EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00019219 (Gene tree)
Gene ID: -
Gene Symbol: H20J04.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 5462 bases
Position: chrII:4329023-4334484
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
H20J04	ResIII	PF04851.15	6.4e-06	1	1
H20J04	ResIII	PF04851.15	7.3e-06	1	1
H20J04	ResIII	PF04851.15	7.3e-06	1	1
H20J04	DEAD	PF00270.29	9.3e-47	1	1
H20J04	DEAD	PF00270.29	9.3e-47	1	1
H20J04	DEAD	PF00270.29	1.7e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
H20J04.4b.1	-	2051	NM_001047324	H20J04.4b.1	561 (aa)	NP_001040789	Q2WF63
H20J04.4a	-	1476	NM_001047323	H20J04.4a	488 (aa)	NP_001040788	Q9N5M1
H20J04.4b.2	-	1912	NM_001047324	H20J04.4b.2	561 (aa)	NP_001040789	Q2WF63

Gene Model

Click here to download WBGene00019219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00019219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00019219	H20J04.4	81	43.511	WBGene00012059	T26G10.1	84	42.180
WBGene00019219	H20J04.4	75	31.436	WBGene00017162	ddx-23	54	31.188
WBGene00019219	H20J04.4	73	33.154	WBGene00019245	sacy-1	57	33.422
WBGene00019219	H20J04.4	74	32.044	WBGene00000479	cgh-1	81	32.123
WBGene00019219	H20J04.4	74	31.250	WBGene00010260	ddx-17	64	31.522
WBGene00019219	H20J04.4	91	30.149	WBGene00006888	vbh-1	66	31.364
WBGene00019219	H20J04.4	71	36.261	WBGene00021277	Y23H5B.6	50	35.185
WBGene00019219	H20J04.4	72	30.641	WBGene00015232	B0511.6	65	31.198
WBGene00019219	H20J04.4	81	31.159	WBGene00002244	laf-1	61	31.204
WBGene00019219	H20J04.4	72	33.807	WBGene00002083	inf-1	85	33.807
WBGene00019219	H20J04.4	70	32.216	WBGene00018890	F55F8.2	51	32.908
WBGene00019219	H20J04.4	73	40.678	WBGene00021938	Y55F3BR.1	55	40.678
WBGene00019219	H20J04.4	77	30.263	WBGene00013983	ZK512.2	65	30.263
WBGene00019219	H20J04.4	82	32.836	WBGene00022029	Y65B4A.6	99	32.639
WBGene00019219	H20J04.4	85	30.751	WBGene00018776	F53H1.1	55	31.148
WBGene00019219	H20J04.4	73	30.194	WBGene00001840	hel-1	82	30.194
WBGene00019219	H20J04.4	74	38.211	WBGene00022148	ddx-27	52	37.629
WBGene00019219	H20J04.4	79	33.077	WBGene00018007	F33D11.10	94	33.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00019219	H20J04.4	81	50.000	ENSG00000105671	DDX49	93	50.000	Homo_sapiens
WBGene00019219	H20J04.4	77	50.114	ENSAPOG00000010961	ddx49	92	49.333	Acanthochromis_polyacanthus
WBGene00019219	H20J04.4	80	50.664	ENSAMEG00000011566	DDX49	93	50.664	Ailuropoda_melanoleuca
WBGene00019219	H20J04.4	77	50.682	ENSACIG00000011029	ddx49	96	49.353	Amphilophus_citrinellus
WBGene00019219	H20J04.4	77	49.886	ENSAOCG00000006257	ddx49	92	49.111	Amphiprion_ocellaris
WBGene00019219	H20J04.4	79	49.220	ENSAPEG00000006367	ddx49	92	49.220	Amphiprion_percula
WBGene00019219	H20J04.4	80	48.246	ENSATEG00000016661	ddx49	94	48.246	Anabas_testudineus
