EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00020263 (Gene tree)
Gene ID: -
Gene Symbol: let-355
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 7118 bases
Position: chrI:5472321-5479438
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T05E8	DEAD	PF00270.29	8e-07	1	1
T05E8	HA2	PF04408.23	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T05E8.3	-	2887	NM_059203	T05E8.3	856 (aa)	NP_491604	O01598

Gene Model

Click here to download WBGene00020263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00020263's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00020263	let-355	77	37.647	WBGene00022056	ddx-35	86	37.647
WBGene00020263	let-355	73	33.076	WBGene00021365	smgl-2	55	33.076
WBGene00020263	let-355	81	34.507	WBGene00003389	mog-1	58	34.507
WBGene00020263	let-355	78	36.686	WBGene00003392	mog-4	62	36.686
WBGene00020263	let-355	80	37.791	WBGene00003393	mog-5	51	38.485
WBGene00020263	let-355	80	36.131	WBGene00018967	ddx-15	92	35.989
WBGene00020263	let-355	77	40.161	WBGene00015525	rha-2	58	39.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00020263	let-355	77	38.218	ENSG00000005100	DHX33	88	38.218	Homo_sapiens
WBGene00020263	let-355	77	39.939	ENSAPOG00000010132	dhx33	91	39.939	Acanthochromis_polyacanthus
WBGene00020263	let-355	77	37.651	ENSAMEG00000006026	DHX33	92	37.651	Ailuropoda_melanoleuca
WBGene00020263	let-355	77	39.605	ENSACIG00000012591	dhx33	91	39.605	Amphilophus_citrinellus
WBGene00020263	let-355	77	39.605	ENSAOCG00000007008	dhx33	91	39.605	Amphiprion_ocellaris
WBGene00020263	let-355	77	37.462	ENSAPEG00000013599	dhx33	91	37.462	Amphiprion_percula
WBGene00020263	let-355	77	39.605	ENSATEG00000005019	dhx33	91	39.605	Anabas_testudineus
WBGene00020263	let-355	75	38.820	ENSAPLG00000015593	DHX33	99	38.820	Anas_platyrhynchos
WBGene00020263	let-355	77	39.790	ENSACAG00000015095	DHX33	92	39.790	Anolis_carolinensis
WBGene00020263	let-355	77	38.218	ENSANAG00000037748	DHX33	92	38.218	Aotus_nancymaae
WBGene00020263	let-355	77	39.909	ENSACLG00000025610	dhx33	91	39.909	Astatotilapia_calliptera
WBGene00020263	let-355	69	53.205	ENSAMXG00000015875	dhx33	78	53.205	Astyanax_mexicanus
WBGene00020263	let-355	78	38.393	ENSBTAG00000032083	DHX33	90	38.393	Bos_taurus
WBGene00020263	let-355	77	38.520	ENSCJAG00000011321	DHX33	88	38.520	Callithrix_jacchus
WBGene00020263	let-355	75	37.963	ENSCAFG00000015535	DHX33	99	37.963	Canis_familiaris
WBGene00020263	let-355	78	37.685	ENSCAFG00020016360	DHX33	94	37.537	Canis_lupus_dingo
WBGene00020263	let-355	78	38.393	ENSCHIG00000014722	DHX33	91	38.393	Capra_hircus
WBGene00020263	let-355	78	38.358	ENSTSYG00000005995	DHX33	89	38.358	Carlito_syrichta
WBGene00020263	let-355	75	37.519	ENSCAPG00000009660	DHX33	96	37.519	Cavia_aperea
WBGene00020263	let-355	78	37.519	ENSCPOG00000003681	DHX33	91	37.369	Cavia_porcellus
WBGene00020263	let-355	77	38.218	ENSCCAG00000027955	DHX33	88	38.218	Cebus_capucinus
WBGene00020263	let-355	77	38.066	ENSCATG00000029157	DHX33	88	38.066	Cercocebus_atys
WBGene00020263	let-355	77	37.462	ENSCLAG00000014171	DHX33	87	37.613	Chinchilla_lanigera
WBGene00020263	let-355	78	35.766	ENSCSAG00000012784	DHX33	83	35.766	Chlorocebus_sabaeus
