EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00020423 (Gene tree)
Gene ID: -
Gene Symbol: prp-19
Alias: -
Full Name: Pre-mRNA-processing factor 19
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 2113 bases
Position: chrIII:5169933-5172045
Accession: Q10051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
T10F2	Prp19	PF08606.11	1.4e-30	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
T10F2.4	-	1905	NM_001306714	T10F2.4	492 (aa)	NP_001293643	Q10051

Gene Model

Click here to download WBGene00020423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00020423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00020423	prp-19	100	51.581	ENSG00000110107	PRPF19	100	51.923	Homo_sapiens
WBGene00020423	prp-19	100	53.057	ENSAPOG00000017823	prpf19	100	53.057	Acanthochromis_polyacanthus
WBGene00020423	prp-19	99	51.703	ENSAMEG00000007375	PRPF19	99	51.703	Ailuropoda_melanoleuca
WBGene00020423	prp-19	99	52.906	ENSACIG00000015876	prpf19	98	52.906	Amphilophus_citrinellus
WBGene00020423	prp-19	100	53.254	ENSAOCG00000020444	prpf19	100	53.254	Amphiprion_ocellaris
WBGene00020423	prp-19	100	53.254	ENSAPEG00000016076	prpf19	100	53.254	Amphiprion_percula
WBGene00020423	prp-19	100	53.057	ENSATEG00000008840	prpf19	100	53.057	Anabas_testudineus
WBGene00020423	prp-19	56	30.081	ENSACAG00000007141	WDR36	54	30.081	Anolis_carolinensis
WBGene00020423	prp-19	100	52.174	ENSACAG00000017797	PRPF19	100	52.174	Anolis_carolinensis
WBGene00020423	prp-19	100	51.581	ENSANAG00000021762	PRPF19	100	51.581	Aotus_nancymaae
WBGene00020423	prp-19	100	52.465	ENSACLG00000009416	prpf19	100	52.465	Astatotilapia_calliptera
WBGene00020423	prp-19	100	52.071	ENSAMXG00000011547	prpf19	100	51.874	Astyanax_mexicanus
WBGene00020423	prp-19	100	51.581	ENSBTAG00000014366	PRPF19	100	51.581	Bos_taurus
WBGene00020423	prp-19	100	51.581	ENSCJAG00000016509	PRPF19	100	51.581	Callithrix_jacchus
WBGene00020423	prp-19	100	51.581	ENSCAFG00000016438	PRPF19	98	51.581	Canis_familiaris
WBGene00020423	prp-19	100	51.581	ENSCAFG00020012565	PRPF19	100	51.581	Canis_lupus_dingo
WBGene00020423	prp-19	100	51.581	ENSCHIG00000018281	PRPF19	100	51.581	Capra_hircus
WBGene00020423	prp-19	99	51.400	ENSTSYG00000006860	PRPF19	99	51.400	Carlito_syrichta
WBGene00020423	prp-19	99	51.497	ENSCAPG00000016225	PRPF19	100	51.497	Cavia_aperea
WBGene00020423	prp-19	100	51.779	ENSCPOG00000020688	PRPF19	100	51.779	Cavia_porcellus
WBGene00020423	prp-19	100	51.581	ENSCCAG00000025839	PRPF19	100	51.581	Cebus_capucinus
WBGene00020423	prp-19	100	51.581	ENSCATG00000041921	PRPF19	100	51.581	Cercocebus_atys
WBGene00020423	prp-19	99	51.786	ENSCLAG00000003338	PRPF19	100	51.703	Chinchilla_lanigera
