EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00021277 (Gene tree)
Gene ID: -
Gene Symbol: Y23H5B.6
Alias: -
Full Name: RNA helicase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 7396 bases
Position: chrI:2489976-2497371
Accession: Q9N478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y23H5B	ResIII	PF04851.15	2.1e-06	1	1
Y23H5B	DEAD	PF00270.29	4.1e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y23H5B.6b	-	1108	NM_001306360	Y23H5B.6b	317 (aa)	NP_001293289	A0A061ACL9
Y23H5B.6c	-	1108	NM_001306360	Y23H5B.6c	278 (aa)	NP_001293289	A0A061ADT4
Y23H5B.6a	-	2317	NM_058588	Y23H5B.6a	732 (aa)	NP_490989	Q9N478

Gene Model

Click here to download WBGene00021277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021277's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00021277	Y23H5B.6	51	30.319	WBGene00018007	F33D11.10	92	30.319
WBGene00021277	Y23H5B.6	52	31.387	WBGene00011032	R05D11.4	66	31.990
WBGene00021277	Y23H5B.6	62	35.512	WBGene00015232	B0511.6	83	35.512
WBGene00021277	Y23H5B.6	50	31.527	WBGene00018890	F55F8.2	54	31.527
WBGene00021277	Y23H5B.6	50	35.185	WBGene00019219	H20J04.4	71	36.261
WBGene00021277	Y23H5B.6	59	31.306	WBGene00013983	ZK512.2	76	31.293
WBGene00021277	Y23H5B.6	51	30.585	WBGene00022029	Y65B4A.6	92	30.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021277	Y23H5B.6	63	53.043	ENSG00000178105	DDX10	66	53.880	Homo_sapiens
WBGene00021277	Y23H5B.6	87	51.592	ENSAPOG00000009242	ddx10	87	42.857	Acanthochromis_polyacanthus
WBGene00021277	Y23H5B.6	62	52.954	ENSAMEG00000009232	DDX10	69	53.437	Ailuropoda_melanoleuca
WBGene00021277	Y23H5B.6	64	51.592	ENSAOCG00000021917	ddx10	86	43.817	Amphiprion_ocellaris
WBGene00021277	Y23H5B.6	65	51.148	ENSAPEG00000022230	ddx10	86	44.070	Amphiprion_percula
WBGene00021277	Y23H5B.6	89	50.199	ENSATEG00000007227	ddx10	87	41.987	Anabas_testudineus
WBGene00021277	Y23H5B.6	62	54.525	ENSAPLG00000011942	DDX10	61	54.525	Anas_platyrhynchos
WBGene00021277	Y23H5B.6	67	51.844	ENSACAG00000005173	DDX10	63	52.654	Anolis_carolinensis
WBGene00021277	Y23H5B.6	81	52.954	ENSANAG00000020864	DDX10	62	53.215	Aotus_nancymaae
WBGene00021277	Y23H5B.6	66	51.139	ENSAMXG00000006135	ddx10	55	53.437	Astyanax_mexicanus
WBGene00021277	Y23H5B.6	82	52.174	ENSBTAG00000002382	DDX10	51	52.772	Bos_taurus
WBGene00021277	Y23H5B.6	81	52.632	ENSCJAG00000010281	DDX10	52	52.993	Callithrix_jacchus
WBGene00021277	Y23H5B.6	62	52.298	ENSCAFG00000014324	DDX10	52	52.550	Canis_familiaris
WBGene00021277	Y23H5B.6	62	52.298	ENSCAFG00020007058	DDX10	52	52.550	Canis_lupus_dingo