WBGene00020263	let-355	59	37.917	ENSCHOG00000008707	DHX33	70	37.917	Choloepus_hoffmanni
WBGene00020263	let-355	78	38.336	ENSCPBG00000027741	DHX33	93	38.336	Chrysemys_picta_bellii
WBGene00020263	let-355	77	41.248	ENSCING00000009139	-	97	41.248	Ciona_intestinalis
WBGene00020263	let-355	77	38.066	ENSCANG00000034385	DHX33	92	37.318	Colobus_angolensis_palliatus
WBGene00020263	let-355	80	36.978	ENSCGRG00001023101	Dhx33	94	36.925	Cricetulus_griseus_chok1gshd
WBGene00020263	let-355	74	38.133	ENSCGRG00000010329	Dhx33	99	38.133	Cricetulus_griseus_crigri
WBGene00020263	let-355	77	39.757	ENSCSEG00000011017	dhx33	91	39.757	Cynoglossus_semilaevis
WBGene00020263	let-355	78	38.889	ENSCVAG00000008998	dhx33	92	38.889	Cyprinodon_variegatus
WBGene00020263	let-355	79	37.042	ENSDARG00000051785	dhx33	95	37.042	Danio_rerio
WBGene00020263	let-355	77	37.613	ENSDNOG00000016865	DHX33	82	37.613	Dasypus_novemcinctus
WBGene00020263	let-355	77	37.821	FBgn0032194	CG4901	89	37.821	Drosophila_melanogaster
WBGene00020263	let-355	71	35.222	ENSEBUG00000008342	dhx33	87	35.222	Eptatretus_burgeri
WBGene00020263	let-355	77	37.613	ENSEASG00005015338	DHX33	91	37.613	Equus_asinus_asinus
WBGene00020263	let-355	77	37.613	ENSECAG00000010272	DHX33	88	37.613	Equus_caballus
WBGene00020263	let-355	78	39.318	ENSELUG00000020257	dhx33	93	39.318	Esox_lucius
WBGene00020263	let-355	78	38.336	ENSFCAG00000014755	DHX33	91	38.336	Felis_catus
WBGene00020263	let-355	75	38.176	ENSFALG00000009785	DHX33	90	38.176	Ficedula_albicollis
WBGene00020263	let-355	78	38.209	ENSFDAG00000003334	DHX33	90	38.218	Fukomys_damarensis
WBGene00020263	let-355	67	39.116	ENSFHEG00000014253	dhx33	88	39.116	Fundulus_heteroclitus
WBGene00020263	let-355	77	39.150	ENSGMOG00000012350	dhx33	91	39.150	Gadus_morhua
WBGene00020263	let-355	77	39.757	ENSGAFG00000014811	dhx33	93	39.652	Gambusia_affinis
WBGene00020263	let-355	77	39.454	ENSGACG00000020229	dhx33	91	39.454	Gasterosteus_aculeatus
WBGene00020263	let-355	80	37.681	ENSGAGG00000013448	DHX33	99	37.681	Gopherus_agassizii
WBGene00020263	let-355	79	37.926	ENSGGOG00000002748	DHX33	90	37.926	Gorilla_gorilla
WBGene00020263	let-355	77	39.757	ENSHBUG00000017415	dhx33	91	39.757	Haplochromis_burtoni
WBGene00020263	let-355	77	37.462	ENSHGLG00000014753	DHX33	91	37.462	Heterocephalus_glaber_female
WBGene00020263	let-355	78	37.463	ENSHGLG00100012963	DHX33	95	37.463	Heterocephalus_glaber_male
WBGene00020263	let-355	77	39.909	ENSHCOG00000011161	dhx33	91	39.909	Hippocampus_comes
WBGene00020263	let-355	77	38.636	ENSIPUG00000011594	dhx33	91	38.636	Ictalurus_punctatus
WBGene00020263	let-355	77	37.915	ENSSTOG00000003298	DHX33	89	37.915	Ictidomys_tridecemlineatus
WBGene00020263	let-355	77	38.392	ENSJJAG00000016626	Dhx33	89	38.392	Jaculus_jaculus
WBGene00020263	let-355	79	39.734	ENSKMAG00000013595	dhx33	93	39.734	Kryptolebias_marmoratus
WBGene00020263	let-355	77	39.302	ENSLBEG00000005703	dhx33	91	39.302	Labrus_bergylta
WBGene00020263	let-355	77	39.367	ENSLACG00000018174	DHX33	92	39.367	Latimeria_chalumnae
WBGene00020263	let-355	79	37.206	ENSLAFG00000007136	DHX33	92	37.206	Loxodonta_africana
WBGene00020263	let-355	77	38.218	ENSMFAG00000042578	DHX33	88	38.218	Macaca_fascicularis
