EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00019498 (Gene tree)
Gene ID: -
Gene Symbol: K07E8.7
Alias: -
Full Name: Pseudouridine synthase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 9358 bases
Position: chrII:641010-650367
Accession: A0A0M7RF85
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K07E8	PseudoU_synth_2	PF00849.22	6.7e-25	1	1
K07E8	PseudoU_synth_2	PF00849.22	8e-25	1	1
K07E8	PseudoU_synth_2	PF00849.22	8.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K07E8.7b	-	1321	NM_001322697	K07E8.7b	421 (aa)	NP_001309514	A0A0M7RF85
K07E8.7c	-	1349	NM_001322698	K07E8.7c	379 (aa)	NP_001309515	A0A0M7RF85
K07E8.7a	-	1370	NM_001322698	K07E8.7a	432 (aa)	NP_001309515	O16686

Gene Model

Click here to download WBGene00019498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00019498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00019498	K07E8.7	97	34.663	ENSG00000166133	RPUSD2	74	35.162	Homo_sapiens
WBGene00019498	K07E8.7	97	33.491	ENSAPOG00000000817	rpusd2	74	33.726	Acanthochromis_polyacanthus
WBGene00019498	K07E8.7	97	34.988	ENSAMEG00000016996	RPUSD2	74	35.732	Ailuropoda_melanoleuca
WBGene00019498	K07E8.7	97	35.678	ENSACIG00000024029	rpusd2	80	35.678	Amphilophus_citrinellus
WBGene00019498	K07E8.7	97	33.412	ENSAOCG00000015237	rpusd2	74	33.412	Amphiprion_ocellaris
WBGene00019498	K07E8.7	97	33.333	ENSAPEG00000021763	rpusd2	74	33.333	Amphiprion_percula
WBGene00019498	K07E8.7	79	37.604	ENSATEG00000015242	rpusd2	60	37.604	Anabas_testudineus
WBGene00019498	K07E8.7	97	34.414	ENSAPLG00000004723	RPUSD2	95	34.414	Anas_platyrhynchos
WBGene00019498	K07E8.7	97	35.627	ENSACAG00000013893	RPUSD2	84	35.627	Anolis_carolinensis
WBGene00019498	K07E8.7	97	35.910	ENSANAG00000009691	RPUSD2	74	35.910	Aotus_nancymaae
WBGene00019498	K07E8.7	97	32.783	ENSACLG00000019531	rpusd2	74	33.019	Astatotilapia_calliptera
WBGene00019498	K07E8.7	75	42.807	ENSAMXG00000013376	rpusd2	60	36.986	Astyanax_mexicanus
WBGene00019498	K07E8.7	97	35.162	ENSBTAG00000003193	RPUSD2	73	35.162	Bos_taurus
WBGene00019498	K07E8.7	97	35.910	ENSCJAG00000020841	RPUSD2	74	35.910	Callithrix_jacchus
WBGene00019498	K07E8.7	97	34.491	ENSCAFG00000009165	RPUSD2	83	33.118	Canis_familiaris
WBGene00019498	K07E8.7	97	34.491	ENSCAFG00020005849	RPUSD2	83	33.118	Canis_lupus_dingo
WBGene00019498	K07E8.7	97	34.913	ENSCHIG00000006152	RPUSD2	73	34.913	Capra_hircus
WBGene00019498	K07E8.7	97	33.915	ENSTSYG00000012844	RPUSD2	74	33.995	Carlito_syrichta
WBGene00019498	K07E8.7	58	42.273	ENSCAPG00000006895	-	77	42.273	Cavia_aperea
