EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00019698 (Gene tree)
Gene ID: -
Gene Symbol: riok-1
Alias: -
Full Name: Serine/threonine-protein kinase RIO1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 11275 bases
Position: chrI:3085011-3096285
Accession: O44959
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
M01B12	RIO1	PF01163.22	2.3e-75	1	1
M01B12	RIO1	PF01163.22	2.3e-75	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
M01B12.5b	-	2240	NR_132555	-	- (aa)	-	-
M01B12.5a.1	-	2110	NM_001026399	M01B12.5a.1	506 (aa)	NP_001021570	O44959
M01B12.5a.2	-	2043	NM_001026399	M01B12.5a.2	506 (aa)	NP_001021570	O44959

Gene Model

Click here to download WBGene00019698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00019698's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00019698	riok-1	77	49.767	ENSG00000124784	RIOK1	78	48.115	Homo_sapiens
WBGene00019698	riok-1	56	41.391	ENSAPOG00000015632	riok1	93	42.384	Acanthochromis_polyacanthus
WBGene00019698	riok-1	77	51.683	ENSAMEG00000017367	RIOK1	78	48.786	Ailuropoda_melanoleuca
WBGene00019698	riok-1	86	46.272	ENSACIG00000003735	riok1	78	46.889	Amphilophus_citrinellus
WBGene00019698	riok-1	85	48.330	ENSAOCG00000011818	riok1	79	48.444	Amphiprion_ocellaris
WBGene00019698	riok-1	85	48.330	ENSAPEG00000001345	riok1	79	48.444	Amphiprion_percula
WBGene00019698	riok-1	80	47.733	ENSATEG00000006594	riok1	89	46.729	Anabas_testudineus
WBGene00019698	riok-1	77	49.756	ENSAPLG00000004196	RIOK1	86	49.756	Anas_platyrhynchos
WBGene00019698	riok-1	84	47.761	ENSACAG00000000695	RIOK1	81	48.246	Anolis_carolinensis
WBGene00019698	riok-1	77	43.885	ENSANAG00000023777	RIOK1	77	41.907	Aotus_nancymaae
WBGene00019698	riok-1	85	48.222	ENSACLG00000015799	riok1	79	48.222	Astatotilapia_calliptera
WBGene00019698	riok-1	85	48.043	ENSAMXG00000015286	riok1	88	45.224	Astyanax_mexicanus
WBGene00019698	riok-1	85	46.694	ENSBTAG00000013821	RIOK1	81	48.268	Bos_taurus
WBGene00019698	riok-1	77	50.000	ENSCJAG00000042960	RIOK1	78	48.337	Callithrix_jacchus
WBGene00019698	riok-1	85	46.855	ENSCAFG00000009563	RIOK1	82	46.552	Canis_familiaris
WBGene00019698	riok-1	67	50.949	ENSCAFG00020013233	RIOK1	66	50.949	Canis_lupus_dingo
WBGene00019698	riok-1	85	47.323	ENSCHIG00000001534	RIOK1	81	47.835	Capra_hircus
WBGene00019698	riok-1	68	47.074	ENSTSYG00000011368	RIOK1	94	47.514	Carlito_syrichta
WBGene00019698	riok-1	76	48.426	ENSCAPG00000008489	RIOK1	95	47.450	Cavia_aperea
WBGene00019698	riok-1	76	49.153	ENSCPOG00000009882	RIOK1	78	47.894	Cavia_porcellus
WBGene00019698	riok-1	77	49.302	ENSCCAG00000024061	RIOK1	78	47.672	Cebus_capucinus
WBGene00019698	riok-1	77	50.000	ENSCATG00000001548	RIOK1	78	48.337	Cercocebus_atys
WBGene00019698	riok-1	77	50.597	ENSCLAG00000003522	RIOK1	78	48.337	Chinchilla_lanigera
WBGene00019698	riok-1	74	48.792	ENSCSAG00000007396	RIOK1	65	52.381	Chlorocebus_sabaeus
WBGene00019698	riok-1	64	53.314	ENSCPBG00000008685	RIOK1	64	51.762	Chrysemys_picta_bellii
WBGene00019698	riok-1	77	50.000	ENSCANG00000032919	RIOK1	78	48.337	Colobus_angolensis_palliatus
