EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00021829 (Gene tree)
Gene ID: -
Gene Symbol: mrpl-17
Alias: -
Full Name: Mitochondrial Ribosomal Protein%2C Large
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 847 bases
Position: chrI:3162803-3163649
Accession: Q9N3F3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y54E10A	Ribosomal_L17	PF01196.19	4.1e-08	1	1
Y54E10A	Ribosomal_L17	PF01196.19	4.1e-08	1	1
Y54E10A	Ribosomal_L17	PF01196.19	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y54E10A.7.1	-	670	NM_058713	Y54E10A.7.1	194 (aa)	NP_491114	Q9N3F3
Y54E10A.7.3	-	724	NM_058713	Y54E10A.7.3	194 (aa)	NP_491114	Q9N3F3
Y54E10A.7.2	-	660	NM_058713	Y54E10A.7.2	194 (aa)	NP_491114	Q9N3F3

Gene Model

Click here to download WBGene00021829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021829	mrpl-17	89	31.792	ENSG00000158042	MRPL17	90	31.792	Homo_sapiens
WBGene00021829	mrpl-17	75	34.483	ENSAPOG00000014937	mrpl17	80	34.483	Acanthochromis_polyacanthus
WBGene00021829	mrpl-17	81	31.210	ENSAMEG00000016246	MRPL17	88	31.818	Ailuropoda_melanoleuca
WBGene00021829	mrpl-17	75	34.483	ENSACIG00000011247	mrpl17	80	34.483	Amphilophus_citrinellus
WBGene00021829	mrpl-17	82	32.500	ENSAOCG00000009243	mrpl17	89	32.500	Amphiprion_ocellaris
WBGene00021829	mrpl-17	82	32.500	ENSAPEG00000009301	mrpl17	89	32.500	Amphiprion_percula
WBGene00021829	mrpl-17	92	30.726	ENSATEG00000018777	mrpl17	95	30.726	Anabas_testudineus
WBGene00021829	mrpl-17	83	36.646	ENSACAG00000009480	MRPL17	86	36.646	Anolis_carolinensis
WBGene00021829	mrpl-17	86	30.539	ENSANAG00000019957	MRPL17	87	30.539	Aotus_nancymaae
WBGene00021829	mrpl-17	84	33.951	ENSACLG00000027400	mrpl17	88	33.951	Astatotilapia_calliptera
WBGene00021829	mrpl-17	87	32.738	ENSAMXG00000015294	mrpl17	83	32.738	Astyanax_mexicanus
WBGene00021829	mrpl-17	75	33.103	ENSBTAG00000024781	MRPL17	77	33.103	Bos_taurus
WBGene00021829	mrpl-17	75	33.793	ENSCJAG00000038483	MRPL17	75	33.793	Callithrix_jacchus
WBGene00021829	mrpl-17	71	33.577	ENSCAFG00000006589	MRPL17	63	33.793	Canis_familiaris
WBGene00021829	mrpl-17	71	33.577	ENSCAFG00020009746	MRPL17	77	33.793	Canis_lupus_dingo
WBGene00021829	mrpl-17	81	31.210	ENSCHIG00000015842	MRPL17	88	31.250	Capra_hircus
WBGene00021829	mrpl-17	71	33.577	ENSTSYG00000027878	MRPL17	75	33.793	Carlito_syrichta
WBGene00021829	mrpl-17	86	31.737	ENSCPOG00000032658	MRPL17	88	31.737	Cavia_porcellus
WBGene00021829	mrpl-17	75	33.103	ENSCCAG00000025049	MRPL17	75	33.103	Cebus_capucinus
WBGene00021829	mrpl-17	75	33.793	ENSCATG00000035650	MRPL17	75	33.793	Cercocebus_atys
WBGene00021829	mrpl-17	65	33.858	ENSCLAG00000015854	MRPL17	80	32.258	Chinchilla_lanigera
WBGene00021829	mrpl-17	86	32.335	ENSCSAG00000004367	MRPL17	82	32.335	Chlorocebus_sabaeus
WBGene00021829	mrpl-17	75	39.310	ENSCPBG00000000499	MRPL17	74	39.310	Chrysemys_picta_bellii
WBGene00021829	mrpl-17	86	30.723	ENSCSAVG00000011072	-	93	30.723	Ciona_savignyi
WBGene00021829	mrpl-17	78	31.788	ENSCANG00000042315	MRPL17	83	31.875	Colobus_angolensis_palliatus
