EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00021004 (Gene tree)
Gene ID: -
Gene Symbol: sftb-2
Alias: -
Full Name: Splicing Factor ThreeB (3b) Subunit homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 3518 bases
Position: chrV:128237-131754
Accession: O16997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
W03F9	DUF382	PF04037.13	2.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
W03F9.10	-	2016	NM_070740	W03F9.10	602 (aa)	NP_503141	O16997

Gene Model

Click here to download WBGene00021004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021004's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021004	sftb-2	89	51.825	ENSG00000087365	SF3B2	99	50.000	Homo_sapiens
WBGene00021004	sftb-2	84	50.969	ENSAPOG00000001974	sf3b2	59	50.749	Acanthochromis_polyacanthus
WBGene00021004	sftb-2	89	51.825	ENSAMEG00000017206	SF3B2	59	51.060	Ailuropoda_melanoleuca
WBGene00021004	sftb-2	92	48.940	ENSACIG00000000624	sf3b2	63	48.785	Amphilophus_citrinellus
WBGene00021004	sftb-2	89	49.453	ENSAOCG00000009207	sf3b2	63	49.120	Amphiprion_ocellaris
WBGene00021004	sftb-2	89	49.453	ENSAPEG00000002762	sf3b2	63	48.090	Amphiprion_percula
WBGene00021004	sftb-2	90	43.502	ENSACAG00000008615	SF3B2	60	41.964	Anolis_carolinensis
WBGene00021004	sftb-2	89	51.825	ENSANAG00000029120	SF3B2	60	50.532	Aotus_nancymaae
WBGene00021004	sftb-2	95	47.423	ENSACLG00000014771	sf3b2	65	48.084	Astatotilapia_calliptera
WBGene00021004	sftb-2	88	50.281	ENSAMXG00000007929	sf3b2	77	50.000	Astyanax_mexicanus
WBGene00021004	sftb-2	89	51.825	ENSBTAG00000002778	SF3B2	59	51.060	Bos_taurus
WBGene00021004	sftb-2	89	51.825	ENSCJAG00000001656	SF3B2	60	50.532	Callithrix_jacchus
WBGene00021004	sftb-2	89	51.825	ENSCAFG00000013033	SF3B2	59	51.060	Canis_familiaris
WBGene00021004	sftb-2	89	51.825	ENSCAFG00020015382	SF3B2	59	51.060	Canis_lupus_dingo
WBGene00021004	sftb-2	89	51.825	ENSCHIG00000011211	SF3B2	59	51.060	Capra_hircus
WBGene00021004	sftb-2	89	51.825	ENSTSYG00000000959	SF3B2	60	50.532	Carlito_syrichta
WBGene00021004	sftb-2	56	54.783	ENSCAPG00000006065	SF3B2	67	53.913	Cavia_aperea
WBGene00021004	sftb-2	74	55.778	ENSCPOG00000008294	SF3B2	56	54.292	Cavia_porcellus
WBGene00021004	sftb-2	89	51.825	ENSCCAG00000035256	SF3B2	60	50.532	Cebus_capucinus
WBGene00021004	sftb-2	89	51.825	ENSCATG00000042240	SF3B2	61	50.532	Cercocebus_atys
WBGene00021004	sftb-2	89	51.825	ENSCLAG00000016852	SF3B2	60	50.532	Chinchilla_lanigera
WBGene00021004	sftb-2	89	51.825	ENSCSAG00000008121	SF3B2	59	50.532	Chlorocebus_sabaeus
WBGene00021004	sftb-2	91	51.056	ENSCPBG00000022465	SF3B2	74	52.313	Chrysemys_picta_bellii
WBGene00021004	sftb-2	87	51.509	ENSCING00000005665	-	87	50.177	Ciona_intestinalis
WBGene00021004	sftb-2	89	49.546	ENSCSAVG00000002029	-	84	49.546	Ciona_savignyi
WBGene00021004	sftb-2	89	51.825	ENSCANG00000039680	SF3B2	60	51.060	Colobus_angolensis_palliatus
WBGene00021004	sftb-2	89	51.825	ENSCGRG00001015741	Sf3b2	60	50.532	Cricetulus_griseus_chok1gshd
WBGene00021004	sftb-2	89	51.825	ENSCGRG00000018110	Sf3b2	62	50.532	Cricetulus_griseus_crigri
