EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00021682 (Gene tree)
Gene ID: -
Gene Symbol: Y48G1C.9
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1498 bases
Position: chrI:91380-92877
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y48G1C	LSM	PF01423.22	9.9e-09	1	1
Y48G1C	LSM	PF01423.22	9.9e-09	1	1
Y48G1C	LSM	PF01423.22	9.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y48G1C.9.3	-	546	-	Y48G1C.9.3	103 (aa)	-	Q9BL76
Y48G1C.9.2	-	389	NM_058270	Y48G1C.9.2	103 (aa)	NP_490671	Q9BL76
Y48G1C.9.1	-	413	NM_058270	Y48G1C.9.1	103 (aa)	NP_490671	Q9BL76

Gene Model

Click here to download WBGene00021682's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021682	Y48G1C.9	76	30.000	ENSG00000183011	NAA38	79	36.207	Homo_sapiens
WBGene00021682	Y48G1C.9	80	36.905	ENSAPOG00000005647	naa38	75	36.905	Acanthochromis_polyacanthus
WBGene00021682	Y48G1C.9	59	38.095	ENSACIG00000019730	naa38	82	38.095	Amphilophus_citrinellus
WBGene00021682	Y48G1C.9	73	37.662	ENSAOCG00000023811	naa38	75	36.905	Amphiprion_ocellaris
WBGene00021682	Y48G1C.9	73	37.662	ENSAPEG00000006441	naa38	75	36.905	Amphiprion_percula
WBGene00021682	Y48G1C.9	76	38.750	ENSATEG00000001072	naa38	73	38.750	Anabas_testudineus
WBGene00021682	Y48G1C.9	68	33.333	ENSACAG00000004477	NAA38	59	33.333	Anolis_carolinensis
WBGene00021682	Y48G1C.9	73	35.065	ENSACLG00000009549	naa38	75	34.524	Astatotilapia_calliptera
WBGene00021682	Y48G1C.9	70	39.189	ENSAMXG00000037469	naa38	70	39.189	Astyanax_mexicanus
WBGene00021682	Y48G1C.9	75	30.380	ENSBTAG00000014695	NAA38	63	30.380	Bos_taurus
WBGene00021682	Y48G1C.9	75	30.380	ENSCHIG00000023618	NAA38	63	30.380	Capra_hircus
WBGene00021682	Y48G1C.9	76	30.000	ENSTSYG00000033326	NAA38	63	30.380	Carlito_syrichta
WBGene00021682	Y48G1C.9	76	31.250	ENSCPOG00000032412	NAA38	64	31.250	Cavia_porcellus
WBGene00021682	Y48G1C.9	75	31.765	ENSCATG00000032806	NAA38	80	30.380	Cercocebus_atys
WBGene00021682	Y48G1C.9	75	30.380	ENSCLAG00000015879	NAA38	63	30.380	Chinchilla_lanigera
WBGene00021682	Y48G1C.9	75	30.380	ENSCSAG00000011136	NAA38	63	30.380	Chlorocebus_sabaeus
WBGene00021682	Y48G1C.9	76	30.000	ENSCHOG00000009659	NAA38	65	30.000	Choloepus_hoffmanni
WBGene00021682	Y48G1C.9	75	31.765	ENSCANG00000038998	NAA38	80	30.380	Colobus_angolensis_palliatus
WBGene00021682	Y48G1C.9	81	36.471	ENSCSEG00000004480	naa38	83	36.471	Cynoglossus_semilaevis
WBGene00021682	Y48G1C.9	83	36.782	ENSCVAG00000007301	naa38	80	36.782	Cyprinodon_variegatus
