EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00019275 (Gene tree)
Gene ID: -
Gene Symbol: rpac-40
Alias: -
Full Name: RNA Polymerase I/III (A/C) shared subunit
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 4212 bases
Position: chrV:4199485-4203696
Accession: Q9UAY9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
H43I07	RNA_pol_A_bac	PF01000.26	1.2e-29	1	1
H43I07	RNA_pol_L	PF01193.24	8.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
H43I07.2	-	1244	NM_071765	H43I07.2	366 (aa)	NP_504166	Q9UAY9

Gene Model

Click here to download WBGene00019275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00019275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00019275	rpac-40	94	46.459	ENSG00000171453	POLR1C	99	49.834	Homo_sapiens
WBGene00019275	rpac-40	92	47.041	ENSAPOG00000024356	polr1c	92	47.633	Acanthochromis_polyacanthus
WBGene00019275	rpac-40	99	45.822	ENSAMEG00000012205	POLR1C	99	45.822	Ailuropoda_melanoleuca
WBGene00019275	rpac-40	87	42.320	ENSACIG00000016268	polr1c	87	42.947	Amphilophus_citrinellus
WBGene00019275	rpac-40	98	45.179	ENSAOCG00000011687	polr1c	96	45.730	Amphiprion_ocellaris
WBGene00019275	rpac-40	92	46.154	ENSAPEG00000002433	polr1c	92	46.746	Amphiprion_percula
WBGene00019275	rpac-40	90	47.576	ENSATEG00000005985	polr1c	90	47.879	Anabas_testudineus
WBGene00019275	rpac-40	81	49.832	ENSAPLG00000002908	POLR1C	99	48.718	Anas_platyrhynchos
WBGene00019275	rpac-40	88	46.364	ENSACAG00000009764	POLR1C	89	46.364	Anolis_carolinensis
WBGene00019275	rpac-40	55	30.769	ENSACAG00000011302	-	80	30.769	Anolis_carolinensis
WBGene00019275	rpac-40	94	45.609	ENSANAG00000025805	POLR1C	96	45.609	Aotus_nancymaae
WBGene00019275	rpac-40	92	45.858	ENSACLG00000006573	polr1c	92	46.291	Astatotilapia_calliptera
WBGene00019275	rpac-40	57	30.144	ENSACLG00000004854	polr2c	79	30.144	Astatotilapia_calliptera
WBGene00019275	rpac-40	94	45.042	ENSAMXG00000012062	polr1c	96	45.042	Astyanax_mexicanus
WBGene00019275	rpac-40	94	47.309	ENSBTAG00000018969	POLR1C	97	47.309	Bos_taurus
WBGene00019275	rpac-40	94	45.609	ENSCJAG00000005594	POLR1C	97	45.609	Callithrix_jacchus
WBGene00019275	rpac-40	94	47.309	ENSCAFG00000001872	POLR1C	97	47.309	Canis_familiaris
WBGene00019275	rpac-40	63	30.736	ENSCAFG00020007660	POLR2C	62	30.736	Canis_lupus_dingo
WBGene00019275	rpac-40	94	47.309	ENSCAFG00020012018	POLR1C	97	47.309	Canis_lupus_dingo
WBGene00019275	rpac-40	94	47.309	ENSCHIG00000004352	POLR1C	97	47.309	Capra_hircus
WBGene00019275	rpac-40	99	45.430	ENSTSYG00000011921	POLR1C	99	45.430	Carlito_syrichta
WBGene00019275	rpac-40	82	50.831	ENSCAPG00000015364	POLR1C	84	50.831	Cavia_aperea
WBGene00019275	rpac-40	94	47.309	ENSCPOG00000038098	POLR1C	97	47.309	Cavia_porcellus
WBGene00019275	rpac-40	94	45.892	ENSCCAG00000020169	POLR1C	97	45.892	Cebus_capucinus
WBGene00019275	rpac-40	94	46.742	ENSCATG00000044045	POLR1C	97	46.742	Cercocebus_atys