WBGene00020423	prp-19	100	51.581	ENSCSAG00000006254	PRPF19	100	51.581	Chlorocebus_sabaeus
WBGene00020423	prp-19	60	45.016	ENSCHOG00000005840	PRPF19	99	45.016	Choloepus_hoffmanni
WBGene00020423	prp-19	100	51.186	ENSCPBG00000027061	PRPF19	100	51.186	Chrysemys_picta_bellii
WBGene00020423	prp-19	99	51.981	ENSCING00000016625	-	97	51.981	Ciona_intestinalis
WBGene00020423	prp-19	100	50.797	ENSCSAVG00000002027	-	100	50.797	Ciona_savignyi
WBGene00020423	prp-19	77	55.102	ENSCANG00000027155	PRPF19	68	55.102	Colobus_angolensis_palliatus
WBGene00020423	prp-19	100	51.581	ENSCGRG00001002699	Prpf19	100	51.581	Cricetulus_griseus_chok1gshd
WBGene00020423	prp-19	99	51.400	ENSCGRG00000008964	Prpf19	99	51.400	Cricetulus_griseus_crigri
WBGene00020423	prp-19	100	52.372	ENSCSEG00000010411	prpf19	100	52.372	Cynoglossus_semilaevis
WBGene00020423	prp-19	100	52.663	ENSCVAG00000012011	prpf19	100	52.663	Cyprinodon_variegatus
WBGene00020423	prp-19	100	52.268	ENSDARG00000015239	prpf19	100	52.268	Danio_rerio
WBGene00020423	prp-19	100	51.581	ENSDNOG00000005797	PRPF19	100	51.581	Dasypus_novemcinctus
WBGene00020423	prp-19	100	51.581	ENSDORG00000006906	Prpf19	100	51.581	Dipodomys_ordii
WBGene00020423	prp-19	100	46.260	FBgn0261119	Prp19	99	46.260	Drosophila_melanogaster
WBGene00020423	prp-19	99	54.206	ENSETEG00000012295	PRPF19	87	54.206	Echinops_telfairi
WBGene00020423	prp-19	83	50.952	ENSEBUG00000013075	prpf19	100	50.952	Eptatretus_burgeri
WBGene00020423	prp-19	95	52.401	ENSEASG00005008056	PRPF19	98	52.401	Equus_asinus_asinus
WBGene00020423	prp-19	100	51.581	ENSECAG00000007322	PRPF19	100	51.581	Equus_caballus
WBGene00020423	prp-19	100	52.569	ENSELUG00000020276	-	100	52.569	Esox_lucius
WBGene00020423	prp-19	100	49.901	ENSELUG00000004578	prpf19	100	49.901	Esox_lucius
WBGene00020423	prp-19	100	51.581	ENSFCAG00000013668	PRPF19	100	51.581	Felis_catus
WBGene00020423	prp-19	100	51.186	ENSFALG00000012084	PRPF19	100	51.186	Ficedula_albicollis
WBGene00020423	prp-19	83	51.064	ENSFDAG00000009420	PRPF19	96	51.064	Fukomys_damarensis
WBGene00020423	prp-19	100	52.663	ENSFHEG00000022135	prpf19	100	52.663	Fundulus_heteroclitus
WBGene00020423	prp-19	100	53.452	ENSGMOG00000014756	prpf19	100	53.452	Gadus_morhua
WBGene00020423	prp-19	100	51.677	ENSGALG00000036530	PRPF19	100	51.677	Gallus_gallus
WBGene00020423	prp-19	100	52.860	ENSGAFG00000008931	prpf19	100	52.860	Gambusia_affinis
WBGene00020423	prp-19	100	52.268	ENSGACG00000017976	prpf19	100	52.268	Gasterosteus_aculeatus
WBGene00020423	prp-19	100	51.186	ENSGAGG00000013328	PRPF19	100	51.186	Gopherus_agassizii
WBGene00020423	prp-19	100	51.581	ENSGGOG00000008648	PRPF19	100	51.581	Gorilla_gorilla
