EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00019334 (Gene tree)
Gene ID: -
Gene Symbol: K02F3.12
Alias: -
Full Name: Putative ATP-dependent DNA helicase Q1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3531 bases
Position: chrIII:856560-860090
Accession: Q9TXJ8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K02F3	ResIII	PF04851.15	7.5e-07	1	1
K02F3	ResIII	PF04851.15	7.9e-07	1	1
K02F3	ResIII	PF04851.15	7.9e-07	1	1
K02F3	DEAD	PF00270.29	2.6e-18	1	1
K02F3	DEAD	PF00270.29	2.6e-18	1	1
K02F3	DEAD	PF00270.29	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K02F3.12b.2	-	1858	NM_001027486	K02F3.12b.2	608 (aa)	NP_001022657	UPI00004CCEBF
K02F3.12b.1	-	1953	NM_001027485	K02F3.12b.1	608 (aa)	NP_001022656	UPI00004CCEBF
K02F3.12a	-	1953	NM_001027485	K02F3.12a	631 (aa)	NP_001022656	Q9TXJ8

Gene Model

Click here to download WBGene00019334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00019334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00019334	K02F3.12	66	36.283	WBGene00004322	rcq-5	54	36.283
WBGene00019334	K02F3.12	96	34.528	WBGene00001865	him-6	61	34.528

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00019334	K02F3.12	97	45.172	ENSG00000004700	RECQL	98	44.898	Homo_sapiens
WBGene00019334	K02F3.12	95	45.059	ENSAMEG00000016233	RECQL	91	45.059	Ailuropoda_melanoleuca
WBGene00019334	K02F3.12	95	44.572	ENSACIG00000020781	recql	94	44.901	Amphilophus_citrinellus
WBGene00019334	K02F3.12	93	46.416	ENSAOCG00000010244	recql	91	46.758	Amphiprion_ocellaris
WBGene00019334	K02F3.12	93	45.531	ENSAPEG00000002040	recql	90	45.700	Amphiprion_percula
WBGene00019334	K02F3.12	98	43.891	ENSATEG00000023342	recql	92	44.759	Anabas_testudineus
WBGene00019334	K02F3.12	92	46.552	ENSAPLG00000003404	RECQL	88	46.552	Anas_platyrhynchos
WBGene00019334	K02F3.12	72	50.679	ENSACAG00000017383	RECQL	98	50.679	Anolis_carolinensis
WBGene00019334	K02F3.12	97	45.230	ENSANAG00000035372	RECQL	92	45.230	Aotus_nancymaae
WBGene00019334	K02F3.12	99	42.744	ENSACLG00000021416	recql	93	41.186	Astatotilapia_calliptera
WBGene00019334	K02F3.12	92	45.128	ENSAMXG00000014249	recql	87	45.128	Astyanax_mexicanus
WBGene00019334	K02F3.12	95	46.231	ENSBTAG00000021083	RECQL	90	46.231	Bos_taurus
WBGene00019334	K02F3.12	97	45.395	ENSCJAG00000044420	RECQL	93	45.395	Callithrix_jacchus
WBGene00019334	K02F3.12	97	45.246	ENSCAFG00000012221	RECQL	93	45.246	Canis_familiaris
WBGene00019334	K02F3.12	97	45.246	ENSCAFG00020007872	RECQL	93	45.246	Canis_lupus_dingo
WBGene00019334	K02F3.12	95	46.231	ENSCHIG00000024281	RECQL	92	46.231	Capra_hircus
WBGene00019334	K02F3.12	98	45.172	ENSTSYG00000009224	RECQL	92	45.172	Carlito_syrichta
