EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00021686 (Gene tree)
Gene ID: -
Gene Symbol: Y48G8AL.5
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 18277 bases
Position: chrI:1193158-1211434
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y48G8AL	Methyltr_RsmB-F	PF01189.17	2.2e-38	1	1
Y48G8AL	Methyltr_RsmB-F	PF01189.17	7.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y48G8AL.5d	-	657	NM_001306295	Y48G8AL.5d	182 (aa)	NP_001293224	V6CJ77
Y48G8AL.5b	-	1455	NM_001306293	Y48G8AL.5b	484 (aa)	NP_001293222	V6CLP2
Y48G8AL.5c	-	861	NM_001306294	Y48G8AL.5c	286 (aa)	NP_001293223	V6CLJ9
Y48G8AL.5a	-	2524	NM_058429	Y48G8AL.5a	684 (aa)	NP_490830	Q9BL15

Gene Model

Click here to download WBGene00021686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021686's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021686	Y48G8AL.5	97	33.094	ENSG00000037474	NSUN2	89	36.298	Homo_sapiens
WBGene00021686	Y48G8AL.5	89	44.988	ENSAPOG00000000894	nsun2	79	44.988	Acanthochromis_polyacanthus
WBGene00021686	Y48G8AL.5	94	46.725	ENSAMEG00000002744	NSUN2	78	45.771	Ailuropoda_melanoleuca
WBGene00021686	Y48G8AL.5	85	44.755	ENSACIG00000013142	nsun2	79	44.755	Amphilophus_citrinellus
WBGene00021686	Y48G8AL.5	89	48.649	ENSAOCG00000019227	nsun2	81	46.305	Amphiprion_ocellaris
WBGene00021686	Y48G8AL.5	89	48.649	ENSAPEG00000002772	nsun2	81	46.305	Amphiprion_percula
WBGene00021686	Y48G8AL.5	91	34.680	ENSATEG00000006961	nsun2	94	34.008	Anabas_testudineus
WBGene00021686	Y48G8AL.5	87	36.217	ENSAPLG00000011518	NSUN2	88	38.028	Anas_platyrhynchos
WBGene00021686	Y48G8AL.5	92	34.113	ENSACAG00000000677	NSUN2	83	36.245	Anolis_carolinensis
WBGene00021686	Y48G8AL.5	98	46.725	ENSANAG00000034451	NSUN2	90	46.757	Aotus_nancymaae
WBGene00021686	Y48G8AL.5	89	46.847	ENSACLG00000014258	nsun2	94	35.085	Astatotilapia_calliptera
WBGene00021686	Y48G8AL.5	97	33.517	ENSAMXG00000017682	nsun2	92	35.983	Astyanax_mexicanus
WBGene00021686	Y48G8AL.5	95	46.725	ENSBTAG00000015466	NSUN2	84	45.771	Bos_taurus
WBGene00021686	Y48G8AL.5	97	32.916	ENSCJAG00000008689	NSUN2	62	37.072	Callithrix_jacchus
WBGene00021686	Y48G8AL.5	94	47.598	ENSCAFG00000010334	NSUN2	79	46.020	Canis_familiaris
WBGene00021686	Y48G8AL.5	94	47.598	ENSCAFG00020022862	NSUN2	82	47.170	Canis_lupus_dingo
WBGene00021686	Y48G8AL.5	98	47.598	ENSCHIG00000019385	NSUN2	88	45.985	Capra_hircus
WBGene00021686	Y48G8AL.5	99	47.162	ENSTSYG00000005709	NSUN2	79	45.771	Carlito_syrichta
WBGene00021686	Y48G8AL.5	99	33.512	ENSCAPG00000013519	NSUN2	93	37.781	Cavia_aperea
WBGene00021686	Y48G8AL.5	99	33.630	ENSCPOG00000008196	NSUN2	90	35.489	Cavia_porcellus
WBGene00021686	Y48G8AL.5	57	43.035	ENSCCAG00000034245	-	63	43.035	Cebus_capucinus