WBGene00021004	sftb-2	89	50.276	ENSCSEG00000000230	sf3b2	69	50.000	Cynoglossus_semilaevis
WBGene00021004	sftb-2	89	49.541	ENSCVAG00000003357	sf3b2	64	50.179	Cyprinodon_variegatus
WBGene00021004	sftb-2	89	48.201	ENSDARG00000018049	sf3b2	70	46.080	Danio_rerio
WBGene00021004	sftb-2	89	51.642	ENSDNOG00000009484	SF3B2	67	50.883	Dasypus_novemcinctus
WBGene00021004	sftb-2	89	51.825	ENSDORG00000002495	Sf3b2	60	50.532	Dipodomys_ordii
WBGene00021004	sftb-2	89	51.273	ENSEBUG00000013703	sf3b2	60	50.699	Eptatretus_burgeri
WBGene00021004	sftb-2	89	51.825	ENSEASG00005004508	SF3B2	59	51.060	Equus_asinus_asinus
WBGene00021004	sftb-2	89	51.825	ENSECAG00000024461	SF3B2	59	51.060	Equus_caballus
WBGene00021004	sftb-2	89	50.184	ENSELUG00000005586	sf3b2	68	46.794	Esox_lucius
WBGene00021004	sftb-2	89	51.825	ENSFCAG00000013289	SF3B2	60	51.060	Felis_catus
WBGene00021004	sftb-2	79	51.633	ENSFALG00000014653	SF3B2	76	49.729	Ficedula_albicollis
WBGene00021004	sftb-2	89	51.825	ENSFDAG00000019806	SF3B2	60	50.532	Fukomys_damarensis
WBGene00021004	sftb-2	89	49.541	ENSFHEG00000020968	sf3b2	64	49.293	Fundulus_heteroclitus
WBGene00021004	sftb-2	89	49.180	ENSGMOG00000012131	sf3b2	81	49.376	Gadus_morhua
WBGene00021004	sftb-2	89	49.174	ENSGAFG00000001675	sf3b2	63	49.823	Gambusia_affinis
WBGene00021004	sftb-2	89	49.817	ENSGACG00000019012	sf3b2	85	49.308	Gasterosteus_aculeatus
WBGene00021004	sftb-2	91	51.232	ENSGAGG00000023916	SF3B2	63	51.232	Gopherus_agassizii
WBGene00021004	sftb-2	89	51.825	ENSGGOG00000028448	SF3B2	60	50.532	Gorilla_gorilla
WBGene00021004	sftb-2	97	47.716	ENSHBUG00000017349	sf3b2	65	48.084	Haplochromis_burtoni
WBGene00021004	sftb-2	89	51.825	ENSHGLG00000010807	SF3B2	60	51.060	Heterocephalus_glaber_female
WBGene00021004	sftb-2	89	51.825	ENSHGLG00100006361	SF3B2	60	51.060	Heterocephalus_glaber_male
WBGene00021004	sftb-2	92	48.596	ENSHCOG00000016203	sf3b2	65	48.596	Hippocampus_comes
WBGene00021004	sftb-2	89	49.909	ENSIPUG00000009383	sf3b2	67	47.869	Ictalurus_punctatus
WBGene00021004	sftb-2	89	51.825	ENSSTOG00000028892	SF3B2	60	50.532	Ictidomys_tridecemlineatus
WBGene00021004	sftb-2	89	51.825	ENSJJAG00000018193	Sf3b2	60	50.532	Jaculus_jaculus
WBGene00021004	sftb-2	89	50.640	ENSKMAG00000020181	sf3b2	69	47.673	Kryptolebias_marmoratus
WBGene00021004	sftb-2	88	49.538	ENSLBEG00000027739	sf3b2	76	49.550	Labrus_bergylta
WBGene00021004	sftb-2	92	48.947	ENSLACG00000010429	SF3B2	62	48.691	Latimeria_chalumnae
WBGene00021004	sftb-2	89	51.737	ENSLAFG00000002128	SF3B2	60	50.973	Loxodonta_africana
WBGene00021004	sftb-2	89	51.730	ENSMFAG00000003064	SF3B2	61	50.442	Macaca_fascicularis
WBGene00021004	sftb-2	89	49.635	ENSMMUG00000011743	SF3B2	60	47.780	Macaca_mulatta
WBGene00021004	sftb-2	89	51.825	ENSMNEG00000034437	SF3B2	61	50.532	Macaca_nemestrina
WBGene00021004	sftb-2	89	51.825	ENSMLEG00000029373	SF3B2	61	50.532	Mandrillus_leucophaeus
WBGene00021004	sftb-2	91	49.369	ENSMAMG00000014103	sf3b2	63	49.387	Mastacembelus_armatus