WBGene00019334	K02F3.12	98	44.754	ENSCPOG00000024644	RECQL	92	44.754	Cavia_porcellus
WBGene00019334	K02F3.12	97	45.395	ENSCCAG00000028085	RECQL	92	45.395	Cebus_capucinus
WBGene00019334	K02F3.12	97	44.737	ENSCATG00000036038	RECQL	93	44.901	Cercocebus_atys
WBGene00019334	K02F3.12	98	45.172	ENSCLAG00000014618	RECQL	93	45.172	Chinchilla_lanigera
WBGene00019334	K02F3.12	97	44.681	ENSCSAG00000007974	RECQL	92	44.845	Chlorocebus_sabaeus
WBGene00019334	K02F3.12	86	44.591	ENSCHOG00000002452	RECQL	82	44.591	Choloepus_hoffmanni
WBGene00019334	K02F3.12	93	46.655	ENSCPBG00000009109	RECQL	87	46.564	Chrysemys_picta_bellii
WBGene00019334	K02F3.12	93	42.341	ENSCING00000004012	-	92	42.341	Ciona_intestinalis
WBGene00019334	K02F3.12	93	43.643	ENSCSAVG00000011052	-	99	43.643	Ciona_savignyi
WBGene00019334	K02F3.12	97	45.156	ENSCANG00000035259	RECQL	93	45.066	Colobus_angolensis_palliatus
WBGene00019334	K02F3.12	97	44.918	ENSCGRG00001015141	Recql	93	44.918	Cricetulus_griseus_chok1gshd
WBGene00019334	K02F3.12	97	44.918	ENSCGRG00000003545	Recql	93	44.918	Cricetulus_griseus_crigri
WBGene00019334	K02F3.12	97	43.994	ENSCSEG00000015932	recql	96	43.994	Cynoglossus_semilaevis
WBGene00019334	K02F3.12	92	46.021	ENSCVAG00000014613	recql	91	46.021	Cyprinodon_variegatus
WBGene00019334	K02F3.12	97	44.839	ENSDARG00000007175	recql	95	44.839	Danio_rerio
WBGene00019334	K02F3.12	77	51.158	ENSDNOG00000013557	RECQL	97	51.158	Dasypus_novemcinctus
WBGene00019334	K02F3.12	96	45.349	ENSDORG00000015884	Recql	98	41.463	Dipodomys_ordii
WBGene00019334	K02F3.12	92	43.031	ENSETEG00000018631	-	87	43.031	Echinops_telfairi
WBGene00019334	K02F3.12	94	45.423	ENSEASG00005014041	RECQL	91	48.755	Equus_asinus_asinus
WBGene00019334	K02F3.12	94	44.992	ENSECAG00000024762	RECQL	80	44.992	Equus_caballus
WBGene00019334	K02F3.12	98	43.660	ENSELUG00000011528	recql	93	44.646	Esox_lucius
WBGene00019334	K02F3.12	98	44.845	ENSFCAG00000030888	RECQL	92	44.845	Felis_catus
WBGene00019334	K02F3.12	93	45.455	ENSFALG00000002635	RECQL	90	45.455	Ficedula_albicollis
WBGene00019334	K02F3.12	98	44.918	ENSFDAG00000019693	RECQL	93	44.918	Fukomys_damarensis
WBGene00019334	K02F3.12	98	43.171	ENSFHEG00000014563	recql	97	43.171	Fundulus_heteroclitus
WBGene00019334	K02F3.12	83	43.750	ENSGMOG00000010504	recql	99	43.750	Gadus_morhua
WBGene00019334	K02F3.12	92	46.114	ENSGALG00000013174	RECQL	86	46.459	Gallus_gallus
WBGene00019334	K02F3.12	93	44.463	ENSGACG00000001005	recql	95	44.887	Gasterosteus_aculeatus
WBGene00019334	K02F3.12	93	46.312	ENSGAGG00000025428	RECQL	87	46.220	Gopherus_agassizii
WBGene00019334	K02F3.12	98	45.008	ENSGGOG00000010985	RECQL	92	45.172	Gorilla_gorilla