WBGene00021682	Y48G1C.9	79	34.940	ENSDARG00000099122	naa38	76	34.940	Danio_rerio
WBGene00021682	Y48G1C.9	73	32.468	ENSDNOG00000040664	-	83	32.468	Dasypus_novemcinctus
WBGene00021682	Y48G1C.9	75	30.380	ENSDORG00000010169	Naa38	63	30.380	Dipodomys_ordii
WBGene00021682	Y48G1C.9	63	32.836	ENSEBUG00000002518	naa38	63	32.836	Eptatretus_burgeri
WBGene00021682	Y48G1C.9	75	30.864	ENSECAG00000037837	NAA38	64	30.864	Equus_caballus
WBGene00021682	Y48G1C.9	85	34.444	ENSELUG00000019427	naa38	78	34.444	Esox_lucius
WBGene00021682	Y48G1C.9	76	30.000	ENSFCAG00000026713	NAA38	80	30.380	Felis_catus
WBGene00021682	Y48G1C.9	76	31.250	ENSFDAG00000012656	NAA38	64	31.250	Fukomys_damarensis
WBGene00021682	Y48G1C.9	83	36.782	ENSFHEG00000017032	naa38	81	36.782	Fundulus_heteroclitus
WBGene00021682	Y48G1C.9	80	33.333	ENSGMOG00000013571	naa38	89	33.333	Gadus_morhua
WBGene00021682	Y48G1C.9	65	30.435	ENSGALG00000054037	-	70	30.435	Gallus_gallus
WBGene00021682	Y48G1C.9	65	30.435	ENSGALG00000052672	-	72	30.435	Gallus_gallus
WBGene00021682	Y48G1C.9	83	36.782	ENSGAFG00000004021	naa38	80	36.782	Gambusia_affinis
WBGene00021682	Y48G1C.9	83	35.632	ENSGACG00000019273	naa38	81	35.632	Gasterosteus_aculeatus
WBGene00021682	Y48G1C.9	75	31.765	ENSGGOG00000015317	-	80	30.380	Gorilla_gorilla
WBGene00021682	Y48G1C.9	73	35.065	ENSHBUG00000019918	naa38	75	34.524	Haplochromis_burtoni
WBGene00021682	Y48G1C.9	76	31.250	ENSHGLG00000014324	NAA38	64	31.250	Heterocephalus_glaber_female
WBGene00021682	Y48G1C.9	76	31.250	ENSHGLG00100013112	NAA38	64	31.250	Heterocephalus_glaber_male
WBGene00021682	Y48G1C.9	80	39.286	ENSHCOG00000010193	naa38	71	39.286	Hippocampus_comes
WBGene00021682	Y48G1C.9	77	33.333	ENSIPUG00000021657	naa38	79	33.333	Ictalurus_punctatus
WBGene00021682	Y48G1C.9	75	30.380	ENSSTOG00000025950	NAA38	63	30.380	Ictidomys_tridecemlineatus
WBGene00021682	Y48G1C.9	54	36.207	ENSJJAG00000013236	Naa38	79	36.207	Jaculus_jaculus
WBGene00021682	Y48G1C.9	77	37.037	ENSKMAG00000019461	naa38	67	36.047	Kryptolebias_marmoratus
WBGene00021682	Y48G1C.9	81	37.647	ENSLBEG00000028489	naa38	79	37.647	Labrus_bergylta
WBGene00021682	Y48G1C.9	65	34.783	ENSLACG00000007757	NAA38	66	34.783	Latimeria_chalumnae
WBGene00021682	Y48G1C.9	83	35.632	ENSLOCG00000013981	naa38	76	35.632	Lepisosteus_oculatus
WBGene00021682	Y48G1C.9	75	30.380	ENSLAFG00000009169	NAA38	63	30.380	Loxodonta_africana
WBGene00021682	Y48G1C.9	75	31.765	ENSMFAG00000037580	NAA38	80	30.380	Macaca_fascicularis
WBGene00021682	Y48G1C.9	75	30.380	ENSMMUG00000008178	NAA38	80	30.380	Macaca_mulatta