WBGene00019275	rpac-40	94	47.309	ENSCLAG00000009266	POLR1C	97	47.309	Chinchilla_lanigera
WBGene00019275	rpac-40	94	47.025	ENSCSAG00000011913	POLR1C	97	47.025	Chlorocebus_sabaeus
WBGene00019275	rpac-40	57	50.962	ENSCHOG00000006601	POLR1C	98	50.962	Choloepus_hoffmanni
WBGene00019275	rpac-40	94	46.761	ENSCPBG00000025203	POLR1C	97	46.761	Chrysemys_picta_bellii
WBGene00019275	rpac-40	94	45.245	ENSCING00000003563	-	94	45.245	Ciona_intestinalis
WBGene00019275	rpac-40	94	46.176	ENSCANG00000043167	POLR1C	97	46.176	Colobus_angolensis_palliatus
WBGene00019275	rpac-40	94	47.324	ENSCGRG00001017533	Polr1c	97	47.324	Cricetulus_griseus_chok1gshd
WBGene00019275	rpac-40	82	50.825	ENSCGRG00000013225	Polr1c	96	50.825	Cricetulus_griseus_crigri
WBGene00019275	rpac-40	94	44.318	ENSCSEG00000018097	polr1c	96	44.318	Cynoglossus_semilaevis
WBGene00019275	rpac-40	56	50.244	ENSCVAG00000005684	polr1c	86	48.611	Cyprinodon_variegatus
WBGene00019275	rpac-40	57	30.622	ENSCVAG00000017931	polr2c	75	30.622	Cyprinodon_variegatus
WBGene00019275	rpac-40	99	45.257	ENSDARG00000039400	polr1c	97	45.257	Danio_rerio
WBGene00019275	rpac-40	94	47.592	ENSDNOG00000042693	POLR1C	97	47.592	Dasypus_novemcinctus
WBGene00019275	rpac-40	94	46.176	ENSDORG00000000429	Polr1c	97	46.176	Dipodomys_ordii
WBGene00019275	rpac-40	90	45.897	FBgn0031657	CG3756	93	45.897	Drosophila_melanogaster
WBGene00019275	rpac-40	94	45.609	ENSETEG00000010807	POLR1C	97	45.609	Echinops_telfairi
WBGene00019275	rpac-40	90	48.024	ENSEBUG00000013725	polr1c	87	51.351	Eptatretus_burgeri
WBGene00019275	rpac-40	94	47.309	ENSEASG00005003338	POLR1C	97	47.309	Equus_asinus_asinus
WBGene00019275	rpac-40	94	47.592	ENSECAG00000023516	POLR1C	95	47.592	Equus_caballus
WBGene00019275	rpac-40	94	47.025	ENSEEUG00000005471	POLR1C	97	47.025	Erinaceus_europaeus
WBGene00019275	rpac-40	92	46.765	ENSELUG00000013027	polr1c	92	46.765	Esox_lucius
WBGene00019275	rpac-40	94	46.459	ENSFCAG00000009735	POLR1C	97	46.459	Felis_catus
WBGene00019275	rpac-40	92	46.450	ENSFALG00000012111	POLR1C	99	46.450	Ficedula_albicollis
WBGene00019275	rpac-40	94	47.309	ENSFDAG00000008428	POLR1C	97	47.309	Fukomys_damarensis
WBGene00019275	rpac-40	92	36.391	ENSFHEG00000000262	polr1c	91	36.686	Fundulus_heteroclitus
WBGene00019275	rpac-40	92	45.104	ENSGMOG00000013878	polr1c	98	45.104	Gadus_morhua
WBGene00019275	rpac-40	94	46.176	ENSGALG00000010349	POLR1C	97	46.176	Gallus_gallus
WBGene00019275	rpac-40	92	45.562	ENSGAFG00000010153	polr1c	92	46.154	Gambusia_affinis
WBGene00019275	rpac-40	94	45.170	ENSGACG00000002453	polr1c	96	45.170	Gasterosteus_aculeatus
WBGene00019275	rpac-40	94	46.761	ENSGAGG00000010640	POLR1C	97	46.761	Gopherus_agassizii
WBGene00019275	rpac-40	94	46.459	ENSGGOG00000010903	POLR1C	97	46.459	Gorilla_gorilla
WBGene00019275	rpac-40	57	30.144	ENSHBUG00000023040	polr2c	79	30.144	Haplochromis_burtoni