WBGene00019334	K02F3.12	99	42.902	ENSHBUG00000001341	recql	94	43.372	Haplochromis_burtoni
WBGene00019334	K02F3.12	98	45.172	ENSHGLG00000009712	RECQL	94	45.008	Heterocephalus_glaber_female
WBGene00019334	K02F3.12	98	44.590	ENSHGLG00100015306	RECQL	94	44.590	Heterocephalus_glaber_male
WBGene00019334	K02F3.12	95	45.946	ENSHCOG00000012735	recql	92	45.946	Hippocampus_comes
WBGene00019334	K02F3.12	84	48.362	ENSIPUG00000024092	recql	92	41.550	Ictalurus_punctatus
WBGene00019334	K02F3.12	97	42.339	ENSSTOG00000006328	RECQL	92	42.339	Ictidomys_tridecemlineatus
WBGene00019334	K02F3.12	97	44.059	ENSJJAG00000017339	Recql	99	44.079	Jaculus_jaculus
WBGene00019334	K02F3.12	94	43.967	ENSKMAG00000011232	recql	92	44.132	Kryptolebias_marmoratus
WBGene00019334	K02F3.12	98	43.631	ENSLBEG00000023652	recql	89	45.593	Labrus_bergylta
WBGene00019334	K02F3.12	98	45.659	ENSLACG00000011482	RECQL	94	45.659	Latimeria_chalumnae
WBGene00019334	K02F3.12	93	39.175	ENSLOCG00000015393	recql	89	39.175	Lepisosteus_oculatus
WBGene00019334	K02F3.12	94	46.416	ENSLAFG00000000963	RECQL	89	46.416	Loxodonta_africana
WBGene00019334	K02F3.12	97	44.901	ENSMFAG00000031470	RECQL	93	45.066	Macaca_fascicularis
WBGene00019334	K02F3.12	97	44.845	ENSMMUG00000010857	RECQL	92	45.008	Macaca_mulatta
WBGene00019334	K02F3.12	97	44.901	ENSMNEG00000031827	RECQL	93	45.066	Macaca_nemestrina
WBGene00019334	K02F3.12	97	44.811	ENSMLEG00000039659	RECQL	99	44.975	Mandrillus_leucophaeus
WBGene00019334	K02F3.12	97	42.880	ENSMAMG00000023289	recql	94	43.042	Mastacembelus_armatus
WBGene00019334	K02F3.12	95	43.092	ENSMZEG00005016027	recql	93	43.421	Maylandia_zebra
WBGene00019334	K02F3.12	92	46.287	ENSMGAG00000013629	RECQL	86	46.287	Meleagris_gallopavo
WBGene00019334	K02F3.12	97	39.675	ENSMAUG00000010642	Recql	98	41.463	Mesocricetus_auratus
WBGene00019334	K02F3.12	94	45.501	ENSMICG00000002664	RECQL	89	45.501	Microcebus_murinus
WBGene00019334	K02F3.12	98	44.788	ENSMOCG00000007093	Recql	95	44.535	Microtus_ochrogaster
WBGene00019334	K02F3.12	92	43.814	ENSMMOG00000007279	recql	91	44.054	Mola_mola
WBGene00019334	K02F3.12	98	43.710	ENSMODG00000017805	RECQL	92	43.710	Monodelphis_domestica
WBGene00019334	K02F3.12	96	44.535	ENSMALG00000004415	recql	94	44.535	Monopterus_albus
WBGene00019334	K02F3.12	97	45.752	MGP_CAROLIEiJ_G0029030	Recql	95	45.752	Mus_caroli
WBGene00019334	K02F3.12	98	44.625	ENSMUSG00000030243	Recql	96	44.625	Mus_musculus
WBGene00019334	K02F3.12	97	45.246	MGP_PahariEiJ_G0022791	Recql	98	43.293	Mus_pahari
WBGene00019334	K02F3.12	98	44.951	MGP_SPRETEiJ_G0030085	Recql	96	44.951	Mus_spretus
WBGene00019334	K02F3.12	94	46.350	ENSMPUG00000000202	RECQL	89	46.350	Mustela_putorius_furo