WBGene00019219	H20J04.4	71	45.735	ENSAPLG00000008420	DDX49	95	46.898	Anas_platyrhynchos
WBGene00019219	H20J04.4	81	50.435	ENSANAG00000031415	DDX49	94	50.435	Aotus_nancymaae
WBGene00019219	H20J04.4	77	50.455	ENSACLG00000022538	ddx49	99	50.711	Astatotilapia_calliptera
WBGene00019219	H20J04.4	77	50.923	ENSAMXG00000016919	ddx49	93	49.103	Astyanax_mexicanus
WBGene00019219	H20J04.4	81	50.000	ENSBTAG00000000811	DDX49	92	65.385	Bos_taurus
WBGene00019219	H20J04.4	81	50.435	ENSCJAG00000042114	DDX49	94	50.435	Callithrix_jacchus
WBGene00019219	H20J04.4	81	50.000	ENSCAFG00000014512	DDX49	92	50.000	Canis_familiaris
WBGene00019219	H20J04.4	81	50.000	ENSCAFG00020012375	DDX49	70	50.000	Canis_lupus_dingo
WBGene00019219	H20J04.4	81	49.782	ENSCHIG00000019910	DDX49	93	49.782	Capra_hircus
WBGene00019219	H20J04.4	81	49.782	ENSTSYG00000028117	DDX49	95	49.782	Carlito_syrichta
WBGene00019219	H20J04.4	75	49.649	ENSCAPG00000012222	DDX49	91	49.649	Cavia_aperea
WBGene00019219	H20J04.4	81	49.783	ENSCPOG00000013626	DDX49	94	49.783	Cavia_porcellus
WBGene00019219	H20J04.4	81	50.435	ENSCCAG00000036092	DDX49	93	50.435	Cebus_capucinus
WBGene00019219	H20J04.4	81	50.000	ENSCATG00000032577	DDX49	93	50.000	Cercocebus_atys
WBGene00019219	H20J04.4	81	49.782	ENSCLAG00000012844	DDX49	95	49.782	Chinchilla_lanigera
WBGene00019219	H20J04.4	81	47.817	ENSCSAG00000005251	DDX49	93	47.817	Chlorocebus_sabaeus
WBGene00019219	H20J04.4	84	48.632	ENSCPBG00000012500	DDX49	95	49.351	Chrysemys_picta_bellii
WBGene00019219	H20J04.4	79	49.667	ENSCING00000008831	-	98	49.667	Ciona_intestinalis
WBGene00019219	H20J04.4	77	48.413	ENSCSAVG00000000522	-	98	48.104	Ciona_savignyi
WBGene00019219	H20J04.4	81	47.380	ENSCANG00000030901	DDX49	93	47.380	Colobus_angolensis_palliatus
WBGene00019219	H20J04.4	81	50.976	ENSCGRG00001009467	Ddx49	94	50.976	Cricetulus_griseus_chok1gshd
WBGene00019219	H20J04.4	81	50.976	ENSCGRG00000011487	Ddx49	94	50.976	Cricetulus_griseus_crigri
WBGene00019219	H20J04.4	82	48.276	ENSCSEG00000016139	ddx49	94	48.276	Cynoglossus_semilaevis
WBGene00019219	H20J04.4	77	49.318	ENSCVAG00000010466	ddx49	92	49.095	Cyprinodon_variegatus
WBGene00019219	H20J04.4	80	48.889	ENSDARG00000012899	ddx49	93	48.786	Danio_rerio
WBGene00019219	H20J04.4	77	51.715	ENSDORG00000004301	Ddx49	87	50.877	Dipodomys_ordii
WBGene00019219	H20J04.4	76	43.883	FBgn0010220	Dbp45A	81	42.326	Drosophila_melanogaster
WBGene00019219	H20J04.4	81	50.655	ENSEASG00005006560	DDX49	93	50.655	Equus_asinus_asinus
WBGene00019219	H20J04.4	81	50.655	ENSECAG00000012194	DDX49	92	63.366	Equus_caballus
WBGene00019219	H20J04.4	82	49.784	ENSELUG00000012963	ddx49	92	49.892	Esox_lucius
WBGene00019219	H20J04.4	80	50.442	ENSFCAG00000009760	DDX49	93	50.442	Felis_catus
WBGene00019219	H20J04.4	81	49.563	ENSFDAG00000011064	DDX49	95	49.563	Fukomys_damarensis