WBGene00019275	rpac-40	75	47.810	ENSHBUG00000017816	polr1c	79	47.810	Haplochromis_burtoni
WBGene00019275	rpac-40	94	46.459	ENSHGLG00000019441	POLR1C	99	48.708	Heterocephalus_glaber_female
WBGene00019275	rpac-40	94	46.742	ENSHGLG00100005970	POLR1C	99	48.708	Heterocephalus_glaber_male
WBGene00019275	rpac-40	92	45.562	ENSHCOG00000002179	polr1c	92	45.562	Hippocampus_comes
WBGene00019275	rpac-40	90	47.576	ENSIPUG00000024464	polr1c	90	47.576	Ictalurus_punctatus
WBGene00019275	rpac-40	63	30.736	ENSSTOG00000015150	-	51	30.736	Ictidomys_tridecemlineatus
WBGene00019275	rpac-40	94	46.742	ENSSTOG00000010631	POLR1C	97	46.742	Ictidomys_tridecemlineatus
WBGene00019275	rpac-40	94	45.892	ENSJJAG00000023110	Polr1c	97	45.892	Jaculus_jaculus
WBGene00019275	rpac-40	92	44.214	ENSKMAG00000014305	polr1c	89	45.401	Kryptolebias_marmoratus
WBGene00019275	rpac-40	94	45.326	ENSLBEG00000014925	polr1c	96	45.892	Labrus_bergylta
WBGene00019275	rpac-40	76	39.711	ENSLACG00000012567	POLR1C	78	39.711	Latimeria_chalumnae
WBGene00019275	rpac-40	97	45.730	ENSLOCG00000016710	polr1c	95	45.730	Lepisosteus_oculatus
WBGene00019275	rpac-40	82	50.331	ENSLAFG00000026248	POLR1C	96	50.331	Loxodonta_africana
WBGene00019275	rpac-40	63	30.736	ENSLAFG00000027230	POLR2C	77	30.736	Loxodonta_africana
WBGene00019275	rpac-40	94	46.742	ENSMFAG00000046295	POLR1C	97	46.742	Macaca_fascicularis
WBGene00019275	rpac-40	94	46.742	ENSMMUG00000015192	POLR1C	97	46.742	Macaca_mulatta
WBGene00019275	rpac-40	94	46.742	ENSMNEG00000028073	POLR1C	97	46.742	Macaca_nemestrina
WBGene00019275	rpac-40	92	47.337	ENSMLEG00000034818	POLR1C	92	47.337	Mandrillus_leucophaeus
WBGene00019275	rpac-40	98	44.875	ENSMAMG00000008700	polr1c	99	44.875	Mastacembelus_armatus
WBGene00019275	rpac-40	92	45.562	ENSMZEG00005018545	polr1c	92	45.994	Maylandia_zebra
WBGene00019275	rpac-40	78	48.772	ENSMGAG00000011020	POLR1C	95	48.772	Meleagris_gallopavo
WBGene00019275	rpac-40	94	47.025	ENSMAUG00000014329	Polr1c	97	47.025	Mesocricetus_auratus
WBGene00019275	rpac-40	99	45.430	ENSMICG00000005027	POLR1C	99	45.430	Microcebus_murinus
WBGene00019275	rpac-40	94	46.459	ENSMOCG00000017549	Polr1c	97	46.459	Microtus_ochrogaster
WBGene00019275	rpac-40	92	36.686	ENSMMOG00000005380	polr1c	91	36.686	Mola_mola
WBGene00019275	rpac-40	82	49.502	ENSMODG00000018964	POLR1C	99	49.502	Monodelphis_domestica
WBGene00019275	rpac-40	92	36.202	ENSMALG00000011711	polr1c	91	36.499	Monopterus_albus
WBGene00019275	rpac-40	75	49.819	MGP_CAROLIEiJ_G0021662	Polr1c	99	49.451	Mus_caroli
WBGene00019275	rpac-40	63	31.064	ENSMUSG00000031783	Polr2c	53	35.000	Mus_musculus
WBGene00019275	rpac-40	94	47.875	ENSMUSG00000067148	Polr1c	99	49.446	Mus_musculus
WBGene00019275	rpac-40	94	47.875	MGP_PahariEiJ_G0020654	Polr1c	99	49.446	Mus_pahari
WBGene00019275	rpac-40	94	47.875	MGP_SPRETEiJ_G0022574	Polr1c	99	49.446	Mus_spretus