WBGene00019334	K02F3.12	98	45.172	ENSMLUG00000005741	RECQL	92	45.172	Myotis_lucifugus
WBGene00019334	K02F3.12	98	44.754	ENSNGAG00000010997	-	93	44.754	Nannospalax_galili
WBGene00019334	K02F3.12	98	36.260	ENSNGAG00000020417	-	91	36.260	Nannospalax_galili
WBGene00019334	K02F3.12	92	44.123	ENSNBRG00000020825	recql	91	44.407	Neolamprologus_brichardi
WBGene00019334	K02F3.12	97	44.901	ENSNLEG00000004797	RECQL	92	45.008	Nomascus_leucogenys
WBGene00019334	K02F3.12	95	46.566	ENSOPRG00000007493	RECQL	98	46.566	Ochotona_princeps
WBGene00019334	K02F3.12	97	45.050	ENSODEG00000010240	RECQL	97	44.975	Octodon_degus
WBGene00019334	K02F3.12	95	42.928	ENSONIG00000001694	recql	93	43.257	Oreochromis_niloticus
WBGene00019334	K02F3.12	57	33.428	ENSOANG00000021930	-	99	34.706	Ornithorhynchus_anatinus
WBGene00019334	K02F3.12	95	46.037	ENSOCUG00000008787	RECQL	90	46.037	Oryctolagus_cuniculus
WBGene00019334	K02F3.12	92	45.424	ENSORLG00000012853	recql	92	43.156	Oryzias_latipes
WBGene00019334	K02F3.12	93	45.270	ENSORLG00020020245	recql	91	45.270	Oryzias_latipes_hni
WBGene00019334	K02F3.12	93	45.101	ENSORLG00015018708	recql	91	45.101	Oryzias_latipes_hsok
WBGene00019334	K02F3.12	93	45.378	ENSOMEG00000019484	recql	92	45.378	Oryzias_melastigma
WBGene00019334	K02F3.12	97	44.975	ENSOGAG00000004754	RECQL	92	44.975	Otolemur_garnettii
WBGene00019334	K02F3.12	95	46.231	ENSOARG00000020343	RECQL	90	46.231	Ovis_aries
WBGene00019334	K02F3.12	88	47.253	ENSPPAG00000030306	RECQL	89	46.447	Pan_paniscus
WBGene00019334	K02F3.12	98	45.008	ENSPPRG00000010371	RECQL	92	45.008	Panthera_pardus
WBGene00019334	K02F3.12	97	45.082	ENSPTIG00000008593	RECQL	93	45.082	Panthera_tigris_altaica
WBGene00019334	K02F3.12	97	45.230	ENSPTRG00000004758	RECQL	91	45.395	Pan_troglodytes
WBGene00019334	K02F3.12	97	44.737	ENSPANG00000003394	RECQL	93	44.901	Papio_anubis
WBGene00019334	K02F3.12	94	44.574	ENSPKIG00000008072	recql	90	44.574	Paramormyrops_kingsleyae
WBGene00019334	K02F3.12	93	45.969	ENSPSIG00000002979	RECQL	86	45.704	Pelodiscus_sinensis
WBGene00019334	K02F3.12	93	46.374	ENSPMGG00000011010	recql	90	46.077	Periophthalmus_magnuspinnatus
WBGene00019334	K02F3.12	97	45.499	ENSPEMG00000016418	Recql	98	45.215	Peromyscus_maniculatus_bairdii
WBGene00019334	K02F3.12	94	45.882	ENSPMAG00000005495	recql	96	45.882	Petromyzon_marinus
WBGene00019334	K02F3.12	95	45.455	ENSPCIG00000022452	RECQL	89	45.623	Phascolarctos_cinereus
WBGene00019334	K02F3.12	92	44.444	ENSPFOG00000000940	recql	88	44.444	Poecilia_formosa
WBGene00019334	K02F3.12	93	44.312	ENSPLAG00000006194	recql	88	44.312	Poecilia_latipinna