WBGene00021829	mrpl-17	82	32.704	ENSCGRG00000004658	Mrpl17	82	32.934	Cricetulus_griseus_crigri
WBGene00021829	mrpl-17	82	33.333	ENSCSEG00000015170	mrpl17	86	33.333	Cynoglossus_semilaevis
WBGene00021829	mrpl-17	81	33.544	ENSCVAG00000015116	mrpl17	86	33.544	Cyprinodon_variegatus
WBGene00021829	mrpl-17	77	34.667	ENSDARG00000075677	mrpl17	77	34.667	Danio_rerio
WBGene00021829	mrpl-17	82	31.875	ENSDNOG00000047312	-	58	31.875	Dasypus_novemcinctus
WBGene00021829	mrpl-17	65	34.646	ENSDORG00000026555	Mrpl17	67	37.879	Dipodomys_ordii
WBGene00021829	mrpl-17	70	34.074	ENSEASG00005003093	MRPL17	81	34.416	Equus_asinus_asinus
WBGene00021829	mrpl-17	70	34.074	ENSECAG00000010156	MRPL17	81	34.416	Equus_caballus
WBGene00021829	mrpl-17	82	31.875	ENSEEUG00000013026	MRPL17	85	31.875	Erinaceus_europaeus
WBGene00021829	mrpl-17	75	35.172	ENSELUG00000020191	mrpl17	81	35.172	Esox_lucius
WBGene00021829	mrpl-17	83	30.435	ENSFCAG00000036047	MRPL17	82	31.111	Felis_catus
WBGene00021829	mrpl-17	86	32.934	ENSFDAG00000013150	MRPL17	88	32.934	Fukomys_damarensis
WBGene00021829	mrpl-17	75	35.172	ENSFHEG00000006763	mrpl17	80	35.172	Fundulus_heteroclitus
WBGene00021829	mrpl-17	91	32.768	ENSGMOG00000013596	mrpl17	87	32.768	Gadus_morhua
WBGene00021829	mrpl-17	86	35.928	ENSGALG00000002605	MRPL17	88	35.928	Gallus_gallus
WBGene00021829	mrpl-17	85	32.727	ENSGAFG00000010332	mrpl17	85	32.727	Gambusia_affinis
WBGene00021829	mrpl-17	85	32.727	ENSGACG00000003236	mrpl17	84	32.727	Gasterosteus_aculeatus
WBGene00021829	mrpl-17	93	32.044	ENSGGOG00000038003	MRPL17	91	32.044	Gorilla_gorilla
WBGene00021829	mrpl-17	84	33.333	ENSHBUG00000017678	mrpl17	88	33.333	Haplochromis_burtoni
WBGene00021829	mrpl-17	86	32.335	ENSHGLG00000006859	MRPL17	88	32.335	Heterocephalus_glaber_female
WBGene00021829	mrpl-17	86	32.335	ENSHGLG00100013588	MRPL17	88	32.335	Heterocephalus_glaber_male
WBGene00021829	mrpl-17	80	36.774	ENSHCOG00000011399	mrpl17	86	36.774	Hippocampus_comes
WBGene00021829	mrpl-17	77	34.667	ENSIPUG00000018383	MRPL17	75	34.667	Ictalurus_punctatus
WBGene00021829	mrpl-17	81	32.484	ENSJJAG00000022535	Mrpl17	94	30.159	Jaculus_jaculus
WBGene00021829	mrpl-17	75	34.483	ENSKMAG00000011240	mrpl17	80	34.483	Kryptolebias_marmoratus
WBGene00021829	mrpl-17	85	30.303	ENSLBEG00000003781	mrpl17	86	30.303	Labrus_bergylta
WBGene00021829	mrpl-17	85	33.939	ENSLACG00000015317	MRPL17	82	33.939	Latimeria_chalumnae
WBGene00021829	mrpl-17	87	37.500	ENSLOCG00000004435	mrpl17	87	37.500	Lepisosteus_oculatus
WBGene00021829	mrpl-17	65	34.646	ENSLAFG00000004834	MRPL17	75	33.793	Loxodonta_africana
WBGene00021829	mrpl-17	75	33.793	ENSMFAG00000005488	MRPL17	75	33.793	Macaca_fascicularis
WBGene00021829	mrpl-17	75	33.793	ENSMMUG00000004544	MRPL17	75	33.793	Macaca_mulatta
WBGene00021829	mrpl-17	75	33.793	ENSMNEG00000031071	MRPL17	75	33.793	Macaca_nemestrina
WBGene00021829	mrpl-17	75	33.793	ENSMLEG00000040344	MRPL17	75	33.793	Mandrillus_leucophaeus
WBGene00021829	mrpl-17	94	30.601	ENSMAMG00000005242	mrpl17	93	30.601	Mastacembelus_armatus