WBGene00020263	let-355	77	38.218	ENSMMUG00000006594	DHX33	88	38.218	Macaca_mulatta
WBGene00020263	let-355	77	35.241	ENSMNEG00000034809	DHX33	88	35.241	Macaca_nemestrina
WBGene00020263	let-355	77	38.218	ENSMLEG00000034236	DHX33	88	38.218	Mandrillus_leucophaeus
WBGene00020263	let-355	77	39.757	ENSMAMG00000005936	dhx33	91	39.757	Mastacembelus_armatus
WBGene00020263	let-355	77	39.909	ENSMZEG00005023292	dhx33	91	39.909	Maylandia_zebra
WBGene00020263	let-355	75	38.000	ENSMGAG00000003125	DHX33	99	38.000	Meleagris_gallopavo
WBGene00020263	let-355	80	37.010	ENSMAUG00000011100	Dhx33	93	36.957	Mesocricetus_auratus
WBGene00020263	let-355	78	38.358	ENSMICG00000012715	DHX33	89	38.358	Microcebus_murinus
WBGene00020263	let-355	81	36.700	ENSMOCG00000016069	Dhx33	94	37.085	Microtus_ochrogaster
WBGene00020263	let-355	82	37.199	ENSMMOG00000005732	dhx33	95	37.199	Mola_mola
WBGene00020263	let-355	80	37.573	ENSMODG00000016649	DHX33	95	37.573	Monodelphis_domestica
WBGene00020263	let-355	77	39.909	ENSMALG00000000923	dhx33	91	39.909	Monopterus_albus
WBGene00020263	let-355	80	37.085	MGP_CAROLIEiJ_G0016657	Dhx33	94	37.085	Mus_caroli
WBGene00020263	let-355	80	36.941	ENSMUSG00000040620	Dhx33	94	36.941	Mus_musculus
WBGene00020263	let-355	80	36.941	MGP_PahariEiJ_G0017788	Dhx33	93	36.941	Mus_pahari
WBGene00020263	let-355	80	37.085	MGP_SPRETEiJ_G0017493	Dhx33	94	37.085	Mus_spretus
WBGene00020263	let-355	66	34.912	ENSMPUG00000011250	DHX33	99	34.912	Mustela_putorius_furo
WBGene00020263	let-355	78	37.685	ENSMLUG00000014439	DHX33	83	37.685	Myotis_lucifugus
WBGene00020263	let-355	78	37.910	ENSNGAG00000017139	Dhx33	89	37.915	Nannospalax_galili
WBGene00020263	let-355	77	39.909	ENSNBRG00000017674	dhx33	91	39.909	Neolamprologus_brichardi
WBGene00020263	let-355	63	42.301	ENSMEUG00000009202	DHX33	94	42.301	Notamacropus_eugenii
WBGene00020263	let-355	78	38.897	ENSOPRG00000013163	DHX33	90	38.897	Ochotona_princeps
WBGene00020263	let-355	82	36.338	ENSODEG00000017026	DHX33	92	36.338	Octodon_degus
WBGene00020263	let-355	77	40.212	ENSONIG00000017480	dhx33	87	40.212	Oreochromis_niloticus
WBGene00020263	let-355	80	37.172	ENSOCUG00000004805	DHX33	90	37.139	Oryctolagus_cuniculus
WBGene00020263	let-355	77	39.757	ENSORLG00000011817	dhx33	91	39.757	Oryzias_latipes
WBGene00020263	let-355	77	39.909	ENSORLG00020016766	dhx33	91	39.909	Oryzias_latipes_hni
WBGene00020263	let-355	77	40.061	ENSORLG00015022753	dhx33	95	40.061	Oryzias_latipes_hsok
WBGene00020263	let-355	77	39.757	ENSOMEG00000010438	dhx33	91	39.757	Oryzias_melastigma
WBGene00020263	let-355	79	37.537	ENSOGAG00000001611	DHX33	86	37.464	Otolemur_garnettii
WBGene00020263	let-355	78	38.279	ENSOARG00000003235	DHX33	92	38.279	Ovis_aries
WBGene00020263	let-355	79	37.926	ENSPPAG00000038926	DHX33	90	37.926	Pan_paniscus
WBGene00020263	let-355	78	38.187	ENSPPRG00000009202	DHX33	91	38.187	Panthera_pardus
WBGene00020263	let-355	56	38.254	ENSPTIG00000018141	DHX33	83	38.254	Panthera_tigris_altaica
WBGene00020263	let-355	79	37.926	ENSPTRG00000008632	DHX33	90	37.926	Pan_troglodytes
WBGene00020263	let-355	77	38.369	ENSPANG00000024297	DHX33	88	38.369	Papio_anubis
WBGene00020263	let-355	78	38.336	ENSPKIG00000017401	dhx33	93	38.336	Paramormyrops_kingsleyae