WBGene00019498	K07E8.7	97	34.663	ENSCPOG00000013201	RPUSD2	86	32.766	Cavia_porcellus
WBGene00019498	K07E8.7	97	35.910	ENSCCAG00000024378	RPUSD2	74	35.910	Cebus_capucinus
WBGene00019498	K07E8.7	97	35.484	ENSCATG00000043734	RPUSD2	74	35.484	Cercocebus_atys
WBGene00019498	K07E8.7	97	35.025	ENSCLAG00000011862	RPUSD2	73	35.025	Chinchilla_lanigera
WBGene00019498	K07E8.7	97	34.988	ENSCSAG00000007538	RPUSD2	78	35.484	Chlorocebus_sabaeus
WBGene00019498	K07E8.7	80	33.036	ENSCHOG00000004834	RPUSD2	62	33.631	Choloepus_hoffmanni
WBGene00019498	K07E8.7	75	42.403	ENSCPBG00000013419	RPUSD2	53	42.403	Chrysemys_picta_bellii
WBGene00019498	K07E8.7	54	36.493	ENSCSAVG00000007814	-	50	36.493	Ciona_savignyi
WBGene00019498	K07E8.7	84	30.841	ENSCSAVG00000007812	-	99	30.841	Ciona_savignyi
WBGene00019498	K07E8.7	97	35.732	ENSCANG00000003659	RPUSD2	74	35.732	Colobus_angolensis_palliatus
WBGene00019498	K07E8.7	97	36.020	ENSCGRG00001009839	Rpusd2	70	36.020	Cricetulus_griseus_chok1gshd
WBGene00019498	K07E8.7	97	36.020	ENSCGRG00000012348	Rpusd2	72	36.020	Cricetulus_griseus_crigri
WBGene00019498	K07E8.7	97	33.094	ENSCSEG00000001953	rpusd2	72	33.094	Cynoglossus_semilaevis
WBGene00019498	K07E8.7	97	34.577	ENSCVAG00000010848	rpusd2	85	32.484	Cyprinodon_variegatus
WBGene00019498	K07E8.7	97	32.697	ENSDARG00000060992	rpusd2	71	32.936	Danio_rerio
WBGene00019498	K07E8.7	97	34.414	ENSDNOG00000047745	RPUSD2	85	31.808	Dasypus_novemcinctus
WBGene00019498	K07E8.7	97	35.176	ENSDORG00000009092	Rpusd2	92	35.176	Dipodomys_ordii
WBGene00019498	K07E8.7	97	32.353	FBgn0032256	RluA-2	79	31.532	Drosophila_melanogaster
WBGene00019498	K07E8.7	97	34.243	ENSETEG00000008581	RPUSD2	75	34.243	Echinops_telfairi
WBGene00019498	K07E8.7	97	34.491	ENSEASG00005016463	RPUSD2	72	34.491	Equus_asinus_asinus
WBGene00019498	K07E8.7	97	33.995	ENSECAG00000024178	RPUSD2	72	34.491	Equus_caballus
WBGene00019498	K07E8.7	97	33.333	ENSELUG00000016786	rpusd2	75	33.333	Esox_lucius
WBGene00019498	K07E8.7	97	34.988	ENSFCAG00000040796	RPUSD2	73	35.484	Felis_catus
WBGene00019498	K07E8.7	97	35.697	ENSFALG00000001122	RPUSD2	61	43.463	Ficedula_albicollis
WBGene00019498	K07E8.7	97	34.500	ENSFDAG00000003070	RPUSD2	78	34.500	Fukomys_damarensis
WBGene00019498	K07E8.7	79	36.648	ENSFHEG00000007518	rpusd2	64	36.648	Fundulus_heteroclitus
WBGene00019498	K07E8.7	97	34.783	ENSGMOG00000011014	rpusd2	99	33.678	Gadus_morhua
WBGene00019498	K07E8.7	97	33.806	ENSGALG00000041216	RPUSD2	99	32.025	Gallus_gallus
WBGene00019498	K07E8.7	97	36.082	ENSGAFG00000003390	rpusd2	71	36.082	Gambusia_affinis
