EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00021063 (Gene tree)
Gene ID: -
Gene Symbol: sbds-1
Alias: -
Full Name: Ribosome maturation protein SBDS
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1941 bases
Position: chrIII:636479-638419
Accession: Q23202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
W06E11	SBDS	PF01172.18	4.3e-30	1	1
W06E11	SBDS_C	PF09377.10	5.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
W06E11.4	-	1006	NM_064825	W06E11.4	253 (aa)	NP_497226	Q23202

Gene Model

Click here to download WBGene00021063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021063's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021063	sbds-1	97	56.911	ENSG00000126524	SBDS	95	75.610	Homo_sapiens
WBGene00021063	sbds-1	97	57.317	ENSAPOG00000014285	sbds	98	57.317	Acanthochromis_polyacanthus
WBGene00021063	sbds-1	97	56.504	ENSAMEG00000018167	SBDS	98	56.504	Ailuropoda_melanoleuca
WBGene00021063	sbds-1	97	57.831	ENSACIG00000007308	sbds	98	57.831	Amphilophus_citrinellus
WBGene00021063	sbds-1	97	57.317	ENSAOCG00000016770	sbds	98	57.317	Amphiprion_ocellaris
WBGene00021063	sbds-1	97	57.724	ENSAPEG00000015897	sbds	98	57.724	Amphiprion_percula
WBGene00021063	sbds-1	97	58.130	ENSATEG00000006901	sbds	98	58.130	Anabas_testudineus
WBGene00021063	sbds-1	81	52.941	ENSANAG00000037501	-	98	52.941	Aotus_nancymaae
WBGene00021063	sbds-1	91	52.609	ENSANAG00000024342	-	94	69.512	Aotus_nancymaae
WBGene00021063	sbds-1	97	58.537	ENSACLG00000018750	sbds	98	58.537	Astatotilapia_calliptera
WBGene00021063	sbds-1	97	58.130	ENSAMXG00000005361	sbds	98	58.130	Astyanax_mexicanus
WBGene00021063	sbds-1	97	57.724	ENSBTAG00000004051	SBDS	98	57.724	Bos_taurus
WBGene00021063	sbds-1	97	57.317	ENSCJAG00000041007	SBDS	98	57.317	Callithrix_jacchus
WBGene00021063	sbds-1	97	55.645	ENSCAFG00000010797	SBDS	98	55.645	Canis_familiaris
WBGene00021063	sbds-1	97	56.504	ENSCAFG00020005357	SBDS	98	56.504	Canis_lupus_dingo
WBGene00021063	sbds-1	97	57.317	ENSCHIG00000026854	SBDS	98	57.317	Capra_hircus
WBGene00021063	sbds-1	97	56.911	ENSTSYG00000033822	SBDS	98	56.911	Carlito_syrichta
WBGene00021063	sbds-1	64	49.068	ENSCAPG00000006634	SBDS	98	49.068	Cavia_aperea
WBGene00021063	sbds-1	97	58.130	ENSCPOG00000036143	SBDS	98	58.130	Cavia_porcellus
WBGene00021063	sbds-1	97	56.911	ENSCCAG00000020671	SBDS	92	75.610	Cebus_capucinus
WBGene00021063	sbds-1	97	56.911	ENSCATG00000039026	SBDS	98	56.911	Cercocebus_atys
WBGene00021063	sbds-1	97	58.537	ENSCLAG00000005721	-	98	58.537	Chinchilla_lanigera
WBGene00021063	sbds-1	97	41.870	ENSCLAG00000002113	-	98	41.870	Chinchilla_lanigera
WBGene00021063	sbds-1	97	56.911	ENSCSAG00000018275	SBDS	98	56.911	Chlorocebus_sabaeus
