EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00021365 (Gene tree)
Gene ID: -
Gene Symbol: smgl-2
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 9384 bases
Position: chrIV:3726112-3735495
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y37E11AM	HA2	PF04408.23	3.8e-09	1	1
Y37E11AM	HA2	PF04408.23	3.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y37E11AM.1b	-	2641	NM_001307446	Y37E11AM.1b	844 (aa)	NP_001294375	U4PEF8
Y37E11AM.1a	-	3372	NM_001307445	Y37E11AM.1a	1089 (aa)	NP_001294374	U4PRA5

Gene Model

Click here to download WBGene00021365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021365's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00021365	smgl-2	55	33.076	WBGene00020263	let-355	73	33.076
WBGene00021365	smgl-2	51	31.637	WBGene00022056	ddx-35	73	33.868
WBGene00021365	smgl-2	51	32.534	WBGene00018967	ddx-15	78	33.275
WBGene00021365	smgl-2	60	32.579	WBGene00003393	mog-5	50	32.704
WBGene00021365	smgl-2	51	34.561	WBGene00003392	mog-4	54	34.561

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021365	smgl-2	81	42.248	ENSG00000134815	DHX34	90	32.530	Homo_sapiens
WBGene00021365	smgl-2	86	41.723	ENSAPOG00000012602	dhx34	75	45.150	Acanthochromis_polyacanthus
WBGene00021365	smgl-2	82	41.808	ENSAMEG00000008270	DHX34	73	44.235	Ailuropoda_melanoleuca
WBGene00021365	smgl-2	86	42.154	ENSACIG00000024038	dhx34	75	45.350	Amphilophus_citrinellus
WBGene00021365	smgl-2	86	41.992	ENSAOCG00000006310	dhx34	75	45.266	Amphiprion_ocellaris
WBGene00021365	smgl-2	86	41.992	ENSAPEG00000013725	dhx34	75	45.381	Amphiprion_percula
WBGene00021365	smgl-2	85	41.484	ENSATEG00000009105	dhx34	74	44.653	Anabas_testudineus
WBGene00021365	smgl-2	79	42.442	ENSACAG00000004112	DHX34	80	42.098	Anolis_carolinensis
WBGene00021365	smgl-2	82	41.831	ENSANAG00000038287	DHX34	72	45.018	Aotus_nancymaae
WBGene00021365	smgl-2	82	43.583	ENSACLG00000021819	dhx34	72	46.739	Astatotilapia_calliptera
WBGene00021365	smgl-2	86	41.238	ENSAMXG00000019705	dhx34	75	44.343	Astyanax_mexicanus
WBGene00021365	smgl-2	83	41.423	ENSBTAG00000006848	DHX34	78	44.340	Bos_taurus
WBGene00021365	smgl-2	82	42.535	ENSCJAG00000011504	DHX34	71	45.498	Callithrix_jacchus
WBGene00021365	smgl-2	83	42.598	ENSCAFG00000004170	DHX34	74	44.755	Canis_familiaris
WBGene00021365	smgl-2	82	42.595	ENSCAFG00020001163	DHX34	73	44.771	Canis_lupus_dingo
WBGene00021365	smgl-2	83	41.841	ENSCHIG00000024526	DHX34	72	44.881	Capra_hircus
WBGene00021365	smgl-2	75	44.462	ENSTSYG00000031168	DHX34	68	46.895	Carlito_syrichta
WBGene00021365	smgl-2	78	42.669	ENSCAPG00000014599	DHX34	75	44.189	Cavia_aperea
WBGene00021365	smgl-2	78	43.363	ENSCPOG00000006510	DHX34	75	44.393	Cavia_porcellus
WBGene00021365	smgl-2	82	42.113	ENSCCAG00000028675	DHX34	72	45.258	Cebus_capucinus
WBGene00021365	smgl-2	83	40.828	ENSCATG00000032316	DHX34	72	42.584	Cercocebus_atys
WBGene00021365	smgl-2	82	42.254	ENSCLAG00000000906	DHX34	72	45.238	Chinchilla_lanigera
