EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00019678 (Gene tree)
Gene ID: -
Gene Symbol: K12H4.3
Alias: -
Full Name: Ribosome biogenesis protein BRX1 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1579 bases
Position: chrIII:8046034-8047612
Accession: P34524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
K12H4	Brix	PF04427.18	3.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
K12H4.3	-	1186	NM_066355	K12H4.3	352 (aa)	NP_498756	P34524

Gene Model

Click here to download WBGene00019678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00019678's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00019678	K12H4.3	61	55.869	ENSG00000113460	BRIX1	60	55.869	Homo_sapiens
WBGene00019678	K12H4.3	74	49.077	ENSAPOG00000020334	bxdc2	78	48.881	Acanthochromis_polyacanthus
WBGene00019678	K12H4.3	71	51.190	ENSAMEG00000003295	BRIX1	76	49.630	Ailuropoda_melanoleuca
WBGene00019678	K12H4.3	69	52.049	ENSACIG00000017003	bxdc2	72	52.049	Amphilophus_citrinellus
WBGene00019678	K12H4.3	87	45.714	ENSAOCG00000000941	bxdc2	78	49.254	Amphiprion_ocellaris
WBGene00019678	K12H4.3	87	45.714	ENSAPEG00000017124	bxdc2	80	48.540	Amphiprion_percula
WBGene00019678	K12H4.3	78	45.230	ENSATEG00000016635	bxdc2	70	50.826	Anabas_testudineus
WBGene00019678	K12H4.3	70	44.490	ENSAPLG00000006647	BRIX1	82	44.490	Anas_platyrhynchos
WBGene00019678	K12H4.3	61	55.869	ENSACAG00000008586	BRIX1	60	55.869	Anolis_carolinensis
WBGene00019678	K12H4.3	71	48.473	ENSANAG00000022329	-	72	48.473	Aotus_nancymaae
WBGene00019678	K12H4.3	57	51.256	ENSANAG00000010505	-	59	51.256	Aotus_nancymaae
WBGene00019678	K12H4.3	82	46.713	ENSACLG00000005213	bxdc2	73	50.397	Astatotilapia_calliptera
WBGene00019678	K12H4.3	71	51.600	ENSAMXG00000043121	bxdc2	73	51.587	Astyanax_mexicanus
WBGene00019678	K12H4.3	81	47.203	ENSBTAG00000019211	BRIX1	71	50.794	Bos_taurus
WBGene00019678	K12H4.3	60	55.189	ENSCJAG00000007390	-	60	55.189	Callithrix_jacchus
WBGene00019678	K12H4.3	81	45.804	ENSCJAG00000018506	-	81	45.804	Callithrix_jacchus
WBGene00019678	K12H4.3	83	44.746	ENSCAFG00000018797	BRIX1	76	48.889	Canis_familiaris
WBGene00019678	K12H4.3	71	46.032	ENSCAFG00020016783	BRIX1	75	44.815	Canis_lupus_dingo
WBGene00019678	K12H4.3	71	47.619	ENSCHIG00000015024	BRIX1	70	47.619	Capra_hircus
WBGene00019678	K12H4.3	61	55.869	ENSTSYG00000002898	BRIX1	60	55.869	Carlito_syrichta
WBGene00019678	K12H4.3	61	43.662	ENSCAPG00000009776	BRIX1	65	43.662	Cavia_aperea
WBGene00019678	K12H4.3	69	51.429	ENSCPOG00000022064	BRIX1	61	56.338	Cavia_porcellus
WBGene00019678	K12H4.3	71	50.000	ENSCCAG00000033405	BRIX1	71	50.000	Cebus_capucinus
WBGene00019678	K12H4.3	61	55.869	ENSCATG00000037721	BRIX1	60	55.869	Cercocebus_atys
WBGene00019678	K12H4.3	61	56.338	ENSCLAG00000008124	BRIX1	60	56.338	Chinchilla_lanigera
WBGene00019678	K12H4.3	61	55.399	ENSCSAG00000017117	BRIX1	60	55.399	Chlorocebus_sabaeus