WBGene00021063	sbds-1	97	53.659	ENSCHOG00000003795	SBDS	98	53.659	Choloepus_hoffmanni
WBGene00021063	sbds-1	97	58.130	ENSCPBG00000014893	SBDS	98	58.130	Chrysemys_picta_bellii
WBGene00021063	sbds-1	97	55.466	ENSCSAVG00000011811	-	98	55.466	Ciona_savignyi
WBGene00021063	sbds-1	97	56.911	ENSCANG00000032368	SBDS	98	56.911	Colobus_angolensis_palliatus
WBGene00021063	sbds-1	64	48.447	ENSCGRG00001019886	Sbds	98	48.447	Cricetulus_griseus_chok1gshd
WBGene00021063	sbds-1	81	53.922	ENSCGRG00000009211	Sbds	98	53.922	Cricetulus_griseus_crigri
WBGene00021063	sbds-1	97	55.691	ENSCSEG00000005798	sbds	98	55.691	Cynoglossus_semilaevis
WBGene00021063	sbds-1	97	58.130	ENSCVAG00000001053	sbds	98	58.130	Cyprinodon_variegatus
WBGene00021063	sbds-1	97	58.537	ENSDARG00000027803	sbds	98	58.537	Danio_rerio
WBGene00021063	sbds-1	97	56.504	ENSDNOG00000041174	SBDS	98	56.504	Dasypus_novemcinctus
WBGene00021063	sbds-1	97	57.724	ENSDORG00000026218	Sbds	98	57.724	Dipodomys_ordii
WBGene00021063	sbds-1	91	57.021	FBgn0035714	CG8549	99	57.708	Drosophila_melanogaster
WBGene00021063	sbds-1	82	50.242	ENSEBUG00000015780	sbds	92	50.242	Eptatretus_burgeri
WBGene00021063	sbds-1	97	56.911	ENSEASG00005008821	SBDS	98	56.911	Equus_asinus_asinus
WBGene00021063	sbds-1	97	56.911	ENSECAG00000008202	SBDS	98	56.911	Equus_caballus
WBGene00021063	sbds-1	79	42.289	ENSEEUG00000004768	SBDS	97	42.289	Erinaceus_europaeus
WBGene00021063	sbds-1	97	56.098	ENSELUG00000008382	sbds	98	56.098	Esox_lucius
WBGene00021063	sbds-1	97	56.911	ENSFCAG00000022142	SBDS	98	56.911	Felis_catus
WBGene00021063	sbds-1	97	58.130	ENSFALG00000013808	SBDS	98	58.130	Ficedula_albicollis
WBGene00021063	sbds-1	97	58.130	ENSFDAG00000018947	-	98	58.130	Fukomys_damarensis
WBGene00021063	sbds-1	97	56.504	ENSFHEG00000000708	sbds	98	56.504	Fundulus_heteroclitus
WBGene00021063	sbds-1	97	54.878	ENSGMOG00000018356	sbds	97	54.878	Gadus_morhua
WBGene00021063	sbds-1	97	58.537	ENSGALG00000027989	SBDS	98	58.537	Gallus_gallus
WBGene00021063	sbds-1	90	55.702	ENSGAFG00000014204	sbds	99	56.140	Gambusia_affinis
WBGene00021063	sbds-1	97	58.130	ENSGACG00000012697	sbds	98	58.130	Gasterosteus_aculeatus
WBGene00021063	sbds-1	83	55.450	ENSGAGG00000022402	SBDS	98	55.450	Gopherus_agassizii
WBGene00021063	sbds-1	93	44.068	ENSGGOG00000040023	-	90	44.068	Gorilla_gorilla
WBGene00021063	sbds-1	97	58.537	ENSHBUG00000002660	sbds	98	58.537	Haplochromis_burtoni
WBGene00021063	sbds-1	97	57.317	ENSHGLG00000009671	SBDS	98	57.317	Heterocephalus_glaber_female
WBGene00021063	sbds-1	97	57.317	ENSHGLG00100011332	SBDS	98	57.317	Heterocephalus_glaber_male