WBGene00019498	K07E8.7	98	31.864	ENSGACG00000008656	rpusd2	95	31.864	Gasterosteus_aculeatus
WBGene00019498	K07E8.7	97	35.572	ENSGAGG00000013098	RPUSD2	78	35.572	Gopherus_agassizii
WBGene00019498	K07E8.7	97	34.414	ENSGGOG00000006684	RPUSD2	74	34.913	Gorilla_gorilla
WBGene00019498	K07E8.7	97	32.547	ENSHBUG00000023777	rpusd2	74	32.783	Haplochromis_burtoni
WBGene00019498	K07E8.7	97	34.761	ENSHGLG00000012765	RPUSD2	73	34.761	Heterocephalus_glaber_female
WBGene00019498	K07E8.7	97	34.761	ENSHGLG00100006653	RPUSD2	73	34.761	Heterocephalus_glaber_male
WBGene00019498	K07E8.7	97	34.293	ENSHCOG00000015587	rpusd2	72	34.293	Hippocampus_comes
WBGene00019498	K07E8.7	97	35.507	ENSIPUG00000021006	rpusd2	70	35.507	Ictalurus_punctatus
WBGene00019498	K07E8.7	97	34.165	ENSSTOG00000025619	RPUSD2	73	34.165	Ictidomys_tridecemlineatus
WBGene00019498	K07E8.7	97	36.160	ENSJJAG00000023160	Rpusd2	75	36.160	Jaculus_jaculus
WBGene00019498	K07E8.7	97	34.038	ENSKMAG00000006618	rpusd2	73	34.038	Kryptolebias_marmoratus
WBGene00019498	K07E8.7	97	33.412	ENSLBEG00000021571	rpusd2	83	31.524	Labrus_bergylta
WBGene00019498	K07E8.7	80	40.328	ENSLACG00000017338	RPUSD2	66	40.328	Latimeria_chalumnae
WBGene00019498	K07E8.7	97	36.842	ENSLOCG00000014755	rpusd2	96	35.232	Lepisosteus_oculatus
WBGene00019498	K07E8.7	97	34.663	ENSLAFG00000015588	RPUSD2	76	34.663	Loxodonta_africana
WBGene00019498	K07E8.7	97	34.988	ENSMFAG00000045062	RPUSD2	74	35.484	Macaca_fascicularis
WBGene00019498	K07E8.7	97	34.988	ENSMMUG00000001483	RPUSD2	74	35.484	Macaca_mulatta
WBGene00019498	K07E8.7	97	30.000	ENSMNEG00000041429	RPUSD2	74	30.000	Macaca_nemestrina
WBGene00019498	K07E8.7	80	35.207	ENSMLEG00000036551	RPUSD2	79	35.799	Mandrillus_leucophaeus
WBGene00019498	K07E8.7	97	32.783	ENSMZEG00005006947	rpusd2	81	33.019	Maylandia_zebra
WBGene00019498	K07E8.7	97	35.484	ENSMGAG00000003058	RPUSD2	89	35.484	Meleagris_gallopavo
WBGene00019498	K07E8.7	97	36.020	ENSMAUG00000020467	Rpusd2	72	36.020	Mesocricetus_auratus
WBGene00019498	K07E8.7	97	34.500	ENSMICG00000028637	RPUSD2	74	34.500	Microcebus_murinus
WBGene00019498	K07E8.7	97	35.500	ENSMOCG00000020061	Rpusd2	72	35.500	Microtus_ochrogaster
WBGene00019498	K07E8.7	97	33.820	ENSMMOG00000012020	rpusd2	83	32.196	Mola_mola
WBGene00019498	K07E8.7	97	35.338	ENSMODG00000000300	RPUSD2	74	35.338	Monodelphis_domestica
WBGene00019498	K07E8.7	97	35.323	MGP_CAROLIEiJ_G0024130	Rpusd2	72	35.787	Mus_caroli
WBGene00019498	K07E8.7	97	35.516	ENSMUSG00000027324	Rpusd2	72	35.516	Mus_musculus
WBGene00019498	K07E8.7	97	35.516	MGP_PahariEiJ_G0025573	Rpusd2	72	35.930	Mus_pahari
