019168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00019168	H06I04.3	65	50.000	ENSAPOG00000005543	ftsj3	82	44.554	Acanthochromis_polyacanthus
WBGene00019168	H06I04.3	60	48.770	ENSAMEG00000003148	FTSJ3	53	49.224	Ailuropoda_melanoleuca
WBGene00019168	H06I04.3	75	46.316	ENSACIG00000012880	ftsj3	82	46.316	Amphilophus_citrinellus
WBGene00019168	H06I04.3	62	47.425	ENSAOCG00000023196	ftsj3	99	40.423	Amphiprion_ocellaris
WBGene00019168	H06I04.3	62	46.996	ENSAPEG00000004250	ftsj3	99	40.251	Amphiprion_percula
WBGene00019168	H06I04.3	77	46.369	ENSAPLG00000010362	-	99	33.375	Anas_platyrhynchos
WBGene00019168	H06I04.3	60	48.366	ENSANAG00000033774	FTSJ3	99	40.068	Aotus_nancymaae
WBGene00019168	H06I04.3	75	48.000	ENSACLG00000019137	ftsj3	87	47.930	Astatotilapia_calliptera
WBGene00019168	H06I04.3	67	44.379	ENSAMXG00000021571	ftsj3	59	43.902	Astyanax_mexicanus
WBGene00019168	H06I04.3	100	40.026	ENSBTAG00000021060	FTSJ3	53	48.559	Bos_taurus
WBGene00019168	H06I04.3	60	47.640	ENSCJAG00000019631	FTSJ3	99	39.770	Callithrix_jacchus
WBGene00019168	H06I04.3	95	37.005	ENSTSYG00000001393	FTSJ3	98	37.226	Carlito_syrichta
WBGene00019168	H06I04.3	60	48.571	ENSCAPG00000016654	FTSJ3	75	48.444	Cavia_aperea
WBGene00019168	H06I04.3	60	47.912	ENSCCAG00000023533	-	99	40.805	Cebus_capucinus
WBGene00019168	H06I04.3	60	48.444	ENSCLAG00000003222	FTSJ3	99	40.668	Chinchilla_lanigera
WBGene00019168	H06I04.3	75	50.000	ENSCPBG00000010032	FTSJ3	82	48.206	Chrysemys_picta_bellii
WBGene00019168	H06I04.3	61	50.932	ENSCING00000025069	-	100	38.267	Ciona_intestinalis
WBGene00019168	H06I04.3	73	37.833	ENSCSAVG00000003607	-	99	36.485	Ciona_savignyi
WBGene00019168	H06I04.3	76	47.534	ENSCANG00000042921	FTSJ3	99	39.450	Colobus_angolensis_palliatus
WBGene00019168	H06I04.3	100	40.362	ENSCGRG00001018068	FTSJ3	99	40.416	Cricetulus_griseus_chok1gshd
WBGene00019168	H06I04.3	100	40.362	ENSCGRG00000010648	FTSJ3	99	40.416	Cricetulus_griseus_crigri
WBGene00019168	H06I04.3	60	44.919	ENSCSEG00000013468	ftsj3	59	44.612	Cynoglossus_semilaevis
WBGene00019168	H06I04.3	73	40.792	ENSDARG00000104938	ftsj3	99	39.588	Danio_rerio
WBGene00019168	H06I04.3	100	39.719	ENSDORG00000004200	Ftsj3	99	41.047	Dipodomys_ordii
WBGene00019168	H06I04.3	100	42.091	FBgn0030720	CG8939	99	41.183	Drosophila_melanogaster
WBGene00019168	H06I04.3	60	48.444	ENSETEG00000019228	FTSJ3	52	49.111	Echinops_telfairi
WBGene00019168	H06I04.3	100	40.604	ENSEASG00005013565	FTSJ3	93	47.921	Equus_asinus_asinus
WBGene00019168	H06I04.3	100	39.870	ENSECAG00000011995	FTSJ3	99	39.863	Equus_caballus
WBGene00019168	H06I04.3	99	39.110	ENSELUG00000013501	ftsj3	97	39.548	Esox_lucius
WBGene00019168	H06I04.3	60	49.111	ENSFCAG00000013983	FTSJ3	99	41.136	Felis_catus
WBGene00019168	H06I04.3	57	42.998	ENSFALG00000013635	FTSJ3	99	38.825	Ficedula_albicollis
WBGene00019168	H06I04.3	73	43.463	ENSFDAG00000010274	FTSJ3	99	40.951	Fukomys_damarensis
WBGene00019168	H06I04.3	66	46.901	ENSFHEG00000007639	ftsj3	99	40.000	Fundulus_heteroclitus