WBGene00019334	K02F3.12	93	44.312	ENSPMEG00000013399	recql	88	44.312	Poecilia_mexicana
WBGene00019334	K02F3.12	92	44.274	ENSPREG00000012991	recql	90	44.274	Poecilia_reticulata
WBGene00019334	K02F3.12	97	44.845	ENSPPYG00000004352	RECQL	92	45.008	Pongo_abelii
WBGene00019334	K02F3.12	84	45.179	ENSPCOG00000027353	RECQL	89	45.179	Propithecus_coquereli
WBGene00019334	K02F3.12	88	48.080	ENSPVAG00000002457	RECQL	83	48.080	Pteropus_vampyrus
WBGene00019334	K02F3.12	99	42.587	ENSPNYG00000016013	recql	93	43.257	Pundamilia_nyererei
WBGene00019334	K02F3.12	97	43.831	ENSPNAG00000029317	recql	94	43.791	Pygocentrus_nattereri
WBGene00019334	K02F3.12	98	44.318	ENSRNOG00000012602	Recql	98	47.244	Rattus_norvegicus
WBGene00019334	K02F3.12	97	44.737	ENSRBIG00000034966	RECQL	93	44.901	Rhinopithecus_bieti
WBGene00019334	K02F3.12	97	44.737	ENSRROG00000010234	RECQL	93	44.901	Rhinopithecus_roxellana
WBGene00019334	K02F3.12	97	45.008	ENSSBOG00000005645	RECQL	92	45.008	Saimiri_boliviensis_boliviensis
WBGene00019334	K02F3.12	96	44.592	ENSSHAG00000015815	RECQL	90	45.349	Sarcophilus_harrisii
WBGene00019334	K02F3.12	95	45.258	ENSSFOG00015002537	recql	91	45.258	Scleropages_formosus
WBGene00019334	K02F3.12	92	43.581	ENSSMAG00000014910	recql	90	43.919	Scophthalmus_maximus
WBGene00019334	K02F3.12	99	43.038	ENSSDUG00000019205	recql	95	42.504	Seriola_dumerili
WBGene00019334	K02F3.12	99	42.880	ENSSLDG00000013921	recql	93	43.987	Seriola_lalandi_dorsalis
WBGene00019334	K02F3.12	84	39.335	ENSSPUG00000018613	RECQL	86	38.165	Sphenodon_punctatus
WBGene00019334	K02F3.12	94	44.536	ENSSPAG00000008384	recql	93	44.536	Stegastes_partitus
WBGene00019334	K02F3.12	94	46.689	ENSSSCG00000000580	RECQL	88	49.080	Sus_scrofa
WBGene00019334	K02F3.12	97	44.298	ENSTGUG00000011730	RECQL	91	44.118	Taeniopygia_guttata
WBGene00019334	K02F3.12	93	46.073	ENSTRUG00000000534	recql	98	45.470	Takifugu_rubripes
WBGene00019334	K02F3.12	93	45.361	ENSTNIG00000007242	recql	91	45.876	Tetraodon_nigroviridis
WBGene00019334	K02F3.12	74	48.043	ENSTBEG00000004653	RECQL	69	48.043	Tupaia_belangeri
WBGene00019334	K02F3.12	86	43.915	ENSTTRG00000003296	RECQL	82	43.915	Tursiops_truncatus
WBGene00019334	K02F3.12	92	46.181	ENSUAMG00000003261	RECQL	88	46.181	Ursus_americanus
WBGene00019334	K02F3.12	94	45.671	ENSUMAG00000001523	RECQL	90	45.671	Ursus_maritimus
WBGene00019334	K02F3.12	86	48.211	ENSVPAG00000007546	RECQL	80	48.211	Vicugna_pacos
WBGene00019334	K02F3.12	97	45.246	ENSVVUG00000001101	RECQL	93	45.246	Vulpes_vulpes
WBGene00019334	K02F3.12	73	46.256	ENSXETG00000013524	recql	86	46.696	Xenopus_tropicalis
WBGene00019334	K02F3.12	93	44.369	ENSXMAG00000029316	recql	90	44.369	Xiphophorus_maculatus