WBGene00019219	H20J04.4	77	50.132	ENSGMOG00000007556	ddx49	92	49.770	Gadus_morhua
WBGene00019219	H20J04.4	84	47.468	ENSGALG00000003130	DDX49	98	50.376	Gallus_gallus
WBGene00019219	H20J04.4	82	46.822	ENSGAFG00000004779	ddx49	97	46.983	Gambusia_affinis
WBGene00019219	H20J04.4	78	49.431	ENSGACG00000008047	ddx49	98	49.412	Gasterosteus_aculeatus
WBGene00019219	H20J04.4	83	48.718	ENSGAGG00000022213	DDX49	90	51.152	Gopherus_agassizii
WBGene00019219	H20J04.4	77	51.979	ENSGGOG00000037966	DDX49	93	49.782	Gorilla_gorilla
WBGene00019219	H20J04.4	77	50.455	ENSHBUG00000008991	ddx49	95	49.342	Haplochromis_burtoni
WBGene00019219	H20J04.4	81	49.673	ENSHGLG00000006789	DDX49	96	49.673	Heterocephalus_glaber_female
WBGene00019219	H20J04.4	81	47.930	ENSHGLG00100006283	DDX49	96	47.930	Heterocephalus_glaber_male
WBGene00019219	H20J04.4	80	49.342	ENSHCOG00000008961	ddx49	95	49.342	Hippocampus_comes
WBGene00019219	H20J04.4	80	49.119	ENSIPUG00000005386	ddx49	93	49.339	Ictalurus_punctatus
WBGene00019219	H20J04.4	81	49.782	ENSSTOG00000006749	DDX49	93	49.782	Ictidomys_tridecemlineatus
WBGene00019219	H20J04.4	80	49.123	ENSKMAG00000004909	ddx49	94	49.123	Kryptolebias_marmoratus
WBGene00019219	H20J04.4	83	48.632	ENSLBEG00000027804	ddx49	96	49.138	Labrus_bergylta
WBGene00019219	H20J04.4	77	50.396	ENSLACG00000008244	DDX49	94	49.127	Latimeria_chalumnae
WBGene00019219	H20J04.4	77	51.715	ENSLOCG00000002119	ddx49	90	50.682	Lepisosteus_oculatus
WBGene00019219	H20J04.4	81	50.437	ENSLAFG00000002934	DDX49	94	50.437	Loxodonta_africana
WBGene00019219	H20J04.4	81	50.000	ENSMFAG00000044697	DDX49	93	50.000	Macaca_fascicularis
WBGene00019219	H20J04.4	81	50.000	ENSMMUG00000023293	DDX49	93	50.000	Macaca_mulatta
WBGene00019219	H20J04.4	81	50.000	ENSMNEG00000029654	DDX49	93	50.000	Macaca_nemestrina
WBGene00019219	H20J04.4	81	47.162	ENSMLEG00000042550	DDX49	93	47.162	Mandrillus_leucophaeus
WBGene00019219	H20J04.4	80	48.684	ENSMAMG00000006297	ddx49	96	48.491	Mastacembelus_armatus
WBGene00019219	H20J04.4	77	50.455	ENSMZEG00005016366	ddx49	95	49.342	Maylandia_zebra
WBGene00019219	H20J04.4	84	47.579	ENSMGAG00000004605	DDX49	98	49.123	Meleagris_gallopavo
WBGene00019219	H20J04.4	82	51.188	ENSMAUG00000010235	Ddx49	96	51.082	Mesocricetus_auratus
WBGene00019219	H20J04.4	63	57.862	ENSMICG00000003640	DDX49	86	57.862	Microcebus_murinus
WBGene00019219	H20J04.4	81	50.435	ENSMOCG00000018690	Ddx49	95	50.435	Microtus_ochrogaster
WBGene00019219	H20J04.4	82	48.305	ENSMMOG00000007532	ddx49	97	48.707	Mola_mola
WBGene00019219	H20J04.4	78	50.909	ENSMODG00000003745	DDX49	89	50.567	Monodelphis_domestica
WBGene00019219	H20J04.4	83	48.312	ENSMALG00000018053	ddx49	97	48.707	Monopterus_albus
WBGene00019219	H20J04.4	81	49.348	MGP_CAROLIEiJ_G0031139	Ddx49	94	49.348	Mus_caroli