WBGene00019168	H06I04.3	100	38.628	ENSGAGG00000006236	FTSJ3	99	40.371	Gopherus_agassizii
WBGene00019168	H06I04.3	96	38.806	ENSHBUG00000022331	ftsj3	53	48.472	Haplochromis_burtoni
WBGene00019168	H06I04.3	100	40.154	ENSHGLG00000012282	FTSJ3	99	41.061	Heterocephalus_glaber_female
WBGene00019168	H06I04.3	100	40.154	ENSHGLG00100003578	FTSJ3	99	41.061	Heterocephalus_glaber_male
WBGene00019168	H06I04.3	74	40.609	ENSHCOG00000018770	ftsj3	99	38.600	Hippocampus_comes
WBGene00019168	H06I04.3	100	38.383	ENSIPUG00000024942	ftsj3	96	39.010	Ictalurus_punctatus
WBGene00019168	H06I04.3	60	47.368	ENSSTOG00000021265	FTSJ3	99	39.369	Ictidomys_tridecemlineatus
WBGene00019168	H06I04.3	62	47.380	ENSJJAG00000012822	Ftsj3	99	40.899	Jaculus_jaculus
WBGene00019168	H06I04.3	62	48.268	ENSKMAG00000021997	ftsj3	97	39.655	Kryptolebias_marmoratus
WBGene00019168	H06I04.3	62	46.739	ENSLBEG00000027142	ftsj3	53	47.619	Labrus_bergylta
WBGene00019168	H06I04.3	60	46.903	ENSLOCG00000008979	ftsj3	99	39.359	Lepisosteus_oculatus
WBGene00019168	H06I04.3	100	38.353	ENSLAFG00000003252	FTSJ3	99	40.323	Loxodonta_africana
WBGene00019168	H06I04.3	60	54.464	ENSMMUG00000016768	FTSJ3	76	48.222	Macaca_mulatta
WBGene00019168	H06I04.3	64	54.464	ENSMNEG00000029254	FTSJ3	99	39.245	Macaca_nemestrina
WBGene00019168	H06I04.3	62	46.137	ENSMZEG00005001992	ftsj3	98	40.319	Maylandia_zebra
WBGene00019168	H06I04.3	81	42.974	ENSMGAG00000000953	FTSJ3	72	46.522	Meleagris_gallopavo
WBGene00019168	H06I04.3	100	40.442	ENSMAUG00000015688	Ftsj3	99	40.139	Mesocricetus_auratus
WBGene00019168	H06I04.3	62	47.609	ENSMICG00000045996	FTSJ3	99	40.607	Microcebus_murinus
WBGene00019168	H06I04.3	100	41.612	ENSMOCG00000017809	Ftsj3	99	41.327	Microtus_ochrogaster
WBGene00019168	H06I04.3	64	50.997	ENSMMOG00000019522	ftsj3	70	45.455	Mola_mola
WBGene00019168	H06I04.3	100	39.276	ENSMODG00000009901	FTSJ3	99	39.150	Monodelphis_domestica
WBGene00019168	H06I04.3	100	40.880	MGP_CAROLIEiJ_G0017315	Ftsj3	99	41.076	Mus_caroli
WBGene00019168	H06I04.3	100	41.069	ENSMUSG00000020706	Ftsj3	99	41.029	Mus_musculus
WBGene00019168	H06I04.3	100	40.597	MGP_PahariEiJ_G0018445	Ftsj3	99	40.982	Mus_pahari
WBGene00019168	H06I04.3	100	41.009	MGP_SPRETEiJ_G0018159	Ftsj3	99	41.076	Mus_spretus
WBGene00019168	H06I04.3	60	47.826	ENSMPUG00000014911	FTSJ3	99	41.074	Mustela_putorius_furo
WBGene00019168	H06I04.3	60	48.780	ENSMLUG00000011667	FTSJ3	65	43.850	Myotis_lucifugus
WBGene00019168	H06I04.3	71	42.780	ENSNGAG00000005899	Ftsj3	99	40.249	Nannospalax_galili
WBGene00019168	H06I04.3	75	50.000	ENSNBRG00000017453	ftsj3	89	47.930	Neolamprologus_brichardi
WBGene00019168	H06I04.3	64	54.464	ENSNLEG00000004188	FTSJ3	76	48.148	Nomascus_leucogenys
WBGene00019168	H06I04.3	58	44.213	ENSMEUG00000013252	FTSJ3	99	36.854	Notamacropus_eugenii
WBGene00019168	H06I04.3	100	39.079	ENSOPRG00000014985	FTSJ3	99	40.578	Ochotona_princeps