WBGene00021063	sbds-1	97	54.472	ENSHCOG00000018606	sbds	98	54.472	Hippocampus_comes
WBGene00021063	sbds-1	97	56.911	ENSIPUG00000006536	sbds	98	56.911	Ictalurus_punctatus
WBGene00021063	sbds-1	97	47.791	ENSJJAG00000003934	-	98	47.791	Jaculus_jaculus
WBGene00021063	sbds-1	97	57.143	ENSJJAG00000012033	-	98	57.143	Jaculus_jaculus
WBGene00021063	sbds-1	97	58.537	ENSKMAG00000018542	sbds	98	58.537	Kryptolebias_marmoratus
WBGene00021063	sbds-1	97	58.943	ENSLBEG00000016687	sbds	98	58.943	Labrus_bergylta
WBGene00021063	sbds-1	97	48.235	ENSLACG00000018916	SBDS	98	48.235	Latimeria_chalumnae
WBGene00021063	sbds-1	97	56.911	ENSLOCG00000004073	sbds	98	56.911	Lepisosteus_oculatus
WBGene00021063	sbds-1	97	56.911	ENSLAFG00000008763	SBDS	98	56.911	Loxodonta_africana
WBGene00021063	sbds-1	97	56.911	ENSMFAG00000032620	SBDS	98	56.911	Macaca_fascicularis
WBGene00021063	sbds-1	97	56.911	ENSMMUG00000045653	SBDS	98	56.911	Macaca_mulatta
WBGene00021063	sbds-1	97	56.911	ENSMNEG00000031523	SBDS	98	56.911	Macaca_nemestrina
WBGene00021063	sbds-1	97	47.200	ENSMLEG00000036826	SBDS	98	47.200	Mandrillus_leucophaeus
WBGene00021063	sbds-1	97	58.537	ENSMAMG00000016062	sbds	98	58.537	Mastacembelus_armatus
WBGene00021063	sbds-1	97	58.537	ENSMZEG00005024385	sbds	98	58.537	Maylandia_zebra
WBGene00021063	sbds-1	97	58.537	ENSMGAG00000002119	SBDS	98	58.537	Meleagris_gallopavo
WBGene00021063	sbds-1	97	47.967	ENSMAUG00000022214	-	98	47.967	Mesocricetus_auratus
WBGene00021063	sbds-1	97	57.317	ENSMICG00000014366	SBDS	92	72.414	Microcebus_murinus
WBGene00021063	sbds-1	97	58.130	ENSMOCG00000011739	Sbds	98	58.130	Microtus_ochrogaster
WBGene00021063	sbds-1	97	51.220	ENSMMOG00000005061	sbds	98	51.220	Mola_mola
WBGene00021063	sbds-1	97	57.724	ENSMODG00000006644	SBDS	98	57.724	Monodelphis_domestica
WBGene00021063	sbds-1	97	58.943	ENSMALG00000010219	sbds	98	58.943	Monopterus_albus
WBGene00021063	sbds-1	97	58.130	MGP_CAROLIEiJ_G0027800	Sbds	93	80.000	Mus_caroli
WBGene00021063	sbds-1	97	58.130	ENSMUSG00000025337	Sbds	93	80.000	Mus_musculus
WBGene00021063	sbds-1	97	58.130	MGP_PahariEiJ_G0024384	Sbds	93	80.000	Mus_pahari
WBGene00021063	sbds-1	97	58.130	MGP_SPRETEiJ_G0028798	Sbds	93	80.000	Mus_spretus
WBGene00021063	sbds-1	65	47.879	ENSMPUG00000016192	SBDS	94	47.879	Mustela_putorius_furo
WBGene00021063	sbds-1	71	48.603	ENSMLUG00000013575	SBDS	98	48.603	Myotis_lucifugus
WBGene00021063	sbds-1	97	58.130	ENSNGAG00000012093	Sbds	98	58.130	Nannospalax_galili
WBGene00021063	sbds-1	97	58.537	ENSNBRG00000017027	sbds	98	58.537	Neolamprologus_brichardi
WBGene00021063	sbds-1	97	56.911	ENSNLEG00000013288	SBDS	87	76.190	Nomascus_leucogenys
WBGene00021063	sbds-1	97	57.317	ENSOPRG00000008721	SBDS	98	57.317	Ochotona_princeps