WBGene00019275	rpac-40	99	46.092	ENSMPUG00000012916	POLR1C	91	46.092	Mustela_putorius_furo
WBGene00019275	rpac-40	94	47.309	ENSMLUG00000017751	POLR1C	97	47.309	Myotis_lucifugus
WBGene00019275	rpac-40	94	47.025	ENSNGAG00000023487	Polr1c	99	50.498	Nannospalax_galili
WBGene00019275	rpac-40	93	45.294	ENSNBRG00000018742	polr1c	93	45.723	Neolamprologus_brichardi
WBGene00019275	rpac-40	94	46.459	ENSNLEG00000004035	POLR1C	97	46.176	Nomascus_leucogenys
WBGene00019275	rpac-40	94	36.827	ENSMEUG00000006778	POLR1C	97	36.827	Notamacropus_eugenii
WBGene00019275	rpac-40	73	45.652	ENSOPRG00000000145	POLR1C	96	45.652	Ochotona_princeps
WBGene00019275	rpac-40	58	50.467	ENSODEG00000017109	-	97	50.467	Octodon_degus
WBGene00019275	rpac-40	94	47.309	ENSODEG00000015831	-	97	47.309	Octodon_degus
WBGene00019275	rpac-40	99	44.658	ENSONIG00000013133	polr1c	99	44.959	Oreochromis_niloticus
WBGene00019275	rpac-40	94	45.326	ENSOANG00000003043	POLR1C	97	45.326	Ornithorhynchus_anatinus
WBGene00019275	rpac-40	94	47.309	ENSOCUG00000005504	POLR1C	97	47.309	Oryctolagus_cuniculus
WBGene00019275	rpac-40	92	44.214	ENSORLG00000019743	polr1c	93	43.620	Oryzias_latipes
WBGene00019275	rpac-40	92	44.214	ENSORLG00020006489	POLR1C	95	43.491	Oryzias_latipes_hni
WBGene00019275	rpac-40	65	41.423	ENSORLG00020005555	polr1c	68	41.423	Oryzias_latipes_hni
WBGene00019275	rpac-40	92	44.543	ENSORLG00015013322	polr1c	92	44.543	Oryzias_latipes_hsok
WBGene00019275	rpac-40	97	43.575	ENSOMEG00000016527	polr1c	98	43.575	Oryzias_melastigma
WBGene00019275	rpac-40	94	47.309	ENSOGAG00000016318	POLR1C	97	47.309	Otolemur_garnettii
WBGene00019275	rpac-40	94	47.025	ENSOARG00000007503	POLR1C	97	47.025	Ovis_aries
WBGene00019275	rpac-40	94	46.459	ENSPPAG00000043678	POLR1C	97	46.459	Pan_paniscus
WBGene00019275	rpac-40	94	46.459	ENSPPRG00000009760	POLR1C	97	46.459	Panthera_pardus
WBGene00019275	rpac-40	94	46.459	ENSPTIG00000014813	POLR1C	97	46.459	Panthera_tigris_altaica
WBGene00019275	rpac-40	94	46.459	ENSPTRG00000018202	POLR1C	97	46.459	Pan_troglodytes
WBGene00019275	rpac-40	94	46.742	ENSPANG00000009025	POLR1C	96	46.742	Papio_anubis
WBGene00019275	rpac-40	94	46.307	ENSPKIG00000009858	polr1c	96	46.307	Paramormyrops_kingsleyae
WBGene00019275	rpac-40	94	46.023	ENSPSIG00000012580	POLR1C	91	46.023	Pelodiscus_sinensis
WBGene00019275	rpac-40	92	35.714	ENSPMGG00000012121	polr1c	90	35.714	Periophthalmus_magnuspinnatus
WBGene00019275	rpac-40	57	30.622	ENSPMGG00000021249	polr2c	76	30.622	Periophthalmus_magnuspinnatus
WBGene00019275	rpac-40	94	46.761	ENSPEMG00000006970	Polr1c	97	46.761	Peromyscus_maniculatus_bairdii
WBGene00019275	rpac-40	98	46.721	ENSPMAG00000005560	polr1c	99	46.721	Petromyzon_marinus
WBGene00019275	rpac-40	94	45.326	ENSPCIG00000028137	POLR1C	95	45.326	Phascolarctos_cinereus
WBGene00019275	rpac-40	92	45.266	ENSPFOG00000014342	POLR1C	92	45.858	Poecilia_formosa