WBGene00021682	Y48G1C.9	75	31.765	ENSMNEG00000031597	NAA38	80	30.380	Macaca_nemestrina
WBGene00021682	Y48G1C.9	75	31.765	ENSMLEG00000037461	NAA38	80	30.380	Mandrillus_leucophaeus
WBGene00021682	Y48G1C.9	80	34.524	ENSMAMG00000000538	naa38	74	34.524	Mastacembelus_armatus
WBGene00021682	Y48G1C.9	73	35.065	ENSMZEG00005021265	naa38	75	34.524	Maylandia_zebra
WBGene00021682	Y48G1C.9	65	30.435	ENSMGAG00000017259	NAA38	85	30.435	Meleagris_gallopavo
WBGene00021682	Y48G1C.9	76	30.000	ENSMAUG00000020052	Naa38	64	30.000	Mesocricetus_auratus
WBGene00021682	Y48G1C.9	75	30.380	ENSMICG00000015147	NAA38	80	30.380	Microcebus_murinus
WBGene00021682	Y48G1C.9	76	30.000	ENSMOCG00000002129	Naa38	64	30.000	Microtus_ochrogaster
WBGene00021682	Y48G1C.9	73	37.662	ENSMMOG00000012705	naa38	68	37.662	Mola_mola
WBGene00021682	Y48G1C.9	60	34.375	ENSMODG00000007434	NAA38	63	30.380	Monodelphis_domestica
WBGene00021682	Y48G1C.9	73	35.065	ENSMALG00000001438	naa38	69	35.065	Monopterus_albus
WBGene00021682	Y48G1C.9	76	30.000	MGP_CAROLIEiJ_G0016568	Naa38	64	30.000	Mus_caroli
WBGene00021682	Y48G1C.9	76	30.000	ENSMUSG00000059278	Naa38	64	30.000	Mus_musculus
WBGene00021682	Y48G1C.9	76	30.000	MGP_PahariEiJ_G0017699	Naa38	64	30.000	Mus_pahari
WBGene00021682	Y48G1C.9	76	30.000	MGP_SPRETEiJ_G0017404	Naa38	64	30.000	Mus_spretus
WBGene00021682	Y48G1C.9	75	30.380	ENSMPUG00000008886	NAA38	63	30.380	Mustela_putorius_furo
WBGene00021682	Y48G1C.9	75	30.380	ENSNGAG00000019042	Naa38	63	30.380	Nannospalax_galili
WBGene00021682	Y48G1C.9	73	35.065	ENSNBRG00000000619	naa38	75	34.524	Neolamprologus_brichardi
WBGene00021682	Y48G1C.9	75	31.818	ENSNLEG00000027601	NAA38	80	30.380	Nomascus_leucogenys
WBGene00021682	Y48G1C.9	76	31.250	ENSODEG00000017702	NAA38	64	31.250	Octodon_degus
WBGene00021682	Y48G1C.9	73	35.065	ENSONIG00000009306	naa38	75	34.524	Oreochromis_niloticus
WBGene00021682	Y48G1C.9	76	30.000	ENSOCUG00000017284	NAA38	63	30.380	Oryctolagus_cuniculus
WBGene00021682	Y48G1C.9	75	37.500	ENSORLG00000007119	naa38	59	37.500	Oryzias_latipes
WBGene00021682	Y48G1C.9	77	36.585	ENSORLG00020008335	naa38	60	36.585	Oryzias_latipes_hni
WBGene00021682	Y48G1C.9	83	36.364	ENSORLG00015005138	naa38	78	36.364	Oryzias_latipes_hsok
WBGene00021682	Y48G1C.9	83	36.364	ENSOMEG00000013718	naa38	78	36.364	Oryzias_melastigma
WBGene00021682	Y48G1C.9	75	31.765	ENSPPAG00000026097	NAA38	80	30.380	Pan_paniscus
WBGene00021682	Y48G1C.9	75	30.380	ENSPTRG00000008712	NAA38	80	30.380	Pan_troglodytes