WBGene00019678	K12H4.3	71	49.600	ENSCHOG00000001790	-	76	48.148	Choloepus_hoffmanni
WBGene00019678	K12H4.3	60	44.762	ENSCHOG00000012227	-	59	44.762	Choloepus_hoffmanni
WBGene00019678	K12H4.3	71	50.397	ENSCPBG00000021309	BRIX1	72	50.397	Chrysemys_picta_bellii
WBGene00019678	K12H4.3	65	48.246	ENSCING00000001695	-	86	48.246	Ciona_intestinalis
WBGene00019678	K12H4.3	65	50.870	ENSCSAVG00000008644	-	75	50.870	Ciona_savignyi
WBGene00019678	K12H4.3	61	55.869	ENSCANG00000022969	BRIX1	70	50.397	Colobus_angolensis_palliatus
WBGene00019678	K12H4.3	89	44.514	ENSCGRG00001007932	Brix1	76	49.077	Cricetulus_griseus_chok1gshd
WBGene00019678	K12H4.3	89	44.514	ENSCGRG00000016743	Brix1	76	49.077	Cricetulus_griseus_crigri
WBGene00019678	K12H4.3	77	48.162	ENSCSEG00000019821	bxdc2	71	51.230	Cynoglossus_semilaevis
WBGene00019678	K12H4.3	60	55.714	ENSCVAG00000016942	bxdc2	71	50.410	Cyprinodon_variegatus
WBGene00019678	K12H4.3	61	57.407	ENSDARG00000098935	bxdc2	55	57.746	Danio_rerio
WBGene00019678	K12H4.3	69	51.020	ENSDNOG00000002878	BRIX1	76	48.519	Dasypus_novemcinctus
WBGene00019678	K12H4.3	69	51.020	ENSDORG00000009369	Brix1	69	51.020	Dipodomys_ordii
WBGene00019678	K12H4.3	63	52.889	FBgn0035524	CG11583	82	43.974	Drosophila_melanogaster
WBGene00019678	K12H4.3	60	52.830	ENSETEG00000017329	-	59	52.830	Echinops_telfairi
WBGene00019678	K12H4.3	61	52.778	ENSETEG00000017842	-	61	53.052	Echinops_telfairi
WBGene00019678	K12H4.3	61	54.419	ENSEBUG00000007717	BRIX1	70	53.812	Eptatretus_burgeri
WBGene00019678	K12H4.3	71	51.190	ENSEASG00005014968	BRIX1	76	49.630	Equus_asinus_asinus
WBGene00019678	K12H4.3	71	51.190	ENSECAG00000000377	BRIX1	65	51.190	Equus_caballus
WBGene00019678	K12H4.3	73	44.961	ENSEEUG00000008350	BRIX1	71	44.961	Erinaceus_europaeus
WBGene00019678	K12H4.3	65	51.304	ENSELUG00000009050	bxdc2	70	49.206	Esox_lucius
WBGene00019678	K12H4.3	71	51.190	ENSFCAG00000042465	BRIX1	71	51.190	Felis_catus
WBGene00019678	K12H4.3	70	52.033	ENSFALG00000002106	BRIX1	67	52.033	Ficedula_albicollis
WBGene00019678	K12H4.3	70	52.245	ENSFDAG00000018960	BRIX1	60	57.277	Fukomys_damarensis
WBGene00019678	K12H4.3	75	50.000	ENSFHEG00000004488	bxdc2	67	52.174	Fundulus_heteroclitus
WBGene00019678	K12H4.3	73	50.388	ENSGMOG00000002425	bxdc2	89	50.388	Gadus_morhua
WBGene00019678	K12H4.3	71	49.603	ENSGALG00000003373	BRIX1	72	49.603	Gallus_gallus
WBGene00019678	K12H4.3	74	48.327	ENSGAFG00000011947	bxdc2	70	52.066	Gambusia_affinis
WBGene00019678	K12H4.3	76	46.953	ENSGACG00000016491	bxdc2	74	50.000	Gasterosteus_aculeatus
WBGene00019678	K12H4.3	61	55.093	ENSGAGG00000011959	BRIX1	62	55.093	Gopherus_agassizii
WBGene00019678	K12H4.3	61	55.869	ENSGGOG00000004225	BRIX1	60	55.869	Gorilla_gorilla
WBGene00019678	K12H4.3	82	46.713	ENSHBUG00000017923	bxdc2	73	50.397	Haplochromis_burtoni
WBGene00019678	K12H4.3	69	38.843	ENSHGLG00000010349	-	58	41.905	Heterocephalus_glaber_female
WBGene00019678	K12H4.3	80	47.535	ENSHGLG00000004566	BRIX1	71	51.190	Heterocephalus_glaber_female