WBGene00020423	prp-19	100	52.465	ENSHBUG00000008394	prpf19	100	52.465	Haplochromis_burtoni
WBGene00020423	prp-19	100	51.779	ENSHGLG00000003934	PRPF19	100	51.779	Heterocephalus_glaber_female
WBGene00020423	prp-19	82	44.498	ENSHGLG00100010649	PRPF19	100	39.600	Heterocephalus_glaber_male
WBGene00020423	prp-19	100	52.148	ENSHCOG00000016720	prpf19	100	52.465	Hippocampus_comes
WBGene00020423	prp-19	100	52.860	ENSIPUG00000013084	prpf19	100	52.860	Ictalurus_punctatus
WBGene00020423	prp-19	100	51.581	ENSSTOG00000001598	PRPF19	100	51.581	Ictidomys_tridecemlineatus
WBGene00020423	prp-19	100	51.581	ENSJJAG00000020609	Prpf19	100	51.581	Jaculus_jaculus
WBGene00020423	prp-19	100	53.057	ENSKMAG00000010257	prpf19	100	53.057	Kryptolebias_marmoratus
WBGene00020423	prp-19	100	52.268	ENSLBEG00000027436	prpf19	100	52.268	Labrus_bergylta
WBGene00020423	prp-19	100	51.670	ENSLACG00000003434	PRPF19	100	51.670	Latimeria_chalumnae
WBGene00020423	prp-19	91	46.055	ENSLOCG00000008123	prpf19	99	46.055	Lepisosteus_oculatus
WBGene00020423	prp-19	100	50.096	ENSLAFG00000002644	PRPF19	100	50.096	Loxodonta_africana
WBGene00020423	prp-19	100	51.581	ENSMFAG00000036743	PRPF19	100	51.581	Macaca_fascicularis
WBGene00020423	prp-19	100	51.581	ENSMMUG00000014530	PRPF19	100	51.779	Macaca_mulatta
WBGene00020423	prp-19	100	51.581	ENSMNEG00000044485	PRPF19	100	51.581	Macaca_nemestrina
WBGene00020423	prp-19	100	51.581	ENSMLEG00000043312	PRPF19	100	51.581	Mandrillus_leucophaeus
WBGene00020423	prp-19	100	52.860	ENSMAMG00000006843	prpf19	100	52.860	Mastacembelus_armatus
WBGene00020423	prp-19	100	52.465	ENSMZEG00005013356	prpf19	100	52.465	Maylandia_zebra
WBGene00020423	prp-19	96	49.899	ENSMGAG00000003180	PRPF19	99	49.899	Meleagris_gallopavo
WBGene00020423	prp-19	99	51.400	ENSMAUG00000012585	Prpf19	99	51.400	Mesocricetus_auratus
WBGene00020423	prp-19	100	51.581	ENSMICG00000011236	PRPF19	100	51.581	Microcebus_murinus
WBGene00020423	prp-19	100	51.581	ENSMOCG00000010383	Prpf19	100	51.581	Microtus_ochrogaster
WBGene00020423	prp-19	100	52.964	ENSMMOG00000003138	prpf19	100	52.964	Mola_mola
WBGene00020423	prp-19	100	51.779	ENSMODG00000020338	PRPF19	100	51.779	Monodelphis_domestica
WBGene00020423	prp-19	99	48.527	ENSMALG00000010981	prpf19	99	48.527	Monopterus_albus
WBGene00020423	prp-19	100	51.581	MGP_CAROLIEiJ_G0022704	Prpf19	100	51.581	Mus_caroli
WBGene00020423	prp-19	100	51.581	ENSMUSG00000024735	Prpf19	100	51.581	Mus_musculus
WBGene00020423	prp-19	100	51.581	MGP_PahariEiJ_G0014198	Prpf19	100	51.581	Mus_pahari
WBGene00020423	prp-19	100	51.581	MGP_SPRETEiJ_G0023618	Prpf19	100	51.581	Mus_spretus