WBGene00019219	H20J04.4	81	49.565	ENSMUSG00000057788	Ddx49	94	49.565	Mus_musculus
WBGene00019219	H20J04.4	81	50.217	MGP_PahariEiJ_G0021604	Ddx49	94	49.783	Mus_pahari
WBGene00019219	H20J04.4	80	50.330	MGP_SPRETEiJ_G0032257	Ddx49	93	50.330	Mus_spretus
WBGene00019219	H20J04.4	77	52.243	ENSMPUG00000015485	DDX49	89	51.843	Mustela_putorius_furo
WBGene00019219	H20J04.4	77	51.852	ENSMLUG00000012159	DDX49	89	51.382	Myotis_lucifugus
WBGene00019219	H20J04.4	83	48.504	ENSNGAG00000019673	Ddx49	93	50.111	Nannospalax_galili
WBGene00019219	H20J04.4	77	50.923	ENSNBRG00000022025	ddx49	95	49.781	Neolamprologus_brichardi
WBGene00019219	H20J04.4	81	50.000	ENSNLEG00000006136	DDX49	93	50.000	Nomascus_leucogenys
WBGene00019219	H20J04.4	78	51.364	ENSMEUG00000011888	DDX49	98	51.364	Notamacropus_eugenii
WBGene00019219	H20J04.4	81	49.130	ENSOPRG00000003824	DDX49	96	49.130	Ochotona_princeps
WBGene00019219	H20J04.4	81	50.218	ENSODEG00000011203	DDX49	92	50.218	Octodon_degus
WBGene00019219	H20J04.4	77	51.058	ENSONIG00000012731	ddx49	95	49.561	Oreochromis_niloticus
WBGene00019219	H20J04.4	77	49.770	ENSORLG00000008509	ddx49	93	49.318	Oryzias_latipes
WBGene00019219	H20J04.4	77	49.770	ENSORLG00020014661	ddx49	97	48.261	Oryzias_latipes_hni
WBGene00019219	H20J04.4	81	48.261	ENSORLG00015010071	ddx49	97	48.261	Oryzias_latipes_hsok
WBGene00019219	H20J04.4	77	49.868	ENSOMEG00000003733	ddx49	97	48.043	Oryzias_melastigma
WBGene00019219	H20J04.4	81	50.218	ENSOGAG00000008259	DDX49	93	50.218	Otolemur_garnettii
WBGene00019219	H20J04.4	81	49.130	ENSOARG00000010119	-	93	49.130	Ovis_aries
WBGene00019219	H20J04.4	81	50.000	ENSPPAG00000035217	DDX49	93	50.000	Pan_paniscus
WBGene00019219	H20J04.4	80	50.442	ENSPPRG00000013274	DDX49	93	50.442	Panthera_pardus
WBGene00019219	H20J04.4	80	50.442	ENSPTIG00000011259	DDX49	93	50.442	Panthera_tigris_altaica
WBGene00019219	H20J04.4	81	50.000	ENSPTRG00000010725	DDX49	93	50.000	Pan_troglodytes
WBGene00019219	H20J04.4	81	50.218	ENSPANG00000003161	DDX49	93	50.218	Papio_anubis
WBGene00019219	H20J04.4	83	49.257	ENSPKIG00000006013	ddx49	94	49.782	Paramormyrops_kingsleyae
WBGene00019219	H20J04.4	76	46.667	ENSPSIG00000008625	DDX49	90	48.872	Pelodiscus_sinensis
WBGene00019219	H20J04.4	71	50.868	ENSPMGG00000017693	ddx49	94	49.415	Periophthalmus_magnuspinnatus
WBGene00019219	H20J04.4	81	50.652	ENSPEMG00000009238	Ddx49	96	50.652	Peromyscus_maniculatus_bairdii
WBGene00019219	H20J04.4	76	50.660	ENSPMAG00000001195	ddx49	99	47.957	Petromyzon_marinus
WBGene00019219	H20J04.4	81	49.782	ENSPCIG00000001050	DDX49	87	49.782	Phascolarctos_cinereus
WBGene00019219	H20J04.4	78	48.747	ENSPFOG00000000870	ddx49	91	48.747	Poecilia_formosa
WBGene00019219	H20J04.4	78	48.747	ENSPLAG00000016185	ddx49	91	48.747	Poecilia_latipinna
WBGene00019219	H20J04.4	78	48.747	ENSPMEG00000016243	ddx49	97	47.629	Poecilia_mexicana