WBGene00021829	mrpl-17	84	33.333	ENSMZEG00005003468	mrpl17	88	33.333	Maylandia_zebra
WBGene00021829	mrpl-17	97	30.688	ENSMAUG00000005494	Mrpl17	94	30.688	Mesocricetus_auratus
WBGene00021829	mrpl-17	78	31.579	ENSMICG00000035814	MRPL17	84	31.875	Microcebus_murinus
WBGene00021829	mrpl-17	71	32.847	ENSMOCG00000018077	Mrpl17	88	30.539	Microtus_ochrogaster
WBGene00021829	mrpl-17	75	35.862	ENSMMOG00000015377	mrpl17	80	35.862	Mola_mola
WBGene00021829	mrpl-17	75	34.483	ENSMODG00000018267	MRPL17	83	34.483	Monodelphis_domestica
WBGene00021829	mrpl-17	86	32.934	ENSMALG00000013904	mrpl17	87	32.934	Monopterus_albus
WBGene00021829	mrpl-17	65	36.220	MGP_CAROLIEiJ_G0030241	Mrpl17	88	31.737	Mus_caroli
WBGene00021829	mrpl-17	65	36.220	ENSMUSG00000030879	Mrpl17	75	34.483	Mus_musculus
WBGene00021829	mrpl-17	65	36.220	MGP_PahariEiJ_G0013456	Mrpl17	88	31.737	Mus_pahari
WBGene00021829	mrpl-17	65	36.220	MGP_SPRETEiJ_G0031353	Mrpl17	88	31.737	Mus_spretus
WBGene00021829	mrpl-17	71	33.577	ENSMPUG00000005449	-	62	33.793	Mustela_putorius_furo
WBGene00021829	mrpl-17	71	32.847	ENSMPUG00000018502	-	77	33.103	Mustela_putorius_furo
WBGene00021829	mrpl-17	75	33.793	ENSMLUG00000001144	MRPL17	77	33.793	Myotis_lucifugus
WBGene00021829	mrpl-17	77	32.886	ENSNGAG00000012128	Mrpl17	96	31.250	Nannospalax_galili
WBGene00021829	mrpl-17	84	33.333	ENSNBRG00000015689	mrpl17	88	33.333	Neolamprologus_brichardi
WBGene00021829	mrpl-17	82	31.875	ENSNLEG00000032707	MRPL17	83	31.875	Nomascus_leucogenys
WBGene00021829	mrpl-17	75	35.616	ENSMEUG00000013588	-	84	35.616	Notamacropus_eugenii
WBGene00021829	mrpl-17	70	34.559	ENSOPRG00000008141	MRPL17	75	34.483	Ochotona_princeps
WBGene00021829	mrpl-17	80	34.194	ENSODEG00000009556	MRPL17	81	34.194	Octodon_degus
WBGene00021829	mrpl-17	84	33.333	ENSONIG00000011427	mrpl17	88	33.333	Oreochromis_niloticus
WBGene00021829	mrpl-17	60	31.624	ENSOANG00000007173	-	82	31.624	Ornithorhynchus_anatinus
WBGene00021829	mrpl-17	75	32.192	ENSOCUG00000005726	MRPL17	82	31.138	Oryctolagus_cuniculus
WBGene00021829	mrpl-17	75	36.552	ENSORLG00000028920	mrpl17	80	36.552	Oryzias_latipes
WBGene00021829	mrpl-17	75	36.552	ENSORLG00020000015	mrpl17	80	36.552	Oryzias_latipes_hni
WBGene00021829	mrpl-17	75	36.552	ENSORLG00015005891	mrpl17	80	36.552	Oryzias_latipes_hsok
WBGene00021829	mrpl-17	94	32.418	ENSOMEG00000019409	mrpl17	96	32.418	Oryzias_melastigma
WBGene00021829	mrpl-17	70	34.074	ENSOGAG00000014856	MRPL17	75	33.793	Otolemur_garnettii
WBGene00021829	mrpl-17	70	33.333	ENSOARG00000016577	MRPL17	77	33.103	Ovis_aries
WBGene00021829	mrpl-17	89	31.792	ENSPPAG00000038749	MRPL17	90	31.792	Pan_paniscus
WBGene00021829	mrpl-17	70	34.074	ENSPPRG00000022075	MRPL17	81	34.416	Panthera_pardus
WBGene00021829	mrpl-17	70	34.074	ENSPTIG00000014738	MRPL17	70	34.416	Panthera_tigris_altaica
WBGene00021829	mrpl-17	89	31.792	ENSPTRG00000044450	MRPL17	90	31.792	Pan_troglodytes
WBGene00021829	mrpl-17	75	33.793	ENSPANG00000025791	MRPL17	75	33.793	Papio_anubis
WBGene00021829	mrpl-17	81	32.278	ENSPKIG00000021330	mrpl17	86	32.278	Paramormyrops_kingsleyae