WBGene00019698	riok-1	85	46.269	ENSCGRG00001018868	Riok1	79	46.813	Cricetulus_griseus_chok1gshd
WBGene00019698	riok-1	85	46.269	ENSCGRG00000008015	Riok1	79	46.813	Cricetulus_griseus_crigri
WBGene00019698	riok-1	77	38.987	ENSCSEG00000015014	riok1	70	38.670	Cynoglossus_semilaevis
WBGene00019698	riok-1	56	41.558	ENSCVAG00000011291	riok1	95	42.208	Cyprinodon_variegatus
WBGene00019698	riok-1	86	45.567	ENSDARG00000016399	riok1	86	45.918	Danio_rerio
WBGene00019698	riok-1	77	50.721	ENSDNOG00000015813	RIOK1	72	50.483	Dasypus_novemcinctus
WBGene00019698	riok-1	77	49.412	ENSDORG00000008530	Riok1	78	47.672	Dipodomys_ordii
WBGene00019698	riok-1	76	48.804	FBgn0036187	RIOK1	70	48.792	Drosophila_melanogaster
WBGene00019698	riok-1	86	46.336	ENSETEG00000020273	RIOK1	80	46.389	Echinops_telfairi
WBGene00019698	riok-1	77	49.392	ENSEBUG00000013672	riok1	72	49.392	Eptatretus_burgeri
WBGene00019698	riok-1	67	53.073	ENSEASG00005012032	RIOK1	62	53.073	Equus_asinus_asinus
WBGene00019698	riok-1	85	47.357	ENSECAG00000009007	RIOK1	78	47.903	Equus_caballus
WBGene00019698	riok-1	64	44.932	ENSEEUG00000007123	RIOK1	69	49.508	Erinaceus_europaeus
WBGene00019698	riok-1	77	50.694	ENSFCAG00000027290	RIOK1	78	48.018	Felis_catus
WBGene00019698	riok-1	77	51.683	ENSFALG00000013244	RIOK1	73	50.243	Ficedula_albicollis
WBGene00019698	riok-1	85	49.781	ENSFDAG00000019139	RIOK1	78	49.224	Fukomys_damarensis
WBGene00019698	riok-1	65	54.412	ENSFHEG00000021419	riok1	73	55.814	Fundulus_heteroclitus
WBGene00019698	riok-1	63	53.453	ENSGMOG00000018668	riok1	96	48.698	Gadus_morhua
WBGene00019698	riok-1	59	42.236	ENSGALG00000012795	RIOK1	97	41.066	Gallus_gallus
WBGene00019698	riok-1	84	47.427	ENSGACG00000002496	riok1	93	46.392	Gasterosteus_aculeatus
WBGene00019698	riok-1	67	51.762	ENSGAGG00000002262	RIOK1	79	51.762	Gopherus_agassizii
WBGene00019698	riok-1	77	49.616	ENSGGOG00000011037	RIOK1	56	57.877	Gorilla_gorilla
WBGene00019698	riok-1	77	52.078	ENSHGLG00000008699	RIOK1	72	51.079	Heterocephalus_glaber_female
WBGene00019698	riok-1	77	52.078	ENSHGLG00100008188	RIOK1	72	51.079	Heterocephalus_glaber_male
WBGene00019698	riok-1	85	47.758	ENSHCOG00000013275	riok1	89	45.493	Hippocampus_comes
WBGene00019698	riok-1	86	47.648	ENSIPUG00000003290	riok1	77	50.562	Ictalurus_punctatus
WBGene00019698	riok-1	84	45.798	ENSSTOG00000009289	RIOK1	81	46.739	Ictidomys_tridecemlineatus
WBGene00019698	riok-1	77	50.242	ENSJJAG00000015152	Riok1	78	47.545	Jaculus_jaculus
WBGene00019698	riok-1	61	55.556	ENSKMAG00000019378	riok1	84	55.556	Kryptolebias_marmoratus
WBGene00019698	riok-1	78	49.153	ENSLBEG00000016650	riok1	78	46.889	Labrus_bergylta
WBGene00019698	riok-1	75	45.679	ENSLACG00000000300	RIOK1	70	45.000	Latimeria_chalumnae
WBGene00019698	riok-1	85	46.548	ENSLOCG00000011728	riok1	86	45.062	Lepisosteus_oculatus
WBGene00019698	riok-1	77	49.881	ENSLAFG00000005504	RIOK1	80	47.894	Loxodonta_africana
WBGene00019698	riok-1	77	50.000	ENSMFAG00000029990	RIOK1	78	48.337	Macaca_fascicularis