WBGene00019678	K12H4.3	70	39.676	ENSHGLG00000017782	-	59	42.723	Heterocephalus_glaber_female
WBGene00019678	K12H4.3	60	44.762	ENSHGLG00000000296	-	57	44.762	Heterocephalus_glaber_female
WBGene00019678	K12H4.3	60	41.429	ENSHGLG00000002055	-	54	41.429	Heterocephalus_glaber_female
WBGene00019678	K12H4.3	60	51.905	ENSHGLG00100000068	-	59	51.905	Heterocephalus_glaber_male
WBGene00019678	K12H4.3	80	47.535	ENSHGLG00100002204	-	71	51.190	Heterocephalus_glaber_male
WBGene00019678	K12H4.3	71	37.052	ENSHGLG00100001527	-	64	37.052	Heterocephalus_glaber_male
WBGene00019678	K12H4.3	73	49.805	ENSHCOG00000011674	bxdc2	74	49.805	Hippocampus_comes
WBGene00019678	K12H4.3	61	55.869	ENSIPUG00000015099	brix1	61	55.869	Ictalurus_punctatus
WBGene00019678	K12H4.3	61	54.930	ENSSTOG00000009600	BRIX1	60	54.930	Ictidomys_tridecemlineatus
WBGene00019678	K12H4.3	59	51.456	ENSJJAG00000009708	-	61	51.456	Jaculus_jaculus
WBGene00019678	K12H4.3	59	55.981	ENSJJAG00000001806	-	79	55.981	Jaculus_jaculus
WBGene00019678	K12H4.3	70	46.341	ENSJJAG00000001423	-	59	51.196	Jaculus_jaculus
WBGene00019678	K12H4.3	71	44.841	ENSJJAG00000004662	-	69	44.841	Jaculus_jaculus
WBGene00019678	K12H4.3	69	52.066	ENSKMAG00000014487	bxdc2	74	50.195	Kryptolebias_marmoratus
WBGene00019678	K12H4.3	82	45.675	ENSLBEG00000018123	bxdc2	74	47.471	Labrus_bergylta
WBGene00019678	K12H4.3	65	53.478	ENSLACG00000005971	BRIX1	66	53.478	Latimeria_chalumnae
WBGene00019678	K12H4.3	81	46.259	ENSLOCG00000011774	bxdc2	73	50.794	Lepisosteus_oculatus
WBGene00019678	K12H4.3	80	47.183	ENSLAFG00000007249	BRIX1	71	50.794	Loxodonta_africana
WBGene00019678	K12H4.3	61	55.869	ENSMFAG00000033107	BRIX1	60	55.869	Macaca_fascicularis
WBGene00019678	K12H4.3	61	55.869	ENSMMUG00000038794	BRIX1	60	55.869	Macaca_mulatta
WBGene00019678	K12H4.3	61	55.869	ENSMNEG00000039324	BRIX1	60	55.869	Macaca_nemestrina
WBGene00019678	K12H4.3	61	55.869	ENSMLEG00000041564	BRIX1	60	55.869	Mandrillus_leucophaeus
WBGene00019678	K12H4.3	82	47.059	ENSMAMG00000015004	bxdc2	80	47.312	Mastacembelus_armatus
WBGene00019678	K12H4.3	82	46.713	ENSMZEG00005019808	bxdc2	73	50.397	Maylandia_zebra
WBGene00019678	K12H4.3	80	47.387	ENSMAUG00000014172	Brix1	84	50.794	Mesocricetus_auratus
WBGene00019678	K12H4.3	83	45.424	ENSMICG00000005672	BRIX1	60	56.338	Microcebus_murinus
WBGene00019678	K12H4.3	70	51.429	ENSMOCG00000018798	Brix1	60	56.338	Microtus_ochrogaster
WBGene00019678	K12H4.3	69	52.459	ENSMMOG00000000861	bxdc2	71	52.459	Mola_mola
WBGene00019678	K12H4.3	72	50.394	ENSMODG00000020386	BRIX1	71	50.394	Monodelphis_domestica
WBGene00019678	K12H4.3	88	41.139	ENSMALG00000020437	bxdc2	69	47.541	Monopterus_albus
WBGene00019678	K12H4.3	68	52.227	MGP_CAROLIEiJ_G0019665	Brix1	65	53.879	Mus_caroli
WBGene00019678	K12H4.3	68	52.227	ENSMUSG00000022247	Brix1	65	53.879	Mus_musculus
WBGene00019678	K12H4.3	68	52.227	MGP_SPRETEiJ_G0020562	Brix1	65	53.879	Mus_spretus