WBGene00019275	rpac-40	97	43.956	ENSPFOG00000014357	polr1c	98	44.505	Poecilia_formosa
WBGene00019275	rpac-40	56	49.756	ENSPLAG00000004111	polr1c	92	47.964	Poecilia_latipinna
WBGene00019275	rpac-40	92	45.266	ENSPMEG00000011877	-	92	45.858	Poecilia_mexicana
WBGene00019275	rpac-40	92	45.266	ENSPMEG00000008420	polr1c	92	45.858	Poecilia_mexicana
WBGene00019275	rpac-40	92	46.154	ENSPREG00000007985	polr1c	92	46.154	Poecilia_reticulata
WBGene00019275	rpac-40	94	46.176	ENSPPYG00000016645	POLR1C	97	46.176	Pongo_abelii
WBGene00019275	rpac-40	94	46.742	ENSPCOG00000024628	POLR1C	97	46.742	Propithecus_coquereli
WBGene00019275	rpac-40	94	43.343	ENSPVAG00000005689	POLR1C	97	43.343	Pteropus_vampyrus
WBGene00019275	rpac-40	92	45.858	ENSPNYG00000003620	polr1c	92	46.291	Pundamilia_nyererei
WBGene00019275	rpac-40	94	45.455	ENSPNAG00000008443	polr1c	96	45.455	Pygocentrus_nattereri
WBGene00019275	rpac-40	94	47.887	ENSRNOG00000019079	Polr1c	99	49.084	Rattus_norvegicus
WBGene00019275	rpac-40	94	46.176	ENSRBIG00000007155	POLR1C	97	46.176	Rhinopithecus_bieti
WBGene00019275	rpac-40	94	46.459	ENSRROG00000000257	POLR1C	97	46.459	Rhinopithecus_roxellana
WBGene00019275	rpac-40	89	42.073	YPR110C	RPC40	93	42.073	Saccharomyces_cerevisiae
WBGene00019275	rpac-40	94	45.892	ENSSBOG00000025735	POLR1C	96	45.426	Saimiri_boliviensis_boliviensis
WBGene00019275	rpac-40	76	47.653	ENSSHAG00000014456	POLR1C	78	47.653	Sarcophilus_harrisii
WBGene00019275	rpac-40	94	47.191	ENSSFOG00015019860	polr1c	97	47.191	Scleropages_formosus
WBGene00019275	rpac-40	92	46.450	ENSSMAG00000018865	polr1c	92	46.450	Scophthalmus_maximus
WBGene00019275	rpac-40	98	45.455	ENSSDUG00000015745	polr1c	91	46.006	Seriola_dumerili
WBGene00019275	rpac-40	98	45.179	ENSSLDG00000018285	polr1c	91	45.730	Seriola_lalandi_dorsalis
WBGene00019275	rpac-40	92	47.059	ENSSPUG00000011822	POLR1C	92	47.059	Sphenodon_punctatus
WBGene00019275	rpac-40	92	46.154	ENSSPAG00000022369	polr1c	92	46.746	Stegastes_partitus
WBGene00019275	rpac-40	94	46.459	ENSSSCG00000028007	POLR1C	93	49.834	Sus_scrofa
WBGene00019275	rpac-40	92	45.858	ENSTGUG00000009159	POLR1C	95	45.858	Taeniopygia_guttata
WBGene00019275	rpac-40	98	43.490	ENSTRUG00000006264	polr1c	99	43.490	Takifugu_rubripes
WBGene00019275	rpac-40	75	49.635	ENSTTRG00000006344	POLR1C	75	49.635	Tursiops_truncatus
WBGene00019275	rpac-40	94	47.309	ENSUAMG00000025602	POLR1C	97	47.309	Ursus_americanus
WBGene00019275	rpac-40	94	47.309	ENSUMAG00000005938	POLR1C	97	47.309	Ursus_maritimus
WBGene00019275	rpac-40	94	45.609	ENSVVUG00000028922	POLR1C	97	45.609	Vulpes_vulpes
WBGene00019275	rpac-40	94	47.727	ENSXETG00000010882	polr1c	97	47.727	Xenopus_tropicalis
WBGene00019275	rpac-40	92	45.266	ENSXCOG00000014185	polr1c	92	45.266	Xiphophorus_couchianus
WBGene00019275	rpac-40	92	46.154	ENSXMAG00000015076	polr1c	92	46.154	Xiphophorus_maculatus