WBGene00019698	riok-1	77	49.767	ENSMMUG00000015577	RIOK1	78	48.115	Macaca_mulatta
WBGene00019698	riok-1	85	48.438	ENSMNEG00000034396	RIOK1	75	52.778	Macaca_nemestrina
WBGene00019698	riok-1	77	50.000	ENSMLEG00000026327	RIOK1	78	48.337	Mandrillus_leucophaeus
WBGene00019698	riok-1	86	44.742	ENSMAMG00000019557	riok1	86	45.021	Mastacembelus_armatus
WBGene00019698	riok-1	85	48.222	ENSMZEG00005019482	riok1	79	48.222	Maylandia_zebra
WBGene00019698	riok-1	85	47.807	ENSMGAG00000003816	RIOK1	78	46.785	Meleagris_gallopavo
WBGene00019698	riok-1	85	47.149	ENSMAUG00000012751	Riok1	78	46.681	Mesocricetus_auratus
WBGene00019698	riok-1	77	50.121	ENSMICG00000044301	RIOK1	61	50.365	Microcebus_murinus
WBGene00019698	riok-1	85	45.648	ENSMOCG00000017032	Riok1	79	46.460	Microtus_ochrogaster
WBGene00019698	riok-1	77	46.744	ENSMMOG00000020598	riok1	67	50.678	Mola_mola
WBGene00019698	riok-1	85	47.280	ENSMODG00000009964	RIOK1	81	48.043	Monodelphis_domestica
WBGene00019698	riok-1	75	46.410	ENSMALG00000019982	riok1	74	46.923	Monopterus_albus
WBGene00019698	riok-1	85	46.421	MGP_CAROLIEiJ_G0018439	Riok1	78	46.239	Mus_caroli
WBGene00019698	riok-1	85	46.325	ENSMUSG00000021428	Riok1	81	50.867	Mus_musculus
WBGene00019698	riok-1	88	44.024	MGP_PahariEiJ_G0019507	Riok1	89	44.071	Mus_pahari
WBGene00019698	riok-1	85	46.389	MGP_SPRETEiJ_G0019319	Riok1	78	46.239	Mus_spretus
WBGene00019698	riok-1	85	47.992	ENSMPUG00000000570	RIOK1	81	48.060	Mustela_putorius_furo
WBGene00019698	riok-1	77	50.119	ENSMLUG00000015312	RIOK1	73	49.637	Myotis_lucifugus
WBGene00019698	riok-1	77	51.095	ENSNGAG00000021734	Riok1	78	48.559	Nannospalax_galili
WBGene00019698	riok-1	65	53.959	ENSNBRG00000017489	riok1	64	53.959	Neolamprologus_brichardi
WBGene00019698	riok-1	85	44.944	ENSNLEG00000011621	RIOK1	79	42.384	Nomascus_leucogenys
WBGene00019698	riok-1	56	50.338	ENSOPRG00000009524	RIOK1	88	47.321	Ochotona_princeps
WBGene00019698	riok-1	85	48.222	ENSONIG00000014010	riok1	78	47.894	Oreochromis_niloticus
WBGene00019698	riok-1	77	51.707	ENSOANG00000012553	RIOK1	88	51.951	Ornithorhynchus_anatinus
WBGene00019698	riok-1	77	48.837	ENSOCUG00000011824	RIOK1	72	50.122	Oryctolagus_cuniculus
WBGene00019698	riok-1	86	48.451	ENSORLG00000008221	riok1	79	48.546	Oryzias_latipes
WBGene00019698	riok-1	85	48.770	ENSORLG00015009817	riok1	78	49.099	Oryzias_latipes_hsok
WBGene00019698	riok-1	85	48.993	ENSOMEG00000002758	riok1	72	49.224	Oryzias_melastigma
WBGene00019698	riok-1	85	47.321	ENSOGAG00000010192	RIOK1	78	46.563	Otolemur_garnettii
WBGene00019698	riok-1	85	47.752	ENSOARG00000017747	RIOK1	81	48.268	Ovis_aries
WBGene00019698	riok-1	77	44.313	ENSPPAG00000016349	RIOK1	99	41.640	Pan_paniscus
WBGene00019698	riok-1	77	50.694	ENSPPRG00000001932	RIOK1	78	47.903	Panthera_pardus
WBGene00019698	riok-1	77	50.694	ENSPTIG00000018545	RIOK1	78	47.903	Panthera_tigris_altaica
WBGene00019698	riok-1	77	49.524	ENSPTRG00000017700	RIOK1	78	47.577	Pan_troglodytes
WBGene00019698	riok-1	77	50.000	ENSPANG00000016522	RIOK1	78	48.337	Papio_anubis
WBGene00019698	riok-1	85	47.085	ENSPKIG00000006442	riok1	79	47.085	Paramormyrops_kingsleyae