WBGene00020423	prp-19	100	51.581	ENSMPUG00000014432	PRPF19	100	51.581	Mustela_putorius_furo
WBGene00020423	prp-19	100	50.672	ENSMLUG00000017597	PRPF19	100	50.672	Myotis_lucifugus
WBGene00020423	prp-19	100	51.581	ENSNGAG00000012671	Prpf19	100	51.581	Nannospalax_galili
WBGene00020423	prp-19	100	52.663	ENSNBRG00000000055	prpf19	100	52.663	Neolamprologus_brichardi
WBGene00020423	prp-19	100	51.581	ENSNLEG00000013618	PRPF19	100	51.581	Nomascus_leucogenys
WBGene00020423	prp-19	99	49.699	ENSOPRG00000008630	PRPF19	100	49.699	Ochotona_princeps
WBGene00020423	prp-19	100	51.976	ENSODEG00000004043	PRPF19	100	51.976	Octodon_degus
WBGene00020423	prp-19	100	52.663	ENSONIG00000004880	prpf19	100	52.663	Oreochromis_niloticus
WBGene00020423	prp-19	100	49.526	ENSOCUG00000015689	PRPF19	100	49.526	Oryctolagus_cuniculus
WBGene00020423	prp-19	100	52.663	ENSORLG00000004666	prpf19	100	52.663	Oryzias_latipes
WBGene00020423	prp-19	100	52.663	ENSORLG00020013561	prpf19	100	52.663	Oryzias_latipes_hni
WBGene00020423	prp-19	100	52.663	ENSORLG00015022196	prpf19	100	52.663	Oryzias_latipes_hsok
WBGene00020423	prp-19	100	52.465	ENSOMEG00000004424	prpf19	100	52.465	Oryzias_melastigma
WBGene00020423	prp-19	100	51.779	ENSOGAG00000016756	PRPF19	100	51.779	Otolemur_garnettii
WBGene00020423	prp-19	100	51.581	ENSOARG00000015596	PRPF19	100	51.581	Ovis_aries
WBGene00020423	prp-19	99	50.489	ENSPPAG00000030246	PRPF19	100	50.489	Pan_paniscus
WBGene00020423	prp-19	100	51.581	ENSPPRG00000002470	PRPF19	100	51.581	Panthera_pardus
WBGene00020423	prp-19	99	51.503	ENSPTIG00000006541	PRPF19	99	51.503	Panthera_tigris_altaica
WBGene00020423	prp-19	100	51.581	ENSPTRG00000003724	PRPF19	100	51.581	Pan_troglodytes
WBGene00020423	prp-19	100	51.581	ENSPANG00000002762	PRPF19	100	51.581	Papio_anubis
WBGene00020423	prp-19	100	52.465	ENSPKIG00000019715	prpf19	100	52.465	Paramormyrops_kingsleyae
WBGene00020423	prp-19	83	50.238	ENSPSIG00000007497	PRPF19	100	50.238	Pelodiscus_sinensis
WBGene00020423	prp-19	100	52.778	ENSPMGG00000017527	prpf19	100	52.778	Periophthalmus_magnuspinnatus
WBGene00020423	prp-19	99	51.200	ENSPEMG00000019270	Prpf19	99	51.200	Peromyscus_maniculatus_bairdii
WBGene00020423	prp-19	93	52.119	ENSPCIG00000003485	PRPF19	79	52.119	Phascolarctos_cinereus
WBGene00020423	prp-19	100	52.860	ENSPFOG00000002558	prpf19	100	52.860	Poecilia_formosa
WBGene00020423	prp-19	100	52.860	ENSPLAG00000017942	prpf19	100	52.860	Poecilia_latipinna
WBGene00020423	prp-19	100	52.860	ENSPMEG00000008638	prpf19	100	52.860	Poecilia_mexicana
WBGene00020423	prp-19	100	54.147	ENSPREG00000002489	prpf19	94	54.147	Poecilia_reticulata
WBGene00020423	prp-19	95	52.192	ENSPPYG00000003202	PRPF19	91	52.192	Pongo_abelii
