EuRBPDB

Description

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00020146 (Gene tree)
Gene ID: -
Gene Symbol: got-1.2
Alias: -
Full Name: Probable aspartate aminotransferase%2C cytoplasmic
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1791
Position: chrX: 16791347-16793137
Accession: Q22067
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T01C8.5.1	-	1401	NM_078308	T01C8.5.1	408 (aa)	NP_510709	Q22067
T01C8.5.2	-	1419	NM_078308	T01C8.5.2	408 (aa)	NP_510709	Q22067

Gene Model

Click here to download WBGene00020146's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00020146's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00020146	got-1.2	98	59.601	FBgn0001124	Got1	96	59.601	Drosophila_melanogaster
WBGene00020146	got-1.2	98	41.791	FBgn0001125	Got2	94	41.791	Drosophila_melanogaster
WBGene00020146	got-1.2	99	53.790	ENSG00000120053	GOT1	99	53.790	Homo_sapiens
WBGene00020146	got-1.2	97	43.577	ENSG00000125166	GOT2	93	43.284	Homo_sapiens
WBGene00020146	got-1.2	97	43.829	ENSMUSG00000031672	Got2	93	43.532	Mus_musculus
WBGene00020146	got-1.2	98	47.304	YLR027C	AAT2	97	47.304	Saccharomyces_cerevisiae