WBGene00021686	Y48G8AL.5	96	46.725	ENSCCAG00000025648	-	81	45.771	Cebus_capucinus
WBGene00021686	Y48G8AL.5	97	32.914	ENSCATG00000045020	-	91	35.665	Cercocebus_atys
WBGene00021686	Y48G8AL.5	97	32.844	ENSCATG00000042165	-	93	35.794	Cercocebus_atys
WBGene00021686	Y48G8AL.5	98	33.810	ENSCLAG00000003188	NSUN2	94	37.143	Chinchilla_lanigera
WBGene00021686	Y48G8AL.5	96	47.598	ENSCSAG00000017339	NSUN2	81	46.020	Chlorocebus_sabaeus
WBGene00021686	Y48G8AL.5	50	48.718	ENSCHOG00000003644	NSUN2	61	48.718	Choloepus_hoffmanni
WBGene00021686	Y48G8AL.5	90	34.766	ENSCPBG00000006615	NSUN2	89	36.183	Chrysemys_picta_bellii
WBGene00021686	Y48G8AL.5	86	38.015	ENSCING00000009504	-	99	38.015	Ciona_intestinalis
WBGene00021686	Y48G8AL.5	88	38.794	ENSCSAVG00000001710	-	99	40.128	Ciona_savignyi
WBGene00021686	Y48G8AL.5	97	32.914	ENSCANG00000029527	NSUN2	92	36.131	Colobus_angolensis_palliatus
WBGene00021686	Y48G8AL.5	97	32.601	ENSCGRG00001003947	Nsun2	91	35.971	Cricetulus_griseus_chok1gshd
WBGene00021686	Y48G8AL.5	97	32.784	ENSCGRG00000005703	Nsun2	94	36.259	Cricetulus_griseus_crigri
WBGene00021686	Y48G8AL.5	90	33.199	ENSCVAG00000021836	nsun2	95	35.194	Cyprinodon_variegatus
WBGene00021686	Y48G8AL.5	97	32.671	ENSDARG00000056665	nsun2	91	35.559	Danio_rerio
WBGene00021686	Y48G8AL.5	96	34.444	ENSDNOG00000013848	NSUN2	95	37.065	Dasypus_novemcinctus
WBGene00021686	Y48G8AL.5	97	48.035	ENSDORG00000010247	Nsun2	95	47.439	Dipodomys_ordii
WBGene00021686	Y48G8AL.5	98	33.333	FBgn0026079	Nsun2	91	33.624	Drosophila_melanogaster
WBGene00021686	Y48G8AL.5	86	32.412	ENSETEG00000000983	NSUN2	88	32.412	Echinops_telfairi
WBGene00021686	Y48G8AL.5	92	31.010	ENSEBUG00000006751	nsun2	88	31.010	Eptatretus_burgeri
WBGene00021686	Y48G8AL.5	97	34.058	ENSEASG00005018580	NSUN2	90	36.155	Equus_asinus_asinus
WBGene00021686	Y48G8AL.5	97	33.152	ENSECAG00000016357	NSUN2	90	36.155	Equus_caballus
WBGene00021686	Y48G8AL.5	84	33.333	ENSEEUG00000001691	NSUN2	99	33.333	Erinaceus_europaeus
WBGene00021686	Y48G8AL.5	85	50.224	ENSELUG00000024082	nsun2	80	45.581	Esox_lucius
WBGene00021686	Y48G8AL.5	97	34.672	ENSFCAG00000015602	NSUN2	94	36.746	Felis_catus
WBGene00021686	Y48G8AL.5	87	48.472	ENSFALG00000007188	NSUN2	80	46.650	Ficedula_albicollis
WBGene00021686	Y48G8AL.5	86	47.598	ENSFDAG00000003589	NSUN2	94	37.293	Fukomys_damarensis
WBGene00021686	Y48G8AL.5	89	45.455	ENSFHEG00000017930	nsun2	95	35.637	Fundulus_heteroclitus
WBGene00021686	Y48G8AL.5	87	36.323	ENSGMOG00000008921	nsun2	98	37.136	Gadus_morhua
WBGene00021686	Y48G8AL.5	91	36.117	ENSGALG00000013064	NSUN2	85	38.081	Gallus_gallus
WBGene00021686	Y48G8AL.5	88	36.127	ENSGAFG00000018743	nsun2	94	35.933	Gambusia_affinis