WBGene00021365	smgl-2	83	39.474	ENSCSAG00000002965	DHX34	72	42.686	Chlorocebus_sabaeus
WBGene00021365	smgl-2	86	41.247	ENSCING00000004681	-	86	42.887	Ciona_intestinalis
WBGene00021365	smgl-2	83	42.047	ENSCSAVG00000009685	-	81	65.072	Ciona_savignyi
WBGene00021365	smgl-2	83	42.142	ENSCANG00000037215	DHX34	72	45.324	Colobus_angolensis_palliatus
WBGene00021365	smgl-2	84	42.019	ENSCSEG00000007100	dhx34	73	45.210	Cynoglossus_semilaevis
WBGene00021365	smgl-2	82	42.716	ENSCVAG00000002423	dhx34	72	46.265	Cyprinodon_variegatus
WBGene00021365	smgl-2	86	41.255	ENSDARG00000061168	dhx34	75	44.381	Danio_rerio
WBGene00021365	smgl-2	61	48.588	ENSDNOG00000031738	DHX34	57	48.588	Dasypus_novemcinctus
WBGene00021365	smgl-2	82	41.620	ENSDORG00000008437	Dhx34	72	44.815	Dipodomys_ordii
WBGene00021365	smgl-2	81	40.453	FBgn0052533	CG32533	73	42.975	Drosophila_melanogaster
WBGene00021365	smgl-2	86	40.431	ENSEBUG00000014272	dhx34	78	43.103	Eptatretus_burgeri
WBGene00021365	smgl-2	80	43.634	ENSEASG00005004155	DHX34	72	45.962	Equus_asinus_asinus
WBGene00021365	smgl-2	80	43.634	ENSECAG00000011354	DHX34	69	57.143	Equus_caballus
WBGene00021365	smgl-2	78	43.548	ENSELUG00000021992	dhx34	72	46.926	Esox_lucius
WBGene00021365	smgl-2	82	42.232	ENSFCAG00000006144	DHX34	72	44.591	Felis_catus
WBGene00021365	smgl-2	51	50.811	ENSFDAG00000014928	DHX34	55	50.811	Fukomys_damarensis
WBGene00021365	smgl-2	86	41.263	ENSFHEG00000000517	dhx34	76	44.983	Fundulus_heteroclitus
WBGene00021365	smgl-2	82	43.162	ENSGMOG00000013400	dhx34	82	43.056	Gadus_morhua
WBGene00021365	smgl-2	83	41.562	ENSGACG00000013085	dhx34	74	64.500	Gasterosteus_aculeatus
WBGene00021365	smgl-2	56	51.792	ENSGAGG00000008776	DHX34	74	51.792	Gopherus_agassizii
WBGene00021365	smgl-2	82	40.196	ENSGGOG00000010037	DHX34	72	43.608	Gorilla_gorilla
WBGene00021365	smgl-2	82	43.583	ENSHBUG00000009820	dhx34	72	46.739	Haplochromis_burtoni
WBGene00021365	smgl-2	78	44.018	ENSHGLG00000004917	DHX34	72	45.913	Heterocephalus_glaber_female
WBGene00021365	smgl-2	78	44.165	ENSHGLG00100017146	DHX34	72	46.034	Heterocephalus_glaber_male
WBGene00021365	smgl-2	83	41.597	ENSHCOG00000017578	dhx34	73	45.042	Hippocampus_comes
WBGene00021365	smgl-2	82	43.239	ENSIPUG00000000655	Dhx34	72	45.793	Ictalurus_punctatus
WBGene00021365	smgl-2	83	41.783	ENSSTOG00000015831	DHX34	72	44.893	Ictidomys_tridecemlineatus
WBGene00021365	smgl-2	51	47.826	ENSKMAG00000005402	dhx34	75	49.465	Kryptolebias_marmoratus
WBGene00021365	smgl-2	86	37.517	ENSLBEG00000018430	dhx34	72	41.472	Labrus_bergylta
WBGene00021365	smgl-2	82	40.986	ENSLACG00000014421	DHX34	83	43.995	Latimeria_chalumnae
WBGene00021365	smgl-2	86	40.314	ENSLOCG00000014928	dhx34	74	44.318	Lepisosteus_oculatus
WBGene00021365	smgl-2	78	43.440	ENSLAFG00000003186	DHX34	70	46.163	Loxodonta_africana
WBGene00021365	smgl-2	82	42.797	ENSMFAG00000032991	DHX34	72	45.204	Macaca_fascicularis
WBGene00021365	smgl-2	82	42.797	ENSMMUG00000009275	DHX34	72	45.204	Macaca_mulatta
WBGene00021365	smgl-2	83	42.580	ENSMNEG00000038649	DHX34	72	45.072	Macaca_nemestrina