WBGene00019678	K12H4.3	71	51.587	ENSMPUG00000015137	BRIX1	71	51.587	Mustela_putorius_furo
WBGene00019678	K12H4.3	60	56.190	ENSMLUG00000029255	BRIX1	86	53.712	Myotis_lucifugus
WBGene00019678	K12H4.3	69	51.020	ENSNGAG00000021812	-	69	51.020	Nannospalax_galili
WBGene00019678	K12H4.3	82	45.578	ENSNGAG00000002585	-	71	50.612	Nannospalax_galili
WBGene00019678	K12H4.3	82	46.713	ENSNBRG00000008850	bxdc2	70	50.397	Neolamprologus_brichardi
WBGene00019678	K12H4.3	61	52.582	ENSNLEG00000032149	BRIX1	58	52.582	Nomascus_leucogenys
WBGene00019678	K12H4.3	58	50.490	ENSMEUG00000016482	BRIX1	57	50.490	Notamacropus_eugenii
WBGene00019678	K12H4.3	50	58.192	ENSOPRG00000012886	BRIX1	88	58.192	Ochotona_princeps
WBGene00019678	K12H4.3	59	48.804	ENSODEG00000010997	-	59	48.804	Octodon_degus
WBGene00019678	K12H4.3	61	56.808	ENSODEG00000019171	-	73	56.808	Octodon_degus
WBGene00019678	K12H4.3	82	46.713	ENSONIG00000007725	bxdc2	72	50.397	Oreochromis_niloticus
WBGene00019678	K12H4.3	61	56.338	ENSOANG00000014525	-	85	50.388	Ornithorhynchus_anatinus
WBGene00019678	K12H4.3	61	57.277	ENSOCUG00000014478	BRIX1	71	51.587	Oryctolagus_cuniculus
WBGene00019678	K12H4.3	69	51.639	ENSORLG00000005895	bxdc2	72	51.639	Oryzias_latipes
WBGene00019678	K12H4.3	69	51.639	ENSORLG00020005201	bxdc2	72	51.639	Oryzias_latipes_hni
WBGene00019678	K12H4.3	69	51.230	ENSORLG00015011685	bxdc2	72	51.230	Oryzias_latipes_hsok
WBGene00019678	K12H4.3	61	54.167	ENSOMEG00000007680	bxdc2	68	51.304	Oryzias_melastigma
WBGene00019678	K12H4.3	64	54.185	ENSOGAG00000014827	BRIX1	64	54.185	Otolemur_garnettii
WBGene00019678	K12H4.3	71	50.397	ENSOARG00000011539	BRIX1	71	50.397	Ovis_aries
WBGene00019678	K12H4.3	61	55.869	ENSPPAG00000038183	BRIX1	60	55.869	Pan_paniscus
WBGene00019678	K12H4.3	71	51.190	ENSPPRG00000023961	BRIX1	71	51.190	Panthera_pardus
WBGene00019678	K12H4.3	71	51.190	ENSPTIG00000006466	BRIX1	71	51.190	Panthera_tigris_altaica
WBGene00019678	K12H4.3	61	55.869	ENSPTRG00000016784	BRIX1	60	55.869	Pan_troglodytes
WBGene00019678	K12H4.3	61	55.869	ENSPANG00000016504	BRIX1	59	55.869	Papio_anubis
WBGene00019678	K12H4.3	61	55.399	ENSPKIG00000005920	bxdc2	53	55.399	Paramormyrops_kingsleyae
WBGene00019678	K12H4.3	55	54.639	ENSPSIG00000011219	BRIX1	70	54.639	Pelodiscus_sinensis
WBGene00019678	K12H4.3	88	39.297	ENSPMGG00000022988	bxdc2	73	43.969	Periophthalmus_magnuspinnatus
WBGene00019678	K12H4.3	88	44.860	ENSPEMG00000016920	Brix1	76	49.077	Peromyscus_maniculatus_bairdii
WBGene00019678	K12H4.3	72	51.181	ENSPCIG00000022778	BRIX1	77	49.635	Phascolarctos_cinereus
WBGene00019678	K12H4.3	78	47.350	ENSPFOG00000008577	bxdc2	60	51.984	Poecilia_formosa
WBGene00019678	K12H4.3	78	46.996	ENSPLAG00000006772	bxdc2	67	51.587	Poecilia_latipinna
WBGene00019678	K12H4.3	78	47.350	ENSPMEG00000020229	bxdc2	67	51.984	Poecilia_mexicana
WBGene00019678	K12H4.3	78	46.416	ENSPREG00000017461	bxdc2	64	52.479	Poecilia_reticulata