WBGene00019498	K07E8.7	97	36.111	MGP_SPRETEiJ_G0025046	Rpusd2	72	36.111	Mus_spretus
WBGene00019498	K07E8.7	97	35.484	ENSMPUG00000008517	RPUSD2	83	33.763	Mustela_putorius_furo
WBGene00019498	K07E8.7	97	35.732	ENSMLUG00000007971	RPUSD2	79	35.732	Myotis_lucifugus
WBGene00019498	K07E8.7	97	35.768	ENSNGAG00000014126	Rpusd2	73	35.768	Nannospalax_galili
WBGene00019498	K07E8.7	97	34.414	ENSNBRG00000010070	rpusd2	72	34.414	Neolamprologus_brichardi
WBGene00019498	K07E8.7	98	34.729	ENSNLEG00000035735	RPUSD2	74	34.729	Nomascus_leucogenys
WBGene00019498	K07E8.7	97	35.678	ENSMEUG00000008500	RPUSD2	89	33.045	Notamacropus_eugenii
WBGene00019498	K07E8.7	98	35.323	ENSOPRG00000014177	-	75	35.323	Ochotona_princeps
WBGene00019498	K07E8.7	97	35.279	ENSODEG00000017193	RPUSD2	74	35.279	Octodon_degus
WBGene00019498	K07E8.7	97	35.025	ENSONIG00000020102	rpusd2	80	35.025	Oreochromis_niloticus
WBGene00019498	K07E8.7	66	40.637	ENSOANG00000011262	-	98	40.637	Ornithorhynchus_anatinus
WBGene00019498	K07E8.7	97	36.160	ENSOCUG00000015745	RPUSD2	71	36.160	Oryctolagus_cuniculus
WBGene00019498	K07E8.7	97	34.577	ENSORLG00000015516	rpusd2	73	34.577	Oryzias_latipes
WBGene00019498	K07E8.7	97	35.013	ENSORLG00020010533	rpusd2	73	35.013	Oryzias_latipes_hni
WBGene00019498	K07E8.7	97	35.013	ENSORLG00015009206	rpusd2	73	35.013	Oryzias_latipes_hsok
WBGene00019498	K07E8.7	97	35.385	ENSOMEG00000007355	rpusd2	79	32.618	Oryzias_melastigma
WBGene00019498	K07E8.7	97	34.913	ENSOGAG00000004867	RPUSD2	77	34.913	Otolemur_garnettii
WBGene00019498	K07E8.7	97	35.162	ENSOARG00000020235	RPUSD2	84	32.898	Ovis_aries
WBGene00019498	K07E8.7	97	34.663	ENSPPAG00000032874	RPUSD2	74	35.162	Pan_paniscus
WBGene00019498	K07E8.7	97	34.988	ENSPPRG00000010446	RPUSD2	74	35.484	Panthera_pardus
WBGene00019498	K07E8.7	97	34.988	ENSPTIG00000013316	RPUSD2	85	33.836	Panthera_tigris_altaica
WBGene00019498	K07E8.7	97	34.663	ENSPTRG00000006924	RPUSD2	74	35.162	Pan_troglodytes
WBGene00019498	K07E8.7	97	34.988	ENSPANG00000019339	RPUSD2	74	35.484	Papio_anubis
WBGene00019498	K07E8.7	80	34.006	ENSPSIG00000012680	RPUSD2	99	34.006	Pelodiscus_sinensis
WBGene00019498	K07E8.7	97	36.413	ENSPMGG00000018165	rpusd2	69	36.413	Periophthalmus_magnuspinnatus
WBGene00019498	K07E8.7	97	36.272	ENSPEMG00000012878	Rpusd2	74	36.272	Peromyscus_maniculatus_bairdii
WBGene00019498	K07E8.7	97	36.461	ENSPCIG00000023199	RPUSD2	72	36.461	Phascolarctos_cinereus
WBGene00019498	K07E8.7	97	35.623	ENSPFOG00000006829	rpusd2	72	35.623	Poecilia_formosa
WBGene00019498	K07E8.7	97	35.623	ENSPLAG00000022914	rpusd2	81	35.623	Poecilia_latipinna