WBGene00021686	Y48G8AL.5	86	48.649	ENSGACG00000008974	nsun2	99	35.759	Gasterosteus_aculeatus
WBGene00021686	Y48G8AL.5	90	36.475	ENSGAGG00000015773	NSUN2	92	37.973	Gopherus_agassizii
WBGene00021686	Y48G8AL.5	97	33.094	ENSGGOG00000016583	NSUN2	89	36.298	Gorilla_gorilla
WBGene00021686	Y48G8AL.5	89	46.847	ENSHBUG00000022199	nsun2	94	33.901	Haplochromis_burtoni
WBGene00021686	Y48G8AL.5	92	33.779	ENSHGLG00000013825	NSUN2	91	36.155	Heterocephalus_glaber_female
WBGene00021686	Y48G8AL.5	86	36.337	ENSHGLG00100013746	NSUN2	99	36.337	Heterocephalus_glaber_male
WBGene00021686	Y48G8AL.5	85	50.673	ENSHCOG00000020484	nsun2	81	46.047	Hippocampus_comes
WBGene00021686	Y48G8AL.5	88	35.947	ENSIPUG00000014849	nsun2	91	35.908	Ictalurus_punctatus
WBGene00021686	Y48G8AL.5	95	50.218	ENSSTOG00000004090	NSUN2	81	47.512	Ictidomys_tridecemlineatus
WBGene00021686	Y48G8AL.5	97	48.472	ENSJJAG00000013996	Nsun2	87	46.517	Jaculus_jaculus
WBGene00021686	Y48G8AL.5	89	49.550	ENSKMAG00000000810	nsun2	84	45.455	Kryptolebias_marmoratus
WBGene00021686	Y48G8AL.5	92	45.921	ENSLBEG00000025697	nsun2	83	45.921	Labrus_bergylta
WBGene00021686	Y48G8AL.5	91	35.786	ENSLOCG00000008755	nsun2	90	35.786	Lepisosteus_oculatus
WBGene00021686	Y48G8AL.5	86	46.725	ENSLAFG00000009411	NSUN2	86	45.771	Loxodonta_africana
WBGene00021686	Y48G8AL.5	97	33.094	ENSMFAG00000045240	NSUN2	91	35.802	Macaca_fascicularis
WBGene00021686	Y48G8AL.5	97	33.094	ENSMMUG00000002561	NSUN2	91	35.802	Macaca_mulatta
WBGene00021686	Y48G8AL.5	97	33.094	ENSMNEG00000033485	NSUN2	91	35.802	Macaca_nemestrina
WBGene00021686	Y48G8AL.5	97	33.094	ENSMLEG00000017173	NSUN2	94	35.940	Mandrillus_leucophaeus
WBGene00021686	Y48G8AL.5	87	48.198	ENSMAMG00000004850	nsun2	83	44.056	Mastacembelus_armatus
WBGene00021686	Y48G8AL.5	89	46.847	ENSMZEG00005000101	nsun2	83	43.823	Maylandia_zebra
WBGene00021686	Y48G8AL.5	89	38.116	ENSMGAG00000006349	NSUN2	89	38.116	Meleagris_gallopavo
WBGene00021686	Y48G8AL.5	94	49.550	ENSMAUG00000014207	Nsun2	79	47.342	Mesocricetus_auratus
WBGene00021686	Y48G8AL.5	95	48.035	ENSMICG00000016549	NSUN2	75	46.517	Microcebus_murinus
WBGene00021686	Y48G8AL.5	99	35.809	ENSMOCG00000009613	Nsun2	97	35.809	Microtus_ochrogaster
WBGene00021686	Y48G8AL.5	96	33.512	ENSMMOG00000021188	nsun2	95	33.607	Mola_mola
WBGene00021686	Y48G8AL.5	92	48.908	ENSMODG00000002039	NSUN2	85	44.218	Monodelphis_domestica
WBGene00021686	Y48G8AL.5	91	49.099	ENSMALG00000002740	nsun2	84	44.522	Monopterus_albus
WBGene00021686	Y48G8AL.5	97	34.066	MGP_CAROLIEiJ_G0018690	Nsun2	90	36.925	Mus_caroli
WBGene00021686	Y48G8AL.5	97	34.066	ENSMUSG00000021595	Nsun2	95	37.048	Mus_musculus
WBGene00021686	Y48G8AL.5	93	36.300	MGP_PahariEiJ_G0015771	Nsun2	94	36.898	Mus_pahari