WBGene00019219	H20J04.4	78	48.519	ENSPREG00000011214	ddx49	97	47.414	Poecilia_reticulata
WBGene00019219	H20J04.4	81	50.000	ENSPPYG00000009755	DDX49	93	50.000	Pongo_abelii
WBGene00019219	H20J04.4	81	50.218	ENSPCAG00000002310	DDX49	94	50.218	Procavia_capensis
WBGene00019219	H20J04.4	77	52.243	ENSPCOG00000024973	DDX49	90	51.843	Propithecus_coquereli
WBGene00019219	H20J04.4	82	47.403	ENSPVAG00000015468	DDX49	89	49.539	Pteropus_vampyrus
WBGene00019219	H20J04.4	80	50.000	ENSPNYG00000016672	ddx49	96	50.000	Pundamilia_nyererei
WBGene00019219	H20J04.4	77	50.526	ENSPNAG00000003429	ddx49	94	48.458	Pygocentrus_nattereri
WBGene00019219	H20J04.4	77	52.507	ENSRNOG00000022368	Ddx49	89	51.843	Rattus_norvegicus
WBGene00019219	H20J04.4	81	50.000	ENSRBIG00000030758	DDX49	93	50.000	Rhinopithecus_bieti
WBGene00019219	H20J04.4	81	50.000	ENSRROG00000032460	DDX49	93	50.000	Rhinopithecus_roxellana
WBGene00019219	H20J04.4	80	44.750	YHR169W	-	97	44.076	Saccharomyces_cerevisiae
WBGene00019219	H20J04.4	81	50.437	ENSSBOG00000035812	DDX49	92	52.370	Saimiri_boliviensis_boliviensis
WBGene00019219	H20J04.4	78	50.682	ENSSHAG00000010982	DDX49	85	50.682	Sarcophilus_harrisii
WBGene00019219	H20J04.4	81	47.722	ENSSFOG00015021150	ddx49	95	47.722	Scleropages_formosus
WBGene00019219	H20J04.4	82	48.822	ENSSMAG00000021016	ddx49	96	48.922	Scophthalmus_maximus
WBGene00019219	H20J04.4	81	49.345	ENSSDUG00000009696	ddx49	92	49.345	Seriola_dumerili
WBGene00019219	H20J04.4	82	49.036	ENSSLDG00000006958	ddx49	95	49.345	Seriola_lalandi_dorsalis
WBGene00019219	H20J04.4	58	50.000	ENSSARG00000003669	DDX49	99	50.000	Sorex_araneus
WBGene00019219	H20J04.4	79	49.552	ENSSPUG00000010688	DDX49	92	49.552	Sphenodon_punctatus
WBGene00019219	H20J04.4	81	48.812	ENSSPAG00000011486	ddx49	96	48.812	Stegastes_partitus
WBGene00019219	H20J04.4	81	49.782	ENSSSCG00000025329	DDX49	95	49.782	Sus_scrofa
WBGene00019219	H20J04.4	80	49.448	ENSTRUG00000021524	ddx49	95	49.138	Takifugu_rubripes
WBGene00019219	H20J04.4	80	48.690	ENSTNIG00000010188	ddx49	95	48.283	Tetraodon_nigroviridis
WBGene00019219	H20J04.4	54	57.297	ENSTBEG00000005967	-	55	57.297	Tupaia_belangeri
WBGene00019219	H20J04.4	81	46.507	ENSTTRG00000003818	DDX49	93	46.507	Tursiops_truncatus
WBGene00019219	H20J04.4	81	50.000	ENSUAMG00000007088	DDX49	91	50.000	Ursus_americanus
WBGene00019219	H20J04.4	77	52.507	ENSUMAG00000006489	DDX49	89	52.133	Ursus_maritimus
WBGene00019219	H20J04.4	80	50.442	ENSVVUG00000007767	DDX49	89	50.442	Vulpes_vulpes
WBGene00019219	H20J04.4	77	52.368	ENSXETG00000010135	ddx49	96	49.786	Xenopus_tropicalis
WBGene00019219	H20J04.4	64	47.383	ENSXCOG00000005756	ddx49	89	46.134	Xiphophorus_couchianus
WBGene00019219	H20J04.4	78	48.519	ENSXMAG00000002554	ddx49	97	47.414	Xiphophorus_maculatus