EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: WBGene00020936 (Gene tree)
Gene ID: -
Gene Symbol: hrpf-1
Alias: -
Full Name: HnRNP F homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3130 bases
Position: chrI:6753219-6756348
Accession: Q9BIB7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
W02D3	RRM_1	PF00076.22	7.7e-23	1	2
W02D3	RRM_1	PF00076.22	7.7e-23	2	2
W02D3	RRM_1	PF00076.22	1.2e-18	1	2
W02D3	RRM_1	PF00076.22	1.2e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
W02D3.11b	-	1567	-	W02D3.11b	362 (aa)	NP_740878	H2KZN0
W02D3.11a	-	1815	NM_170888	W02D3.11a	549 (aa)	NP_740877	Q9BIB7

Gene Model

Click here to download WBGene00020936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00020936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00020936	hrpf-1	55	38.158	WBGene00022253	hrpf-2	56	38.158
WBGene00020936	hrpf-1	58	39.326	WBGene00006367	sym-2	58	39.326