WBGene00021686	Y48G8AL.5	97	33.883	MGP_SPRETEiJ_G0019574	Nsun2	95	36.898	Mus_spretus
WBGene00021686	Y48G8AL.5	96	48.035	ENSMPUG00000007561	NSUN2	91	36.842	Mustela_putorius_furo
WBGene00021686	Y48G8AL.5	98	34.159	ENSMLUG00000009609	NSUN2	88	44.755	Myotis_lucifugus
WBGene00021686	Y48G8AL.5	96	48.035	ENSNGAG00000007424	Nsun2	85	46.517	Nannospalax_galili
WBGene00021686	Y48G8AL.5	97	33.153	ENSNLEG00000011344	NSUN2	89	36.298	Nomascus_leucogenys
WBGene00021686	Y48G8AL.5	95	34.074	ENSOPRG00000011324	NSUN2	96	37.340	Ochotona_princeps
WBGene00021686	Y48G8AL.5	92	47.162	ENSODEG00000018305	NSUN2	87	43.970	Octodon_degus
WBGene00021686	Y48G8AL.5	89	47.297	ENSONIG00000007761	nsun2	94	34.110	Oreochromis_niloticus
WBGene00021686	Y48G8AL.5	99	48.035	ENSOANG00000009243	NSUN2	79	47.297	Ornithorhynchus_anatinus
WBGene00021686	Y48G8AL.5	95	49.107	ENSOCUG00000007918	NSUN2	83	49.422	Oryctolagus_cuniculus
WBGene00021686	Y48G8AL.5	98	33.073	ENSORLG00000014332	nsun2	94	34.530	Oryzias_latipes
WBGene00021686	Y48G8AL.5	96	49.099	ENSORLG00020019799	nsun2	84	44.630	Oryzias_latipes_hni
WBGene00021686	Y48G8AL.5	97	44.626	ENSORLG00015007992	nsun2	83	46.832	Oryzias_latipes_hsok
WBGene00021686	Y48G8AL.5	92	34.236	ENSOMEG00000013504	nsun2	94	35.983	Oryzias_melastigma
WBGene00021686	Y48G8AL.5	97	33.748	ENSOGAG00000015015	NSUN2	88	36.910	Otolemur_garnettii
WBGene00021686	Y48G8AL.5	98	47.598	ENSOARG00000015042	NSUN2	79	46.269	Ovis_aries
WBGene00021686	Y48G8AL.5	97	33.094	ENSPPAG00000036124	NSUN2	89	36.298	Pan_paniscus
WBGene00021686	Y48G8AL.5	97	34.973	ENSPPRG00000001946	NSUN2	94	36.835	Panthera_pardus
WBGene00021686	Y48G8AL.5	97	33.396	ENSPTIG00000013257	NSUN2	97	35.601	Panthera_tigris_altaica
WBGene00021686	Y48G8AL.5	97	32.914	ENSPTRG00000016715	NSUN2	89	36.155	Pan_troglodytes
WBGene00021686	Y48G8AL.5	99	33.633	ENSPANG00000004215	NSUN2	91	35.940	Papio_anubis
WBGene00021686	Y48G8AL.5	95	37.356	ENSPKIG00000024200	nsun2	91	38.311	Paramormyrops_kingsleyae
WBGene00021686	Y48G8AL.5	90	35.088	ENSPSIG00000015282	NSUN2	87	37.165	Pelodiscus_sinensis
WBGene00021686	Y48G8AL.5	88	33.675	ENSPMGG00000004138	nsun2	91	33.675	Periophthalmus_magnuspinnatus
WBGene00021686	Y48G8AL.5	85	49.099	ENSPEMG00000021790	Nsun2	79	46.835	Peromyscus_maniculatus_bairdii
WBGene00021686	Y48G8AL.5	91	48.035	ENSPCIG00000011853	NSUN2	99	33.291	Phascolarctos_cinereus
WBGene00021686	Y48G8AL.5	88	36.272	ENSPFOG00000004139	nsun2	94	35.664	Poecilia_formosa
WBGene00021686	Y48G8AL.5	88	36.416	ENSPLAG00000007091	nsun2	95	35.479	Poecilia_latipinna
WBGene00021686	Y48G8AL.5	88	36.416	ENSPMEG00000000122	nsun2	94	36.084	Poecilia_mexicana