WBGene00021829	mrpl-17	84	32.716	ENSPMGG00000018670	mrpl17	88	32.716	Periophthalmus_magnuspinnatus
WBGene00021829	mrpl-17	65	35.433	ENSPEMG00000012735	Mrpl17	88	31.138	Peromyscus_maniculatus_bairdii
WBGene00021829	mrpl-17	75	35.862	ENSPCIG00000010796	MRPL17	80	35.862	Phascolarctos_cinereus
WBGene00021829	mrpl-17	85	32.727	ENSPFOG00000003148	mrpl17	85	32.727	Poecilia_formosa
WBGene00021829	mrpl-17	85	32.727	ENSPLAG00000007818	mrpl17	85	32.727	Poecilia_latipinna
WBGene00021829	mrpl-17	85	32.727	ENSPMEG00000011833	mrpl17	85	32.727	Poecilia_mexicana
WBGene00021829	mrpl-17	85	32.121	ENSPREG00000014661	mrpl17	85	32.121	Poecilia_reticulata
WBGene00021829	mrpl-17	75	33.793	ENSPPYG00000003534	MRPL17	75	33.793	Pongo_abelii
WBGene00021829	mrpl-17	71	33.577	ENSPCAG00000018837	-	75	33.793	Procavia_capensis
WBGene00021829	mrpl-17	71	33.577	ENSPCAG00000018799	-	75	33.793	Procavia_capensis
WBGene00021829	mrpl-17	70	34.074	ENSPVAG00000006422	MRPL17	77	33.793	Pteropus_vampyrus
WBGene00021829	mrpl-17	84	33.333	ENSPNYG00000015200	mrpl17	88	33.333	Pundamilia_nyererei
WBGene00021829	mrpl-17	77	34.667	ENSPNAG00000026698	mrpl17	77	34.667	Pygocentrus_nattereri
WBGene00021829	mrpl-17	65	35.433	ENSRNOG00000019497	Mrpl17	88	31.138	Rattus_norvegicus
WBGene00021829	mrpl-17	78	31.788	ENSRBIG00000040233	MRPL17	87	31.875	Rhinopithecus_bieti
WBGene00021829	mrpl-17	78	31.788	ENSRROG00000032283	MRPL17	85	31.875	Rhinopithecus_roxellana
WBGene00021829	mrpl-17	75	33.793	ENSSBOG00000031626	MRPL17	75	33.793	Saimiri_boliviensis_boliviensis
WBGene00021829	mrpl-17	72	35.252	ENSSHAG00000010208	MRPL17	80	35.862	Sarcophilus_harrisii
WBGene00021829	mrpl-17	85	33.333	ENSSFOG00015021634	mrpl17	89	33.333	Scleropages_formosus
WBGene00021829	mrpl-17	87	32.738	ENSSMAG00000006719	mrpl17	88	32.738	Scophthalmus_maximus
WBGene00021829	mrpl-17	85	31.515	ENSSDUG00000001234	mrpl17	86	31.515	Seriola_dumerili
WBGene00021829	mrpl-17	85	31.515	ENSSLDG00000000596	mrpl17	86	31.515	Seriola_lalandi_dorsalis
WBGene00021829	mrpl-17	75	38.621	ENSSPUG00000015486	MRPL17	79	38.621	Sphenodon_punctatus
WBGene00021829	mrpl-17	75	34.483	ENSSPAG00000000386	mrpl17	80	34.483	Stegastes_partitus
WBGene00021829	mrpl-17	70	34.074	ENSSSCG00000024693	MRPL17	88	33.129	Sus_scrofa
WBGene00021829	mrpl-17	75	40.000	ENSTGUG00000001893	MRPL17	80	40.000	Taeniopygia_guttata
WBGene00021829	mrpl-17	72	36.429	ENSTNIG00000008195	mrpl17	78	36.429	Tetraodon_nigroviridis
WBGene00021829	mrpl-17	65	34.646	ENSTTRG00000004903	MRPL17	77	33.103	Tursiops_truncatus
WBGene00021829	mrpl-17	70	34.074	ENSUAMG00000025644	MRPL17	66	34.416	Ursus_americanus
WBGene00021829	mrpl-17	66	34.375	ENSUMAG00000000411	MRPL17	66	34.416	Ursus_maritimus
WBGene00021829	mrpl-17	70	34.815	ENSVPAG00000008874	MRPL17	78	33.103	Vicugna_pacos
WBGene00021829	mrpl-17	71	33.577	ENSVVUG00000024084	MRPL17	61	33.793	Vulpes_vulpes
WBGene00021829	mrpl-17	85	32.121	ENSXCOG00000019115	mrpl17	86	32.121	Xiphophorus_couchianus
WBGene00021829	mrpl-17	85	32.727	ENSXMAG00000006741	mrpl17	86	32.727	Xiphophorus_maculatus