WBGene00021063	sbds-1	96	53.498	ENSODEG00000019253	-	81	53.498	Octodon_degus
WBGene00021063	sbds-1	97	44.309	ENSODEG00000000137	-	83	45.528	Octodon_degus
WBGene00021063	sbds-1	97	45.935	ENSODEG00000001116	-	98	45.935	Octodon_degus
WBGene00021063	sbds-1	97	58.130	ENSONIG00000005874	sbds	98	58.130	Oreochromis_niloticus
WBGene00021063	sbds-1	81	52.941	ENSOANG00000007674	-	98	52.941	Ornithorhynchus_anatinus
WBGene00021063	sbds-1	97	58.130	ENSOCUG00000003170	SBDS	98	58.130	Oryctolagus_cuniculus
WBGene00021063	sbds-1	97	59.350	ENSORLG00000023489	sbds	98	59.350	Oryzias_latipes
WBGene00021063	sbds-1	97	59.350	ENSORLG00020019282	sbds	98	59.350	Oryzias_latipes_hni
WBGene00021063	sbds-1	97	59.350	ENSORLG00015008005	sbds	98	59.350	Oryzias_latipes_hsok
WBGene00021063	sbds-1	97	60.163	ENSOMEG00000022747	sbds	98	60.163	Oryzias_melastigma
WBGene00021063	sbds-1	97	57.317	ENSOGAG00000009011	-	98	57.317	Otolemur_garnettii
WBGene00021063	sbds-1	94	49.789	ENSOGAG00000015036	-	94	49.789	Otolemur_garnettii
WBGene00021063	sbds-1	97	57.317	ENSOARG00000010609	SBDS	98	57.317	Ovis_aries
WBGene00021063	sbds-1	97	56.098	ENSPPAG00000043889	-	98	56.098	Pan_paniscus
WBGene00021063	sbds-1	97	56.911	ENSPPRG00000002307	SBDS	98	56.911	Panthera_pardus
WBGene00021063	sbds-1	97	56.911	ENSPTIG00000021308	SBDS	98	56.911	Panthera_tigris_altaica
WBGene00021063	sbds-1	79	57.214	ENSPTRG00000048174	-	89	57.214	Pan_troglodytes
WBGene00021063	sbds-1	97	47.561	ENSPTRG00000047744	-	98	47.561	Pan_troglodytes
WBGene00021063	sbds-1	97	47.561	ENSPTRG00000050835	-	98	47.561	Pan_troglodytes
WBGene00021063	sbds-1	97	56.911	ENSPTRG00000019254	SBDS	98	56.911	Pan_troglodytes
WBGene00021063	sbds-1	97	56.911	ENSPANG00000004078	SBDS	98	56.911	Papio_anubis
WBGene00021063	sbds-1	97	59.756	ENSPKIG00000006489	sbds	98	59.756	Paramormyrops_kingsleyae
WBGene00021063	sbds-1	81	56.098	ENSPSIG00000014603	SBDS	98	56.098	Pelodiscus_sinensis
WBGene00021063	sbds-1	97	58.537	ENSPMGG00000004246	sbds	98	58.537	Periophthalmus_magnuspinnatus
WBGene00021063	sbds-1	97	58.130	ENSPEMG00000008728	Sbds	98	58.130	Peromyscus_maniculatus_bairdii
WBGene00021063	sbds-1	97	58.130	ENSPCIG00000029718	SBDS	98	58.130	Phascolarctos_cinereus
WBGene00021063	sbds-1	97	58.537	ENSPFOG00000015837	sbds	98	58.943	Poecilia_formosa
WBGene00021063	sbds-1	97	58.537	ENSPLAG00000003641	sbds	98	58.943	Poecilia_latipinna
WBGene00021063	sbds-1	97	58.537	ENSPMEG00000019483	sbds	98	58.943	Poecilia_mexicana
WBGene00021063	sbds-1	97	58.537	ENSPREG00000018758	sbds	98	58.943	Poecilia_reticulata
WBGene00021063	sbds-1	97	56.911	ENSPPYG00000017513	SBDS	98	56.911	Pongo_abelii