WBGene00021277	Y23H5B.6	63	52.391	ENSCHIG00000015147	DDX10	51	52.993	Capra_hircus
WBGene00021277	Y23H5B.6	63	53.348	ENSTSYG00000003184	DDX10	52	53.880	Carlito_syrichta
WBGene00021277	Y23H5B.6	66	47.727	ENSCPOG00000000865	DDX10	72	50.111	Cavia_porcellus
WBGene00021277	Y23H5B.6	81	52.735	ENSCCAG00000024209	DDX10	51	53.215	Cebus_capucinus
WBGene00021277	Y23H5B.6	62	53.392	ENSCATG00000028487	DDX10	65	53.880	Cercocebus_atys
WBGene00021277	Y23H5B.6	64	51.812	ENSCLAG00000013463	DDX10	51	53.659	Chinchilla_lanigera
WBGene00021277	Y23H5B.6	57	48.148	ENSCHOG00000001537	DDX10	68	52.083	Choloepus_hoffmanni
WBGene00021277	Y23H5B.6	66	52.577	ENSCPBG00000021681	DDX10	70	53.632	Chrysemys_picta_bellii
WBGene00021277	Y23H5B.6	83	45.098	ENSCING00000021618	-	82	44.316	Ciona_intestinalis
WBGene00021277	Y23H5B.6	61	51.778	ENSCSAVG00000003023	-	80	51.778	Ciona_savignyi
WBGene00021277	Y23H5B.6	62	53.173	ENSCANG00000027716	DDX10	52	53.659	Colobus_angolensis_palliatus
WBGene00021277	Y23H5B.6	80	52.268	ENSCGRG00001007099	Ddx10	73	53.691	Cricetulus_griseus_chok1gshd
WBGene00021277	Y23H5B.6	80	52.268	ENSCGRG00000000153	Ddx10	73	53.691	Cricetulus_griseus_crigri
WBGene00021277	Y23H5B.6	65	51.046	ENSCSEG00000002080	ddx10	84	43.917	Cynoglossus_semilaevis
WBGene00021277	Y23H5B.6	86	45.840	ENSCVAG00000000109	ddx10	85	45.263	Cyprinodon_variegatus
WBGene00021277	Y23H5B.6	63	53.145	ENSDARG00000061865	ddx10	53	53.145	Danio_rerio
WBGene00021277	Y23H5B.6	66	49.689	ENSDNOG00000012542	DDX10	71	50.000	Dasypus_novemcinctus
WBGene00021277	Y23H5B.6	97	39.820	FBgn0030855	CG5800	90	40.678	Drosophila_melanogaster
WBGene00021277	Y23H5B.6	73	46.182	ENSEBUG00000007794	ddx10	70	51.570	Eptatretus_burgeri
WBGene00021277	Y23H5B.6	62	52.954	ENSEASG00005010110	DDX10	74	53.437	Equus_asinus_asinus
WBGene00021277	Y23H5B.6	62	52.954	ENSECAG00000010355	DDX10	79	53.437	Equus_caballus
WBGene00021277	Y23H5B.6	62	48.578	ENSEEUG00000011164	DDX10	52	48.894	Erinaceus_europaeus
WBGene00021277	Y23H5B.6	74	48.540	ENSELUG00000014515	ddx10	54	52.258	Esox_lucius
WBGene00021277	Y23H5B.6	62	52.954	ENSFCAG00000007246	DDX10	73	53.437	Felis_catus
WBGene00021277	Y23H5B.6	54	53.030	ENSFALG00000000449	DDX10	76	53.030	Ficedula_albicollis
WBGene00021277	Y23H5B.6	86	45.015	ENSFHEG00000011340	ddx10	87	44.663	Fundulus_heteroclitus
WBGene00021277	Y23H5B.6	92	42.544	ENSGAFG00000011210	ddx10	84	44.380	Gambusia_affinis
WBGene00021277	Y23H5B.6	95	43.236	ENSGACG00000002948	ddx10	86	43.430	Gasterosteus_aculeatus