WBGene00019168	H06I04.3	62	46.567	ENSONIG00000001654	ftsj3	53	48.913	Oreochromis_niloticus
WBGene00019168	H06I04.3	100	41.215	ENSOCUG00000004319	FTSJ3	99	41.512	Oryctolagus_cuniculus
WBGene00019168	H06I04.3	60	46.916	ENSORLG00000005910	ftsj3	52	47.461	Oryzias_latipes
WBGene00019168	H06I04.3	75	46.696	ENSORLG00020021255	ftsj3	81	47.111	Oryzias_latipes_hni
WBGene00019168	H06I04.3	60	47.682	ENSORLG00015018416	ftsj3	52	48.230	Oryzias_latipes_hsok
WBGene00019168	H06I04.3	78	45.263	ENSOMEG00000014432	ftsj3	99	39.616	Oryzias_melastigma
WBGene00019168	H06I04.3	60	48.770	ENSOGAG00000032479	FTSJ3	99	40.163	Otolemur_garnettii
WBGene00019168	H06I04.3	100	39.662	ENSOARG00000013637	FTSJ3	53	49.111	Ovis_aries
WBGene00019168	H06I04.3	60	49.111	ENSPPRG00000003042	FTSJ3	99	40.413	Panthera_pardus
WBGene00019168	H06I04.3	60	48.571	ENSPTIG00000012576	FTSJ3	99	40.586	Panthera_tigris_altaica
WBGene00019168	H06I04.3	100	38.281	ENSPKIG00000012838	ftsj3	98	39.125	Paramormyrops_kingsleyae
WBGene00019168	H06I04.3	73	42.941	ENSPMGG00000012959	ftsj3	66	45.401	Periophthalmus_magnuspinnatus
WBGene00019168	H06I04.3	100	41.441	ENSPEMG00000000248	Ftsj3	99	40.438	Peromyscus_maniculatus_bairdii
WBGene00019168	H06I04.3	100	39.666	ENSPPYG00000008532	FTSJ3	99	39.864	Pongo_abelii
WBGene00019168	H06I04.3	100	39.249	ENSPCAG00000002560	FTSJ3	99	39.907	Procavia_capensis
WBGene00019168	H06I04.3	100	39.267	ENSPCOG00000023921	FTSJ3	99	40.257	Propithecus_coquereli
WBGene00019168	H06I04.3	73	42.004	ENSPVAG00000000162	FTSJ3	99	40.279	Pteropus_vampyrus
WBGene00019168	H06I04.3	75	49.000	ENSPNYG00000005108	ftsj3	87	47.930	Pundamilia_nyererei
WBGene00019168	H06I04.3	97	37.157	ENSPNAG00000022474	ftsj3	96	38.732	Pygocentrus_nattereri
WBGene00019168	H06I04.3	100	39.844	ENSRNOG00000009857	Ftsj3	99	40.672	Rattus_norvegicus
WBGene00019168	H06I04.3	59	43.409	YCL054W	-	99	35.206	Saccharomyces_cerevisiae
WBGene00019168	H06I04.3	60	48.366	ENSSBOG00000031794	FTSJ3	92	40.343	Saimiri_boliviensis_boliviensis
WBGene00019168	H06I04.3	62	47.289	ENSSHAG00000013062	FTSJ3	99	39.745	Sarcophilus_harrisii
WBGene00019168	H06I04.3	72	40.463	ENSSFOG00015018053	ftsj3	99	37.844	Scleropages_formosus
WBGene00019168	H06I04.3	66	46.029	ENSSDUG00000003385	ftsj3	98	39.819	Seriola_dumerili
WBGene00019168	H06I04.3	66	45.825	ENSSLDG00000017970	ftsj3	98	39.432	Seriola_lalandi_dorsalis
WBGene00019168	H06I04.3	100	40.026	ENSSPUG00000012959	FTSJ3	100	39.950	Sphenodon_punctatus
WBGene00019168	H06I04.3	62	47.826	ENSSSCG00000017288	FTSJ3	99	40.276	Sus_scrofa
WBGene00019168	H06I04.3	77	46.998	ENSTRUG00000017550	ftsj3	79	48.879	Takifugu_rubripes
WBGene00019168	H06I04.3	60	49.436	ENSTNIG00000015549	ftsj3	53	49.436	Tetraodon_nigroviridis
WBGene00019168	H06I04.3	99	37.055	ENSTBEG00000010295	FTSJ3	99	37.835	Tupaia_belangeri
WBGene00019168	H06I04.3	60	48.565	ENSTTRG00000006973	FTSJ3	99	40.621	Tursiops_truncatus
WBGene00019168	H06I04.3	97	36.702	ENSXETG00000006939	ftsj3	74	43.779	Xenopus_tropicalis