WBGene00021365	smgl-2	75	44.495	ENSMLEG00000041860	DHX34	81	46.831	Mandrillus_leucophaeus
WBGene00021365	smgl-2	83	43.077	ENSMAMG00000014106	dhx34	71	46.539	Mastacembelus_armatus
WBGene00021365	smgl-2	82	43.441	ENSMZEG00005024153	dhx34	72	46.618	Maylandia_zebra
WBGene00021365	smgl-2	81	43.101	ENSMAUG00000013394	Dhx34	72	45.683	Mesocricetus_auratus
WBGene00021365	smgl-2	78	42.984	ENSMICG00000011585	DHX34	72	45.018	Microcebus_murinus
WBGene00021365	smgl-2	82	42.757	ENSMOCG00000016843	Dhx34	76	44.257	Microtus_ochrogaster
WBGene00021365	smgl-2	86	41.622	ENSMMOG00000001357	dhx34	77	45.423	Mola_mola
WBGene00021365	smgl-2	82	41.726	ENSMODG00000008850	DHX34	72	44.819	Monodelphis_domestica
WBGene00021365	smgl-2	85	42.219	ENSMALG00000008883	dhx34	74	45.518	Monopterus_albus
WBGene00021365	smgl-2	86	41.216	MGP_CAROLIEiJ_G0029226	Dhx34	77	43.701	Mus_caroli
WBGene00021365	smgl-2	86	41.216	ENSMUSG00000006019	Dhx34	74	44.380	Mus_musculus
WBGene00021365	smgl-2	82	42.194	MGP_PahariEiJ_G0021082	Dhx34	72	45.204	Mus_pahari
WBGene00021365	smgl-2	86	41.081	MGP_SPRETEiJ_G0030305	Dhx34	74	44.264	Mus_spretus
WBGene00021365	smgl-2	82	41.443	ENSMPUG00000004925	DHX34	76	44.952	Mustela_putorius_furo
WBGene00021365	smgl-2	82	43.159	ENSMLUG00000013743	DHX34	73	45.647	Myotis_lucifugus
WBGene00021365	smgl-2	82	42.616	ENSNGAG00000012974	Dhx34	73	45.204	Nannospalax_galili
WBGene00021365	smgl-2	82	40.169	ENSNLEG00000003010	DHX34	72	43.217	Nomascus_leucogenys
WBGene00021365	smgl-2	60	59.391	ENSMEUG00000005067	DHX34	59	59.391	Notamacropus_eugenii
WBGene00021365	smgl-2	69	45.932	ENSOPRG00000011872	-	61	48.179	Ochotona_princeps
WBGene00021365	smgl-2	78	42.388	ENSODEG00000006333	DHX34	68	45.649	Octodon_degus
WBGene00021365	smgl-2	82	42.897	ENSONIG00000004067	dhx34	72	46.321	Oreochromis_niloticus
WBGene00021365	smgl-2	67	42.896	ENSOANG00000000569	-	81	42.313	Ornithorhynchus_anatinus
WBGene00021365	smgl-2	82	42.475	ENSOCUG00000014005	DHX34	72	45.324	Oryctolagus_cuniculus
WBGene00021365	smgl-2	89	40.774	ENSORLG00000002308	dhx34	77	44.209	Oryzias_latipes
WBGene00021365	smgl-2	89	40.903	ENSORLG00020017122	dhx34	76	44.321	Oryzias_latipes_hni
WBGene00021365	smgl-2	89	39.974	ENSORLG00015005813	dhx34	77	44.209	Oryzias_latipes_hsok
WBGene00021365	smgl-2	86	40.530	ENSOMEG00000001279	dhx34	83	42.782	Oryzias_melastigma
WBGene00021365	smgl-2	82	42.736	ENSOGAG00000002061	DHX34	73	45.112	Otolemur_garnettii
WBGene00021365	smgl-2	70	43.170	ENSOARG00000011049	DHX34	69	45.964	Ovis_aries
WBGene00021365	smgl-2	82	39.662	ENSPPAG00000029582	DHX34	72	43.165	Pan_paniscus
WBGene00021365	smgl-2	82	42.232	ENSPPRG00000002535	DHX34	72	44.471	Panthera_pardus
WBGene00021365	smgl-2	65	44.746	ENSPTIG00000018435	DHX34	71	36.429	Panthera_tigris_altaica
WBGene00021365	smgl-2	82	42.053	ENSPTRG00000011207	DHX34	72	45.204	Pan_troglodytes
WBGene00021365	smgl-2	82	42.797	ENSPANG00000011774	DHX34	72	45.204	Papio_anubis