WBGene00021686	Y48G8AL.5	88	37.118	ENSPREG00000017479	nsun2	94	35.983	Poecilia_reticulata
WBGene00021686	Y48G8AL.5	97	32.914	ENSPPYG00000015332	NSUN2	90	35.745	Pongo_abelii
WBGene00021686	Y48G8AL.5	92	48.472	ENSPCOG00000012979	NSUN2	80	42.750	Propithecus_coquereli
WBGene00021686	Y48G8AL.5	93	48.276	ENSPVAG00000010643	NSUN2	81	46.173	Pteropus_vampyrus
WBGene00021686	Y48G8AL.5	89	46.847	ENSPNYG00000010677	nsun2	94	35.035	Pundamilia_nyererei
WBGene00021686	Y48G8AL.5	97	32.448	ENSPNAG00000006827	nsun2	90	32.979	Pygocentrus_nattereri
WBGene00021686	Y48G8AL.5	97	33.333	ENSRNOG00000017254	Nsun2	85	37.147	Rattus_norvegicus
WBGene00021686	Y48G8AL.5	97	32.914	ENSRBIG00000035794	NSUN2	89	36.155	Rhinopithecus_bieti
WBGene00021686	Y48G8AL.5	97	32.914	ENSRROG00000035277	NSUN2	89	36.155	Rhinopithecus_roxellana
WBGene00021686	Y48G8AL.5	90	34.087	YBL024W	NCL1	99	33.380	Saccharomyces_cerevisiae
WBGene00021686	Y48G8AL.5	92	45.522	ENSSBOG00000035262	NSUN2	85	45.522	Saimiri_boliviensis_boliviensis
WBGene00021686	Y48G8AL.5	89	48.261	ENSSHAG00000011056	NSUN2	89	44.622	Sarcophilus_harrisii
WBGene00021686	Y48G8AL.5	87	50.000	ENSSFOG00015001631	nsun2	79	46.782	Scleropages_formosus
WBGene00021686	Y48G8AL.5	85	49.099	ENSSMAG00000020669	nsun2	84	44.522	Scophthalmus_maximus
WBGene00021686	Y48G8AL.5	91	44.755	ENSSDUG00000002080	nsun2	94	34.558	Seriola_dumerili
WBGene00021686	Y48G8AL.5	85	49.550	ENSSLDG00000004496	nsun2	84	45.221	Seriola_lalandi_dorsalis
WBGene00021686	Y48G8AL.5	100	34.783	ENSSPUG00000008865	NSUN2	95	35.762	Sphenodon_punctatus
WBGene00021686	Y48G8AL.5	87	49.776	ENSSPAG00000003665	nsun2	81	47.174	Stegastes_partitus
WBGene00021686	Y48G8AL.5	98	33.800	ENSSSCG00000017104	NSUN2	86	37.446	Sus_scrofa
WBGene00021686	Y48G8AL.5	90	48.472	ENSTGUG00000007789	NSUN2	92	46.734	Taeniopygia_guttata
WBGene00021686	Y48G8AL.5	88	47.748	ENSTRUG00000011788	nsun2	84	44.651	Takifugu_rubripes
WBGene00021686	Y48G8AL.5	91	47.297	ENSTNIG00000009258	nsun2	91	43.823	Tetraodon_nigroviridis
WBGene00021686	Y48G8AL.5	81	48.472	ENSTBEG00000014695	NSUN2	74	46.420	Tupaia_belangeri
WBGene00021686	Y48G8AL.5	96	39.738	ENSTTRG00000012662	NSUN2	81	41.542	Tursiops_truncatus
WBGene00021686	Y48G8AL.5	94	47.162	ENSUAMG00000024741	NSUN2	85	40.796	Ursus_americanus
WBGene00021686	Y48G8AL.5	94	47.162	ENSUMAG00000021149	NSUN2	81	47.027	Ursus_maritimus
WBGene00021686	Y48G8AL.5	95	47.598	ENSVVUG00000017691	NSUN2	86	47.170	Vulpes_vulpes
WBGene00021686	Y48G8AL.5	86	37.092	ENSXETG00000001732	nsun2	84	37.092	Xenopus_tropicalis
WBGene00021686	Y48G8AL.5	88	36.988	ENSXCOG00000002584	nsun2	94	36.492	Xiphophorus_couchianus
WBGene00021686	Y48G8AL.5	88	36.127	ENSXMAG00000013597	nsun2	94	35.664	Xiphophorus_maculatus