WBGene00021277	Y23H5B.6	97	41.816	ENSGAGG00000023967	DDX10	91	41.724	Gopherus_agassizii
WBGene00021277	Y23H5B.6	62	44.639	ENSGGOG00000043095	-	50	45.011	Gorilla_gorilla
WBGene00021277	Y23H5B.6	62	51.754	ENSGGOG00000043387	-	73	52.222	Gorilla_gorilla
WBGene00021277	Y23H5B.6	62	53.173	ENSGGOG00000000271	-	52	53.659	Gorilla_gorilla
WBGene00021277	Y23H5B.6	63	52.174	ENSHGLG00100003298	DDX10	64	52.993	Heterocephalus_glaber_male
WBGene00021277	Y23H5B.6	87	43.079	ENSHCOG00000010943	ddx10	86	43.447	Hippocampus_comes
WBGene00021277	Y23H5B.6	60	40.091	ENSIPUG00000012876	ddx18	75	40.091	Ictalurus_punctatus
WBGene00021277	Y23H5B.6	90	42.192	ENSIPUG00000024738	ddx10	82	42.156	Ictalurus_punctatus
WBGene00021277	Y23H5B.6	63	53.043	ENSSTOG00000005213	DDX10	73	52.691	Ictidomys_tridecemlineatus
WBGene00021277	Y23H5B.6	83	50.749	ENSJJAG00000014261	Ddx10	52	51.663	Jaculus_jaculus
WBGene00021277	Y23H5B.6	71	49.333	ENSKMAG00000001578	ddx10	87	43.526	Kryptolebias_marmoratus
WBGene00021277	Y23H5B.6	86	44.709	ENSLBEG00000011602	ddx10	84	43.750	Labrus_bergylta
WBGene00021277	Y23H5B.6	72	50.189	ENSLOCG00000002074	ddx10	63	52.842	Lepisosteus_oculatus
WBGene00021277	Y23H5B.6	63	52.700	ENSLAFG00000005951	DDX10	70	53.524	Loxodonta_africana
WBGene00021277	Y23H5B.6	62	53.392	ENSMMUG00000014415	DDX10	52	53.880	Macaca_mulatta
WBGene00021277	Y23H5B.6	62	53.392	ENSMNEG00000033513	DDX10	52	53.880	Macaca_nemestrina
WBGene00021277	Y23H5B.6	62	53.392	ENSMLEG00000044081	DDX10	65	53.880	Mandrillus_leucophaeus
WBGene00021277	Y23H5B.6	65	51.566	ENSMAMG00000022111	ddx10	83	41.896	Mastacembelus_armatus
WBGene00021277	Y23H5B.6	63	54.310	ENSMGAG00000015145	DDX10	76	54.767	Meleagris_gallopavo
WBGene00021277	Y23H5B.6	62	53.173	ENSMICG00000035071	DDX10	73	53.659	Microcebus_murinus
WBGene00021277	Y23H5B.6	86	52.700	ENSMOCG00000009915	Ddx10	52	53.659	Microtus_ochrogaster
WBGene00021277	Y23H5B.6	88	41.831	ENSMMOG00000009042	ddx10	85	42.254	Mola_mola
WBGene00021277	Y23H5B.6	87	48.218	ENSMODG00000014600	DDX10	70	53.452	Monodelphis_domestica
WBGene00021277	Y23H5B.6	65	51.255	ENSMALG00000021441	ddx10	85	42.734	Monopterus_albus
WBGene00021277	Y23H5B.6	63	52.916	MGP_CAROLIEiJ_G0032212	Ddx10	52	53.659	Mus_caroli
WBGene00021277	Y23H5B.6	63	52.916	ENSMUSG00000053289	Ddx10	52	53.659	Mus_musculus
WBGene00021277	Y23H5B.6	85	52.916	MGP_PahariEiJ_G0015080	Ddx10	52	53.659	Mus_pahari
WBGene00021277	Y23H5B.6	63	52.916	MGP_SPRETEiJ_G0033352	Ddx10	52	53.659	Mus_spretus
WBGene00021277	Y23H5B.6	62	52.954	ENSMPUG00000005921	DDX10	52	53.437	Mustela_putorius_furo