WBGene00019678	K12H4.3	61	53.991	ENSPPYG00000015390	BRIX1	60	53.991	Pongo_abelii
WBGene00019678	K12H4.3	60	43.810	ENSPCOG00000016748	-	62	43.810	Propithecus_coquereli
WBGene00019678	K12H4.3	83	45.085	ENSPCOG00000018281	-	83	45.085	Propithecus_coquereli
WBGene00019678	K12H4.3	83	43.051	ENSPVAG00000016925	BRIX1	84	48.413	Pteropus_vampyrus
WBGene00019678	K12H4.3	82	46.713	ENSPNYG00000007707	bxdc2	73	50.397	Pundamilia_nyererei
WBGene00019678	K12H4.3	84	45.395	ENSPNAG00000010431	bxdc2	72	50.794	Pygocentrus_nattereri
WBGene00019678	K12H4.3	80	46.316	ENSRNOG00000018021	Brix1	71	50.794	Rattus_norvegicus
WBGene00019678	K12H4.3	61	55.399	ENSRBIG00000042083	BRIX1	59	55.399	Rhinopithecus_bieti
WBGene00019678	K12H4.3	61	55.869	ENSRROG00000031228	BRIX1	59	55.869	Rhinopithecus_roxellana
WBGene00019678	K12H4.3	63	44.444	YOL077C	-	80	44.444	Saccharomyces_cerevisiae
WBGene00019678	K12H4.3	71	50.397	ENSSBOG00000033290	-	71	50.397	Saimiri_boliviensis_boliviensis
WBGene00019678	K12H4.3	71	49.603	ENSSBOG00000017845	-	71	49.603	Saimiri_boliviensis_boliviensis
WBGene00019678	K12H4.3	72	50.588	ENSSHAG00000010794	BRIX1	72	50.588	Sarcophilus_harrisii
WBGene00019678	K12H4.3	67	51.899	ENSSFOG00015022435	brix1	69	51.899	Scleropages_formosus
WBGene00019678	K12H4.3	87	43.038	ENSSMAG00000005909	bxdc2	75	49.027	Scophthalmus_maximus
WBGene00019678	K12H4.3	82	46.021	ENSSDUG00000016234	bxdc2	71	50.397	Seriola_dumerili
WBGene00019678	K12H4.3	82	46.021	ENSSLDG00000007044	bxdc2	74	49.027	Seriola_lalandi_dorsalis
WBGene00019678	K12H4.3	61	54.930	ENSSARG00000009879	BRIX1	59	54.930	Sorex_araneus
WBGene00019678	K12H4.3	71	49.603	ENSSPUG00000000011	-	73	49.603	Sphenodon_punctatus
WBGene00019678	K12H4.3	71	50.397	ENSSPUG00000019166	-	84	50.397	Sphenodon_punctatus
WBGene00019678	K12H4.3	88	44.136	ENSSPAG00000006309	bxdc2	77	49.621	Stegastes_partitus
WBGene00019678	K12H4.3	71	50.794	ENSSSCG00000016827	BRIX1	75	49.259	Sus_scrofa
WBGene00019678	K12H4.3	70	52.846	ENSTGUG00000001961	BRIX1	70	52.846	Taeniopygia_guttata
WBGene00019678	K12H4.3	70	50.996	ENSTRUG00000011403	bxdc2	73	50.996	Takifugu_rubripes
WBGene00019678	K12H4.3	77	48.214	ENSTNIG00000007517	bxdc2	72	50.996	Tetraodon_nigroviridis
WBGene00019678	K12H4.3	69	47.347	ENSTBEG00000011652	BRIX1	81	47.347	Tupaia_belangeri
WBGene00019678	K12H4.3	71	50.794	ENSTTRG00000003262	BRIX1	71	50.794	Tursiops_truncatus
WBGene00019678	K12H4.3	71	44.314	ENSUAMG00000022481	BRIX1	70	44.269	Ursus_americanus
WBGene00019678	K12H4.3	71	51.190	ENSUMAG00000012900	BRIX1	76	49.630	Ursus_maritimus
WBGene00019678	K12H4.3	83	41.695	ENSVVUG00000022099	BRIX1	70	46.825	Vulpes_vulpes
WBGene00019678	K12H4.3	65	53.913	ENSXETG00000000703	brix1	68	53.913	Xenopus_tropicalis
WBGene00019678	K12H4.3	69	52.049	ENSXCOG00000002461	bxdc2	71	52.049	Xiphophorus_couchianus
WBGene00019678	K12H4.3	79	46.102	ENSXMAG00000004284	bxdc2	61	52.049	Xiphophorus_maculatus