WBGene00020423	prp-19	100	51.581	ENSPCAG00000001930	PRPF19	100	51.581	Procavia_capensis
WBGene00020423	prp-19	93	52.321	ENSPCOG00000014017	PRPF19	100	52.321	Propithecus_coquereli
WBGene00020423	prp-19	100	51.581	ENSPVAG00000014669	PRPF19	100	51.581	Pteropus_vampyrus
WBGene00020423	prp-19	100	52.465	ENSPNYG00000000859	prpf19	100	52.465	Pundamilia_nyererei
WBGene00020423	prp-19	100	52.071	ENSPNAG00000019245	prpf19	100	52.071	Pygocentrus_nattereri
WBGene00020423	prp-19	100	51.581	ENSRNOG00000020897	Prpf19	100	51.581	Rattus_norvegicus
WBGene00020423	prp-19	100	51.581	ENSRBIG00000036672	PRPF19	100	51.581	Rhinopithecus_bieti
WBGene00020423	prp-19	100	51.581	ENSRROG00000041572	PRPF19	100	51.581	Rhinopithecus_roxellana
WBGene00020423	prp-19	100	51.581	ENSSBOG00000022840	PRPF19	100	51.581	Saimiri_boliviensis_boliviensis
WBGene00020423	prp-19	100	51.976	ENSSHAG00000009462	PRPF19	100	51.976	Sarcophilus_harrisii
WBGene00020423	prp-19	100	51.581	ENSSFOG00015001236	prpf19	100	51.581	Scleropages_formosus
WBGene00020423	prp-19	100	52.663	ENSSMAG00000002273	prpf19	100	52.663	Scophthalmus_maximus
WBGene00020423	prp-19	100	52.860	ENSSDUG00000003299	prpf19	100	52.860	Seriola_dumerili
WBGene00020423	prp-19	100	52.860	ENSSLDG00000003019	prpf19	100	52.860	Seriola_lalandi_dorsalis
WBGene00020423	prp-19	100	50.988	ENSSPUG00000019328	PRPF19	100	50.988	Sphenodon_punctatus
WBGene00020423	prp-19	100	53.057	ENSSPAG00000008546	prpf19	100	53.057	Stegastes_partitus
WBGene00020423	prp-19	100	51.581	ENSSSCG00000013107	PRPF19	100	51.581	Sus_scrofa
WBGene00020423	prp-19	100	51.186	ENSTGUG00000006319	PRPF19	100	51.186	Taeniopygia_guttata
WBGene00020423	prp-19	100	52.465	ENSTRUG00000008502	prpf19	100	52.465	Takifugu_rubripes
WBGene00020423	prp-19	100	46.869	ENSTNIG00000014219	prpf19	100	46.869	Tetraodon_nigroviridis
WBGene00020423	prp-19	100	51.683	ENSTTRG00000012476	PRPF19	100	51.683	Tursiops_truncatus
WBGene00020423	prp-19	100	51.581	ENSUAMG00000011280	PRPF19	100	51.581	Ursus_americanus
WBGene00020423	prp-19	83	50.591	ENSUMAG00000011609	PRPF19	83	50.591	Ursus_maritimus
WBGene00020423	prp-19	89	52.643	ENSVPAG00000010516	PRPF19	99	52.643	Vicugna_pacos
WBGene00020423	prp-19	100	51.581	ENSVVUG00000005291	PRPF19	100	51.581	Vulpes_vulpes
WBGene00020423	prp-19	53	30.682	ENSVVUG00000012684	WDR36	50	30.682	Vulpes_vulpes
WBGene00020423	prp-19	86	54.817	ENSXETG00000011938	prpf19	99	54.817	Xenopus_tropicalis
WBGene00020423	prp-19	100	52.663	ENSXCOG00000003141	prpf19	100	52.663	Xiphophorus_couchianus
WBGene00020423	prp-19	100	52.860	ENSXMAG00000008485	prpf19	100	52.860	Xiphophorus_maculatus