WBGene00021277	Y23H5B.6	64	49.356	ENSMLUG00000001645	DDX10	67	50.333	Myotis_lucifugus
WBGene00021277	Y23H5B.6	85	53.132	ENSNGAG00000010526	Ddx10	52	53.761	Nannospalax_galili
WBGene00021277	Y23H5B.6	81	52.735	ENSNLEG00000007242	DDX10	52	53.215	Nomascus_leucogenys
WBGene00021277	Y23H5B.6	66	39.709	ENSOPRG00000004266	DDX10	55	40.576	Ochotona_princeps
WBGene00021277	Y23H5B.6	69	50.884	ENSOANG00000006243	DDX10	70	54.241	Ornithorhynchus_anatinus
WBGene00021277	Y23H5B.6	62	53.173	ENSOCUG00000003843	DDX10	73	53.540	Oryctolagus_cuniculus
WBGene00021277	Y23H5B.6	86	43.062	ENSORLG00000003073	ddx10	84	44.242	Oryzias_latipes
WBGene00021277	Y23H5B.6	86	44.092	ENSORLG00015002672	ddx10	85	44.429	Oryzias_latipes_hsok
WBGene00021277	Y23H5B.6	64	52.979	ENSOMEG00000007443	ddx10	87	43.889	Oryzias_melastigma
WBGene00021277	Y23H5B.6	62	53.947	ENSOGAG00000010962	DDX10	68	54.688	Otolemur_garnettii
WBGene00021277	Y23H5B.6	63	51.724	ENSOARG00000012714	DDX10	68	52.308	Ovis_aries
WBGene00021277	Y23H5B.6	62	45.514	ENSPPAG00000032506	-	50	45.898	Pan_paniscus
WBGene00021277	Y23H5B.6	62	53.173	ENSPPAG00000035222	DDX10	51	53.659	Pan_paniscus
WBGene00021277	Y23H5B.6	62	52.954	ENSPPRG00000005990	DDX10	73	53.437	Panthera_pardus
WBGene00021277	Y23H5B.6	62	52.954	ENSPTIG00000010152	DDX10	73	53.437	Panthera_tigris_altaica
WBGene00021277	Y23H5B.6	62	53.173	ENSPTRG00000004256	DDX10	51	53.659	Pan_troglodytes
WBGene00021277	Y23H5B.6	62	45.952	ENSPTRG00000047351	-	50	46.341	Pan_troglodytes
WBGene00021277	Y23H5B.6	62	53.173	ENSPANG00000015325	DDX10	65	53.659	Papio_anubis
WBGene00021277	Y23H5B.6	61	43.488	ENSPANG00000029813	-	51	44.218	Papio_anubis
WBGene00021277	Y23H5B.6	68	52.323	ENSPKIG00000015739	ddx10	85	43.338	Paramormyrops_kingsleyae
WBGene00021277	Y23H5B.6	85	50.813	ENSPSIG00000014874	DDX10	79	54.907	Pelodiscus_sinensis
WBGene00021277	Y23H5B.6	89	43.324	ENSPMGG00000008344	ddx10	85	42.614	Periophthalmus_magnuspinnatus
WBGene00021277	Y23H5B.6	63	49.460	ENSPEMG00000017492	Ddx10	52	50.111	Peromyscus_maniculatus_bairdii
WBGene00021277	Y23H5B.6	90	50.299	ENSPCIG00000003013	DDX10	86	54.094	Phascolarctos_cinereus
WBGene00021277	Y23H5B.6	87	44.139	ENSPFOG00000013021	ddx10	84	43.849	Poecilia_formosa
WBGene00021277	Y23H5B.6	87	44.284	ENSPLAG00000009048	ddx10	84	43.994	Poecilia_latipinna
WBGene00021277	Y23H5B.6	87	43.994	ENSPMEG00000004541	ddx10	84	43.994	Poecilia_mexicana
WBGene00021277	Y23H5B.6	87	44.573	ENSPREG00000019559	ddx10	83	44.863	Poecilia_reticulata
WBGene00021277	Y23H5B.6	81	53.392	ENSPPYG00000003849	DDX10	52	53.880	Pongo_abelii