WBGene00021004	sftb-2	89	49.265	ENSMZEG00005020789	sf3b2	64	48.084	Maylandia_zebra
WBGene00021004	sftb-2	62	52.368	ENSMAUG00000017040	Sf3b2	65	52.926	Mesocricetus_auratus
WBGene00021004	sftb-2	89	50.364	ENSMICG00000016942	-	63	50.271	Microcebus_murinus
WBGene00021004	sftb-2	89	51.642	ENSMICG00000008565	-	60	50.355	Microcebus_murinus
WBGene00021004	sftb-2	89	51.825	ENSMOCG00000003136	Sf3b2	60	50.532	Microtus_ochrogaster
WBGene00021004	sftb-2	89	49.262	ENSMMOG00000012928	sf3b2	65	48.854	Mola_mola
WBGene00021004	sftb-2	89	50.271	ENSMODG00000025020	-	83	48.825	Monodelphis_domestica
WBGene00021004	sftb-2	91	50.712	ENSMODG00000008490	-	67	50.967	Monodelphis_domestica
WBGene00021004	sftb-2	89	49.084	ENSMALG00000015137	sf3b2	65	47.849	Monopterus_albus
WBGene00021004	sftb-2	89	51.825	MGP_CAROLIEiJ_G0022539	Sf3b2	60	51.060	Mus_caroli
WBGene00021004	sftb-2	89	51.825	ENSMUSG00000024853	Sf3b2	60	50.532	Mus_musculus
WBGene00021004	sftb-2	89	51.825	MGP_PahariEiJ_G0014036	Sf3b2	60	51.060	Mus_pahari
WBGene00021004	sftb-2	89	51.825	MGP_SPRETEiJ_G0023453	Sf3b2	60	50.532	Mus_spretus
WBGene00021004	sftb-2	89	51.825	ENSMPUG00000011349	SF3B2	59	51.060	Mustela_putorius_furo
WBGene00021004	sftb-2	89	51.642	ENSMLUG00000011136	SF3B2	59	50.883	Myotis_lucifugus
WBGene00021004	sftb-2	89	51.825	ENSNGAG00000012103	Sf3b2	61	51.060	Nannospalax_galili
WBGene00021004	sftb-2	95	48.709	ENSNLEG00000006007	SF3B2	60	49.556	Nomascus_leucogenys
WBGene00021004	sftb-2	79	53.799	ENSODEG00000017764	SF3B2	57	52.485	Octodon_degus
WBGene00021004	sftb-2	89	49.273	ENSONIG00000013068	sf3b2	63	49.016	Oreochromis_niloticus
WBGene00021004	sftb-2	76	56.494	ENSOANG00000012482	SF3B2	58	54.762	Ornithorhynchus_anatinus
WBGene00021004	sftb-2	89	51.825	ENSOCUG00000015722	-	62	51.060	Oryctolagus_cuniculus
WBGene00021004	sftb-2	92	48.854	ENSORLG00000008235	sf3b2	63	49.209	Oryzias_latipes
WBGene00021004	sftb-2	92	48.854	ENSORLG00020005357	sf3b2	65	49.209	Oryzias_latipes_hni
WBGene00021004	sftb-2	97	47.492	ENSORLG00015022454	sf3b2	77	49.209	Oryzias_latipes_hsok
WBGene00021004	sftb-2	92	48.677	ENSOMEG00000017480	sf3b2	66	49.033	Oryzias_melastigma
WBGene00021004	sftb-2	89	51.825	ENSOGAG00000005799	SF3B2	59	50.532	Otolemur_garnettii
WBGene00021004	sftb-2	89	51.825	ENSOARG00000002125	SF3B2	72	51.060	Ovis_aries
WBGene00021004	sftb-2	89	51.825	ENSPPAG00000007359	SF3B2	60	50.532	Pan_paniscus
WBGene00021004	sftb-2	89	51.825	ENSPPRG00000013334	SF3B2	60	51.060	Panthera_pardus
WBGene00021004	sftb-2	89	51.825	ENSPTIG00000015022	SF3B2	60	51.060	Panthera_tigris_altaica
WBGene00021004	sftb-2	89	51.825	ENSPTRG00000003912	SF3B2	60	50.532	Pan_troglodytes
WBGene00021004	sftb-2	89	51.825	ENSPANG00000008593	SF3B2	61	50.532	Papio_anubis
WBGene00021004	sftb-2	89	50.000	ENSPKIG00000016576	sf3b2	74	49.909	Paramormyrops_kingsleyae
WBGene00021004	sftb-2	91	50.704	ENSPSIG00000003158	SF3B2	73	50.704	Pelodiscus_sinensis
WBGene00021004	sftb-2	92	47.703	ENSPMGG00000000819	sf3b2	65	47.803	Periophthalmus_magnuspinnatus