WBGene00019698	riok-1	85	47.752	ENSPSIG00000006488	RIOK1	81	47.234	Pelodiscus_sinensis
WBGene00019698	riok-1	64	53.293	ENSPMGG00000017807	riok1	82	55.903	Periophthalmus_magnuspinnatus
WBGene00019698	riok-1	85	46.809	ENSPEMG00000017844	Riok1	79	47.461	Peromyscus_maniculatus_bairdii
WBGene00019698	riok-1	51	62.692	ENSPMAG00000006351	riok1	79	53.030	Petromyzon_marinus
WBGene00019698	riok-1	64	53.009	ENSPCIG00000012653	RIOK1	62	53.009	Phascolarctos_cinereus
WBGene00019698	riok-1	77	49.261	ENSPREG00000009237	riok1	75	49.754	Poecilia_reticulata
WBGene00019698	riok-1	77	49.762	ENSPPYG00000016207	RIOK1	78	47.577	Pongo_abelii
WBGene00019698	riok-1	77	45.433	ENSPCAG00000007892	RIOK1	74	44.794	Procavia_capensis
WBGene00019698	riok-1	77	50.000	ENSPVAG00000014091	RIOK1	78	48.018	Pteropus_vampyrus
WBGene00019698	riok-1	59	43.168	ENSPNYG00000004465	riok1	96	44.304	Pundamilia_nyererei
WBGene00019698	riok-1	86	45.851	ENSPNAG00000015435	riok1	85	46.281	Pygocentrus_nattereri
WBGene00019698	riok-1	85	46.421	ENSRNOG00000014049	Riok1	95	46.018	Rattus_norvegicus
WBGene00019698	riok-1	77	50.000	ENSRBIG00000036685	RIOK1	78	48.337	Rhinopithecus_bieti
WBGene00019698	riok-1	77	50.000	ENSRROG00000036611	RIOK1	78	48.337	Rhinopithecus_roxellana
WBGene00019698	riok-1	77	49.302	ENSSBOG00000012588	RIOK1	78	47.357	Saimiri_boliviensis_boliviensis
WBGene00019698	riok-1	64	52.841	ENSSHAG00000003091	RIOK1	68	53.125	Sarcophilus_harrisii
WBGene00019698	riok-1	85	48.115	ENSSFOG00015001035	riok1	87	45.194	Scleropages_formosus
WBGene00019698	riok-1	59	43.218	ENSSDUG00000007291	riok1	96	43.831	Seriola_dumerili
WBGene00019698	riok-1	77	50.488	ENSSLDG00000017657	riok1	73	51.095	Seriola_lalandi_dorsalis
WBGene00019698	riok-1	76	48.718	ENSSPUG00000007624	RIOK1	71	48.579	Sphenodon_punctatus
WBGene00019698	riok-1	85	47.778	ENSSPAG00000022710	riok1	88	45.833	Stegastes_partitus
WBGene00019698	riok-1	85	46.681	ENSSSCG00000001024	RIOK1	82	46.855	Sus_scrofa
WBGene00019698	riok-1	77	51.345	ENSTGUG00000002331	RIOK1	78	48.009	Taeniopygia_guttata
WBGene00019698	riok-1	52	41.577	ENSTRUG00000001575	-	95	41.007	Takifugu_rubripes
WBGene00019698	riok-1	67	46.218	ENSTRUG00000002854	riok1	83	46.218	Takifugu_rubripes
WBGene00019698	riok-1	86	46.018	ENSTNIG00000003078	riok1	80	47.033	Tetraodon_nigroviridis
WBGene00019698	riok-1	85	46.288	ENSTBEG00000016730	RIOK1	78	46.889	Tupaia_belangeri
WBGene00019698	riok-1	67	53.352	ENSTTRG00000017335	RIOK1	73	53.352	Tursiops_truncatus
WBGene00019698	riok-1	60	56.289	ENSUAMG00000003721	RIOK1	63	52.514	Ursus_americanus
WBGene00019698	riok-1	77	50.962	ENSUMAG00000018461	RIOK1	78	47.903	Ursus_maritimus
WBGene00019698	riok-1	85	47.505	ENSVVUG00000005018	RIOK1	81	46.855	Vulpes_vulpes
WBGene00019698	riok-1	78	52.427	ENSXETG00000020436	riok1	73	52.427	Xenopus_tropicalis
WBGene00019698	riok-1	50	63.386	ENSXCOG00000000245	riok1	90	49.512	Xiphophorus_couchianus
WBGene00019698	riok-1	57	56.954	ENSXMAG00000014572	riok1	64	53.433	Xiphophorus_maculatus