WBGene00019498	K07E8.7	97	35.623	ENSPMEG00000009835	rpusd2	81	35.623	Poecilia_mexicana
WBGene00019498	K07E8.7	97	36.132	ENSPREG00000016441	rpusd2	69	36.132	Poecilia_reticulata
WBGene00019498	K07E8.7	98	34.483	ENSPPYG00000006355	RPUSD2	74	34.483	Pongo_abelii
WBGene00019498	K07E8.7	97	35.236	ENSPCOG00000028019	RPUSD2	74	35.236	Propithecus_coquereli
WBGene00019498	K07E8.7	97	35.236	ENSPVAG00000001837	RPUSD2	74	35.236	Pteropus_vampyrus
WBGene00019498	K07E8.7	97	35.219	ENSPNYG00000021507	rpusd2	79	35.219	Pundamilia_nyererei
WBGene00019498	K07E8.7	97	35.606	ENSRNOG00000046797	Rpusd2	72	35.606	Rattus_norvegicus
WBGene00019498	K07E8.7	97	35.606	ENSRNOG00000010528	LOC100911166	72	35.606	Rattus_norvegicus
WBGene00019498	K07E8.7	97	35.236	ENSRBIG00000030813	RPUSD2	74	35.732	Rhinopithecus_bieti
WBGene00019498	K07E8.7	97	34.988	ENSRROG00000026664	RPUSD2	74	35.484	Rhinopithecus_roxellana
WBGene00019498	K07E8.7	98	31.538	YOL066C	RIB2	63	31.527	Saccharomyces_cerevisiae
WBGene00019498	K07E8.7	98	34.527	YDL036C	-	79	34.527	Saccharomyces_cerevisiae
WBGene00019498	K07E8.7	97	35.411	ENSSBOG00000035031	RPUSD2	74	35.910	Saimiri_boliviensis_boliviensis
WBGene00019498	K07E8.7	80	35.522	ENSSHAG00000015108	RPUSD2	89	35.522	Sarcophilus_harrisii
WBGene00019498	K07E8.7	75	42.049	ENSSFOG00015019057	rpusd2	51	38.484	Scleropages_formosus
WBGene00019498	K07E8.7	75	41.754	ENSSMAG00000000903	rpusd2	54	41.754	Scophthalmus_maximus
WBGene00019498	K07E8.7	97	35.236	ENSSARG00000002792	RPUSD2	74	35.236	Sorex_araneus
WBGene00019498	K07E8.7	97	34.634	ENSSPUG00000001206	RPUSD2	81	34.634	Sphenodon_punctatus
WBGene00019498	K07E8.7	75	41.053	ENSSPAG00000003578	rpusd2	50	41.053	Stegastes_partitus
WBGene00019498	K07E8.7	97	34.257	ENSSSCG00000036700	RPUSD2	72	34.761	Sus_scrofa
WBGene00019498	K07E8.7	75	42.456	ENSTRUG00000025880	rpusd2	66	37.500	Takifugu_rubripes
WBGene00019498	K07E8.7	97	35.627	ENSTNIG00000017329	rpusd2	81	35.627	Tetraodon_nigroviridis
WBGene00019498	K07E8.7	97	34.328	ENSTTRG00000010585	RPUSD2	74	34.328	Tursiops_truncatus
WBGene00019498	K07E8.7	97	34.739	ENSUAMG00000001470	RPUSD2	78	35.484	Ursus_americanus
WBGene00019498	K07E8.7	97	34.739	ENSUMAG00000012487	RPUSD2	65	35.484	Ursus_maritimus
WBGene00019498	K07E8.7	97	35.088	ENSVPAG00000003844	RPUSD2	73	35.088	Vicugna_pacos
WBGene00019498	K07E8.7	97	34.739	ENSVVUG00000026590	RPUSD2	83	33.333	Vulpes_vulpes
WBGene00019498	K07E8.7	97	35.135	ENSXETG00000015973	rpusd2	95	34.009	Xenopus_tropicalis
WBGene00019498	K07E8.7	97	35.567	ENSXMAG00000021821	rpusd2	81	35.567	Xiphophorus_maculatus