WBGene00021063	sbds-1	97	57.317	ENSPCOG00000021098	SBDS	92	72.414	Propithecus_coquereli
WBGene00021063	sbds-1	97	56.911	ENSPVAG00000009369	SBDS	98	56.911	Pteropus_vampyrus
WBGene00021063	sbds-1	97	58.130	ENSPNYG00000022403	sbds	98	58.130	Pundamilia_nyererei
WBGene00021063	sbds-1	97	57.317	ENSPNAG00000001120	sbds	98	57.317	Pygocentrus_nattereri
WBGene00021063	sbds-1	97	58.130	ENSRNOG00000000888	Sbds	98	58.130	Rattus_norvegicus
WBGene00021063	sbds-1	97	56.911	ENSRBIG00000035557	SBDS	98	56.911	Rhinopithecus_bieti
WBGene00021063	sbds-1	97	46.748	ENSRROG00000041986	-	98	46.748	Rhinopithecus_roxellana
WBGene00021063	sbds-1	97	56.911	ENSRROG00000040842	-	98	56.911	Rhinopithecus_roxellana
WBGene00021063	sbds-1	88	41.631	YLR022C	-	91	41.631	Saccharomyces_cerevisiae
WBGene00021063	sbds-1	91	55.459	ENSSBOG00000022460	SBDS	98	55.459	Saimiri_boliviensis_boliviensis
WBGene00021063	sbds-1	97	47.967	ENSSHAG00000010263	SBDS	98	47.967	Sarcophilus_harrisii
WBGene00021063	sbds-1	97	59.756	ENSSFOG00015001108	sbds	98	59.756	Scleropages_formosus
WBGene00021063	sbds-1	97	57.724	ENSSMAG00000020506	sbds	98	57.724	Scophthalmus_maximus
WBGene00021063	sbds-1	97	57.724	ENSSDUG00000001528	sbds	98	57.724	Seriola_dumerili
WBGene00021063	sbds-1	97	57.724	ENSSLDG00000003659	sbds	98	57.724	Seriola_lalandi_dorsalis
WBGene00021063	sbds-1	70	76.190	ENSSARG00000001899	-	71	76.190	Sorex_araneus
WBGene00021063	sbds-1	60	61.184	ENSSARG00000013132	-	99	61.184	Sorex_araneus
WBGene00021063	sbds-1	97	56.504	ENSSPUG00000002699	SBDS	98	56.504	Sphenodon_punctatus
WBGene00021063	sbds-1	97	57.724	ENSSPAG00000016419	sbds	98	50.813	Stegastes_partitus
WBGene00021063	sbds-1	97	57.317	ENSSSCG00000007732	SBDS	98	57.317	Sus_scrofa
WBGene00021063	sbds-1	64	51.553	ENSTGUG00000003426	SBDS	96	51.553	Taeniopygia_guttata
WBGene00021063	sbds-1	97	57.724	ENSTRUG00000021443	sbds	98	57.724	Takifugu_rubripes
WBGene00021063	sbds-1	97	56.911	ENSTNIG00000019000	sbds	98	56.911	Tetraodon_nigroviridis
WBGene00021063	sbds-1	79	49.751	ENSTBEG00000001178	SBDS	96	49.751	Tupaia_belangeri
WBGene00021063	sbds-1	97	49.187	ENSTTRG00000003921	SBDS	98	49.187	Tursiops_truncatus
WBGene00021063	sbds-1	97	56.504	ENSUAMG00000001326	SBDS	98	56.504	Ursus_americanus
WBGene00021063	sbds-1	97	56.504	ENSUMAG00000015353	SBDS	98	56.504	Ursus_maritimus
WBGene00021063	sbds-1	97	56.504	ENSVVUG00000016478	SBDS	98	56.504	Vulpes_vulpes
WBGene00021063	sbds-1	97	57.724	ENSXETG00000010093	sbds	98	57.724	Xenopus_tropicalis
WBGene00021063	sbds-1	97	52.439	ENSXCOG00000010639	sbds	98	52.439	Xiphophorus_couchianus
WBGene00021063	sbds-1	97	58.130	ENSXMAG00000006065	sbds	98	58.537	Xiphophorus_maculatus