WBGene00021004	sftb-2	89	51.825	ENSPEMG00000015437	Sf3b2	60	51.060	Peromyscus_maniculatus_bairdii
WBGene00021004	sftb-2	89	48.263	ENSPEMG00000015451	-	68	47.826	Peromyscus_maniculatus_bairdii
WBGene00021004	sftb-2	89	51.737	ENSPCIG00000008381	SF3B2	62	51.986	Phascolarctos_cinereus
WBGene00021004	sftb-2	89	49.097	ENSPFOG00000002552	sf3b2	63	50.269	Poecilia_formosa
WBGene00021004	sftb-2	89	49.541	ENSPLAG00000001471	sf3b2	63	50.449	Poecilia_latipinna
WBGene00021004	sftb-2	89	49.097	ENSPMEG00000013180	sf3b2	63	50.269	Poecilia_mexicana
WBGene00021004	sftb-2	89	49.541	ENSPREG00000002665	sf3b2	64	49.912	Poecilia_reticulata
WBGene00021004	sftb-2	89	51.825	ENSPCAG00000005129	SF3B2	59	51.060	Procavia_capensis
WBGene00021004	sftb-2	89	51.642	ENSPCOG00000025375	SF3B2	60	50.355	Propithecus_coquereli
WBGene00021004	sftb-2	89	48.624	ENSPNYG00000023594	sf3b2	74	47.387	Pundamilia_nyererei
WBGene00021004	sftb-2	89	49.453	ENSPNAG00000001891	sf3b2	62	49.645	Pygocentrus_nattereri
WBGene00021004	sftb-2	89	51.642	ENSRNOG00000020412	Sf3b2	60	50.883	Rattus_norvegicus
WBGene00021004	sftb-2	89	51.825	ENSRBIG00000034065	SF3B2	60	51.060	Rhinopithecus_bieti
WBGene00021004	sftb-2	89	51.825	ENSRROG00000034496	SF3B2	60	51.060	Rhinopithecus_roxellana
WBGene00021004	sftb-2	55	34.111	YMR240C	-	67	34.194	Saccharomyces_cerevisiae
WBGene00021004	sftb-2	89	51.825	ENSSBOG00000026337	SF3B2	60	50.532	Saimiri_boliviensis_boliviensis
WBGene00021004	sftb-2	89	47.662	ENSSHAG00000018043	-	64	47.943	Sarcophilus_harrisii
WBGene00021004	sftb-2	89	50.738	ENSSHAG00000010933	-	58	50.738	Sarcophilus_harrisii
WBGene00021004	sftb-2	89	50.826	ENSSFOG00015021125	sf3b2	61	50.899	Scleropages_formosus
WBGene00021004	sftb-2	88	49.259	ENSSMAG00000004079	sf3b2	66	48.041	Scophthalmus_maximus
WBGene00021004	sftb-2	88	49.723	ENSSDUG00000008499	sf3b2	65	50.178	Seriola_dumerili
WBGene00021004	sftb-2	88	49.723	ENSSLDG00000006838	sf3b2	62	50.177	Seriola_lalandi_dorsalis
WBGene00021004	sftb-2	90	51.163	ENSSPUG00000009198	SF3B2	62	51.521	Sphenodon_punctatus
WBGene00021004	sftb-2	89	49.817	ENSSPAG00000004406	sf3b2	60	49.735	Stegastes_partitus
WBGene00021004	sftb-2	89	51.825	ENSSSCG00000012957	SF3B2	59	51.060	Sus_scrofa
WBGene00021004	sftb-2	92	42.059	ENSTRUG00000007611	sf3b2	79	42.361	Takifugu_rubripes
WBGene00021004	sftb-2	94	46.957	ENSTNIG00000007441	sf3b2	65	47.568	Tetraodon_nigroviridis
WBGene00021004	sftb-2	85	56.720	ENSTBEG00000004258	SF3B2	53	58.333	Tupaia_belangeri
WBGene00021004	sftb-2	89	51.825	ENSTTRG00000014339	SF3B2	59	51.060	Tursiops_truncatus
WBGene00021004	sftb-2	84	53.488	ENSUAMG00000020754	SF3B2	54	54.506	Ursus_americanus
WBGene00021004	sftb-2	89	51.825	ENSUMAG00000010994	SF3B2	59	51.060	Ursus_maritimus
WBGene00021004	sftb-2	89	51.825	ENSVVUG00000027029	SF3B2	59	51.060	Vulpes_vulpes
WBGene00021004	sftb-2	89	50.909	ENSXETG00000008422	sf3b2	67	50.727	Xenopus_tropicalis
WBGene00021004	sftb-2	89	49.174	ENSXCOG00000008943	sf3b2	78	49.120	Xiphophorus_couchianus
WBGene00021004	sftb-2	89	49.174	ENSXMAG00000008467	sf3b2	63	49.823	Xiphophorus_maculatus