WBGene00021682	Y48G1C.9	75	31.765	ENSPANG00000023935	NAA38	80	30.380	Papio_anubis
WBGene00021682	Y48G1C.9	83	36.364	ENSPMGG00000008216	naa38	79	36.364	Periophthalmus_magnuspinnatus
WBGene00021682	Y48G1C.9	76	30.000	ENSPEMG00000015014	Naa38	64	30.000	Peromyscus_maniculatus_bairdii
WBGene00021682	Y48G1C.9	61	33.846	ENSPMAG00000006001	naa38	65	33.846	Petromyzon_marinus
WBGene00021682	Y48G1C.9	83	36.782	ENSPFOG00000012670	naa38	80	36.782	Poecilia_formosa
WBGene00021682	Y48G1C.9	83	36.782	ENSPLAG00000002707	naa38	80	36.782	Poecilia_latipinna
WBGene00021682	Y48G1C.9	83	36.782	ENSPMEG00000016652	naa38	84	36.782	Poecilia_mexicana
WBGene00021682	Y48G1C.9	81	36.471	ENSPREG00000011017	naa38	57	36.471	Poecilia_reticulata
WBGene00021682	Y48G1C.9	75	30.380	ENSPCOG00000020844	NAA38	80	30.380	Propithecus_coquereli
WBGene00021682	Y48G1C.9	73	35.065	ENSPNYG00000021415	naa38	75	34.524	Pundamilia_nyererei
WBGene00021682	Y48G1C.9	78	36.585	ENSPNAG00000020828	naa38	80	36.585	Pygocentrus_nattereri
WBGene00021682	Y48G1C.9	76	30.000	ENSRNOG00000009823	Naa38	64	30.000	Rattus_norvegicus
WBGene00021682	Y48G1C.9	76	30.000	ENSRBIG00000039054	NAA38	80	30.380	Rhinopithecus_bieti
WBGene00021682	Y48G1C.9	76	30.000	ENSRROG00000037370	NAA38	80	30.380	Rhinopithecus_roxellana
WBGene00021682	Y48G1C.9	70	39.189	ENSSFOG00015023111	naa38	67	39.189	Scleropages_formosus
WBGene00021682	Y48G1C.9	62	40.909	ENSSMAG00000006429	naa38	86	40.909	Scophthalmus_maximus
WBGene00021682	Y48G1C.9	80	36.905	ENSSDUG00000005842	naa38	75	36.905	Seriola_dumerili
WBGene00021682	Y48G1C.9	80	36.905	ENSSLDG00000003013	naa38	75	36.905	Seriola_lalandi_dorsalis
WBGene00021682	Y48G1C.9	68	33.333	ENSSPUG00000014761	NAA38	73	33.333	Sphenodon_punctatus
WBGene00021682	Y48G1C.9	76	37.500	ENSSPAG00000013671	naa38	78	36.782	Stegastes_partitus
WBGene00021682	Y48G1C.9	75	30.380	ENSSSCG00000017971	NAA38	63	30.380	Sus_scrofa
WBGene00021682	Y48G1C.9	77	37.037	ENSTRUG00000021566	naa38	72	37.037	Takifugu_rubripes
WBGene00021682	Y48G1C.9	62	40.909	ENSTNIG00000012999	naa38	90	40.909	Tetraodon_nigroviridis
WBGene00021682	Y48G1C.9	75	30.380	ENSUAMG00000005463	NAA38	63	30.380	Ursus_americanus
WBGene00021682	Y48G1C.9	75	30.380	ENSVVUG00000028004	NAA38	63	30.380	Vulpes_vulpes
WBGene00021682	Y48G1C.9	66	31.429	ENSXETG00000015633	naa38	59	31.429	Xenopus_tropicalis
WBGene00021682	Y48G1C.9	85	36.667	ENSXCOG00000000768	naa38	75	36.667	Xiphophorus_couchianus
WBGene00021682	Y48G1C.9	85	36.667	ENSXMAG00000028369	naa38	80	36.782	Xiphophorus_maculatus