WBGene00021277	Y23H5B.6	64	42.463	ENSPCAG00000012949	DDX10	54	42.463	Procavia_capensis
WBGene00021277	Y23H5B.6	70	60.656	ENSPCOG00000020289	DDX10	70	60.656	Propithecus_coquereli
WBGene00021277	Y23H5B.6	62	47.702	ENSPVAG00000007371	DDX10	51	48.115	Pteropus_vampyrus
WBGene00021277	Y23H5B.6	62	53.319	ENSPNAG00000017154	ddx10	56	53.319	Pygocentrus_nattereri
WBGene00021277	Y23H5B.6	85	52.700	ENSRNOG00000012500	Ddx10	52	53.437	Rattus_norvegicus
WBGene00021277	Y23H5B.6	62	51.082	ENSRBIG00000040612	DDX10	64	51.535	Rhinopithecus_bieti
WBGene00021277	Y23H5B.6	62	53.173	ENSRROG00000031744	DDX10	52	53.659	Rhinopithecus_roxellana
WBGene00021277	Y23H5B.6	66	45.102	YJL033W	HCA4	62	45.607	Saccharomyces_cerevisiae
WBGene00021277	Y23H5B.6	63	53.261	ENSSBOG00000022735	DDX10	66	53.880	Saimiri_boliviensis_boliviensis
WBGene00021277	Y23H5B.6	95	40.944	ENSSFOG00015007982	ddx10	84	42.618	Scleropages_formosus
WBGene00021277	Y23H5B.6	79	53.509	ENSSMAG00000018735	ddx10	85	42.639	Scophthalmus_maximus
WBGene00021277	Y23H5B.6	77	53.947	ENSSDUG00000018245	ddx10	54	53.377	Seriola_dumerili
WBGene00021277	Y23H5B.6	77	53.728	ENSSLDG00000012041	ddx10	54	53.159	Seriola_lalandi_dorsalis
WBGene00021277	Y23H5B.6	61	53.468	ENSSARG00000004103	DDX10	51	53.468	Sorex_araneus
WBGene00021277	Y23H5B.6	69	48.928	ENSSPUG00000017612	DDX10	84	41.655	Sphenodon_punctatus
WBGene00021277	Y23H5B.6	64	52.229	ENSSPAG00000015548	ddx10	77	52.229	Stegastes_partitus
WBGene00021277	Y23H5B.6	85	51.581	ENSTGUG00000012605	DDX10	76	54.767	Taeniopygia_guttata
WBGene00021277	Y23H5B.6	87	43.040	ENSTRUG00000010881	ddx10	84	42.857	Takifugu_rubripes
WBGene00021277	Y23H5B.6	87	41.714	ENSTNIG00000010477	ddx10	85	41.714	Tetraodon_nigroviridis
WBGene00021277	Y23H5B.6	63	46.204	ENSTBEG00000006321	DDX10	55	46.889	Tupaia_belangeri
WBGene00021277	Y23H5B.6	81	43.545	ENSTTRG00000006068	DDX10	51	43.902	Tursiops_truncatus
WBGene00021277	Y23H5B.6	58	53.882	ENSUAMG00000014176	DDX10	85	53.882	Ursus_americanus
WBGene00021277	Y23H5B.6	62	52.954	ENSUMAG00000007300	DDX10	55	53.437	Ursus_maritimus
WBGene00021277	Y23H5B.6	79	51.927	ENSVPAG00000010185	DDX10	55	51.927	Vicugna_pacos
WBGene00021277	Y23H5B.6	62	52.516	ENSVVUG00000015484	DDX10	55	52.772	Vulpes_vulpes
WBGene00021277	Y23H5B.6	64	53.928	ENSXETG00000014458	ddx10	69	53.928	Xenopus_tropicalis
WBGene00021277	Y23H5B.6	87	44.573	ENSXCOG00000003080	ddx10	87	44.718	Xiphophorus_couchianus
WBGene00021277	Y23H5B.6	87	44.573	ENSXMAG00000016515	ddx10	84	45.297	Xiphophorus_maculatus