WBGene00021365	smgl-2	86	41.074	ENSPKIG00000013394	dhx34	75	44.700	Paramormyrops_kingsleyae
WBGene00021365	smgl-2	82	42.105	ENSPMGG00000016033	dhx34	74	45.759	Periophthalmus_magnuspinnatus
WBGene00021365	smgl-2	83	42.420	ENSPEMG00000017613	Dhx34	76	44.635	Peromyscus_maniculatus_bairdii
WBGene00021365	smgl-2	83	41.210	ENSPMAG00000000368	dhx34	77	44.000	Petromyzon_marinus
WBGene00021365	smgl-2	73	51.034	ENSPCIG00000000889	DHX34	71	53.584	Phascolarctos_cinereus
WBGene00021365	smgl-2	86	42.725	ENSPFOG00000011417	dhx34	83	42.520	Poecilia_formosa
WBGene00021365	smgl-2	86	41.879	ENSPLAG00000021500	dhx34	75	45.161	Poecilia_latipinna
WBGene00021365	smgl-2	86	41.611	ENSPMEG00000008135	dhx34	75	44.931	Poecilia_mexicana
WBGene00021365	smgl-2	86	41.745	ENSPREG00000016403	dhx34	75	45.046	Poecilia_reticulata
WBGene00021365	smgl-2	83	42.281	ENSPPYG00000010172	DHX34	73	45.131	Pongo_abelii
WBGene00021365	smgl-2	58	51.664	ENSPCAG00000003843	DHX34	53	52.188	Procavia_capensis
WBGene00021365	smgl-2	82	42.496	ENSPCOG00000027801	DHX34	72	45.574	Propithecus_coquereli
WBGene00021365	smgl-2	83	43.115	ENSPVAG00000004017	DHX34	80	43.909	Pteropus_vampyrus
WBGene00021365	smgl-2	82	43.892	ENSPNYG00000007967	dhx34	72	47.023	Pundamilia_nyererei
WBGene00021365	smgl-2	86	41.489	ENSPNAG00000015028	dhx34	75	44.457	Pygocentrus_nattereri
WBGene00021365	smgl-2	82	42.637	ENSRNOG00000047575	Dhx34	74	45.324	Rattus_norvegicus
WBGene00021365	smgl-2	83	41.460	ENSRBIG00000037382	DHX34	72	44.641	Rhinopithecus_bieti
WBGene00021365	smgl-2	83	42.142	ENSRROG00000042872	DHX34	72	45.249	Rhinopithecus_roxellana
WBGene00021365	smgl-2	72	58.407	ENSSBOG00000026147	DHX34	69	58.188	Saimiri_boliviensis_boliviensis
WBGene00021365	smgl-2	86	41.176	ENSSFOG00015023082	dhx34	75	44.380	Scleropages_formosus
WBGene00021365	smgl-2	86	42.297	ENSSMAG00000000815	dhx34	75	45.771	Scophthalmus_maximus
WBGene00021365	smgl-2	86	42.091	ENSSDUG00000021018	dhx34	80	45.224	Seriola_dumerili
WBGene00021365	smgl-2	86	42.148	ENSSLDG00000005497	dhx34	75	45.276	Seriola_lalandi_dorsalis
WBGene00021365	smgl-2	52	52.389	ENSSPUG00000012308	DHX34	66	50.839	Sphenodon_punctatus
WBGene00021365	smgl-2	85	42.055	ENSSPAG00000023353	dhx34	75	45.721	Stegastes_partitus
WBGene00021365	smgl-2	78	43.575	ENSSSCG00000003114	DHX34	85	44.392	Sus_scrofa
WBGene00021365	smgl-2	82	40.788	ENSTRUG00000010539	dhx34	71	44.604	Takifugu_rubripes
WBGene00021365	smgl-2	82	41.749	ENSTNIG00000016288	dhx34	75	65.000	Tetraodon_nigroviridis
WBGene00021365	smgl-2	82	38.819	ENSTTRG00000002257	DHX34	73	42.000	Tursiops_truncatus
WBGene00021365	smgl-2	82	42.313	ENSUAMG00000020189	DHX34	73	44.771	Ursus_americanus
WBGene00021365	smgl-2	83	42.039	ENSVVUG00000023515	DHX34	74	44.639	Vulpes_vulpes
WBGene00021365	smgl-2	82	42.938	ENSXETG00000012176	dhx34	72	45.848	Xenopus_tropicalis
WBGene00021365	smgl-2	86	41.588	ENSXCOG00000009309	dhx34	76	45.035	Xiphophorus_couchianus
WBGene00021365	smgl-2	86	41.588	ENSXMAG00000007699	dhx34	75	45.035	Xiphophorus_maculatus