WBGene00020263	let-355	75	38.331	ENSPSIG00000006293	DHX33	93	38.331	Pelodiscus_sinensis
WBGene00020263	let-355	77	39.605	ENSPMGG00000013896	dhx33	91	39.605	Periophthalmus_magnuspinnatus
WBGene00020263	let-355	79	38.067	ENSPEMG00000016472	Dhx33	94	37.358	Peromyscus_maniculatus_bairdii
WBGene00020263	let-355	80	39.181	ENSPCIG00000020074	DHX33	95	39.181	Phascolarctos_cinereus
WBGene00020263	let-355	77	40.152	ENSPFOG00000009426	dhx33	91	40.152	Poecilia_formosa
WBGene00020263	let-355	77	40.152	ENSPLAG00000017730	dhx33	91	40.152	Poecilia_latipinna
WBGene00020263	let-355	77	40.303	ENSPMEG00000012075	dhx33	96	40.345	Poecilia_mexicana
WBGene00020263	let-355	77	39.545	ENSPREG00000008239	dhx33	91	39.545	Poecilia_reticulata
WBGene00020263	let-355	77	38.066	ENSPPYG00000007871	DHX33	81	38.066	Pongo_abelii
WBGene00020263	let-355	55	47.449	ENSPCAG00000006190	DHX33	84	39.655	Procavia_capensis
WBGene00020263	let-355	78	38.657	ENSPCOG00000007524	DHX33	89	38.657	Propithecus_coquereli
WBGene00020263	let-355	78	37.761	ENSPVAG00000002467	DHX33	89	37.761	Pteropus_vampyrus
WBGene00020263	let-355	77	39.909	ENSPNYG00000021648	dhx33	91	39.909	Pundamilia_nyererei
WBGene00020263	let-355	77	38.847	ENSPNAG00000020048	dhx33	91	38.847	Pygocentrus_nattereri
WBGene00020263	let-355	80	37.085	ENSRNOG00000007054	Dhx33	94	37.085	Rattus_norvegicus
WBGene00020263	let-355	77	37.915	ENSRBIG00000040087	DHX33	93	38.389	Rhinopithecus_bieti
WBGene00020263	let-355	77	37.915	ENSRROG00000038052	DHX33	88	37.915	Rhinopithecus_roxellana
WBGene00020263	let-355	78	33.778	YKL078W	-	88	33.383	Saccharomyces_cerevisiae
WBGene00020263	let-355	77	38.369	ENSSBOG00000020529	DHX33	90	38.369	Saimiri_boliviensis_boliviensis
WBGene00020263	let-355	75	39.567	ENSSHAG00000002762	DHX33	99	39.506	Sarcophilus_harrisii
WBGene00020263	let-355	77	39.454	ENSSFOG00015001783	dhx33	91	39.454	Scleropages_formosus
WBGene00020263	let-355	77	39.757	ENSSMAG00000000497	dhx33	91	39.757	Scophthalmus_maximus
WBGene00020263	let-355	77	39.454	ENSSDUG00000017798	dhx33	91	39.454	Seriola_dumerili
WBGene00020263	let-355	77	39.454	ENSSLDG00000020132	dhx33	91	39.454	Seriola_lalandi_dorsalis
WBGene00020263	let-355	79	38.348	ENSSARG00000009813	DHX33	92	38.348	Sorex_araneus
WBGene00020263	let-355	77	39.757	ENSSPAG00000012860	dhx33	91	39.757	Stegastes_partitus
WBGene00020263	let-355	50	35.431	ENSSPAG00000003711	-	96	35.431	Stegastes_partitus
WBGene00020263	let-355	80	36.272	ENSSSCG00000039064	DHX33	93	36.272	Sus_scrofa
WBGene00020263	let-355	77	38.695	ENSTGUG00000004226	DHX33	97	38.695	Taeniopygia_guttata
WBGene00020263	let-355	77	39.302	ENSTRUG00000003395	dhx33	91	39.302	Takifugu_rubripes
WBGene00020263	let-355	77	37.406	ENSTNIG00000008546	dhx33	92	37.406	Tetraodon_nigroviridis
WBGene00020263	let-355	78	38.187	ENSUAMG00000012182	DHX33	94	37.877	Ursus_americanus
WBGene00020263	let-355	78	37.630	ENSVVUG00000027336	DHX33	95	37.537	Vulpes_vulpes
WBGene00020263	let-355	79	39.201	ENSXETG00000009173	dhx33	91	39.318	Xenopus_tropicalis
WBGene00020263	let-355	77	39.757	ENSXCOG00000004969	dhx33	91	39.757	Xiphophorus_couchianus
WBGene00020263	let-355	77	40.061	ENSXMAG00000005679	dhx33	91	40.061	Xiphophorus_maculatus