EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
WBGene00021830 (Gene tree)
Gene ID
-
Gene Symbol
Y54E10A.10
Alias
-
Full Name
Ribosome production factor 2 homolog
Gene Type
protein_coding
Species
Caenorhabditis_elegans
Status
confidence
Strand
Minus strand
Length
3077 bases
Position
chrI:3173243-3176319
Accession
Q9N3F0
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
Y54E10ABrixPF04427.182.4e-3011
Y54E10ABrixPF04427.182.4e-3011
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26595419Conserved mRNA binding proteomes in eukaryotic organismsmRBPome & elegans2015 Nov 23Matia-Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
Y54E10A.10.1-994NM_058716Y54E10A.10.1297 (aa)NP_491117Q9N3F0
Y54E10A.10.2-1019NM_058716Y54E10A.10.2297 (aa)NP_491117Q9N3F0
Gene Model
Click here to download WBGene00021830's gene model file
Protein-Protein Interaction (PPI)

Clik here to download WBGene00021830's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
WBGene00021830Y54E10A.109643.310ENSG00000197498RPF29941.589Homo_sapiens
WBGene00021830Y54E10A.109545.552ENSAPOG00000005714rpf29145.552Acanthochromis_polyacanthus
WBGene00021830Y54E10A.109642.958ENSAMEG00000015753RPF29242.958Ailuropoda_melanoleuca
WBGene00021830Y54E10A.109545.907ENSAOCG00000005173rpf29145.907Amphiprion_ocellaris
WBGene00021830Y54E10A.109545.907ENSAPEG00000004003rpf29145.907Amphiprion_percula
WBGene00021830Y54E10A.109545.552ENSATEG00000012818rpf29145.552Anabas_testudineus
WBGene00021830Y54E10A.109042.697ENSAPLG00000008812RPF29742.697Anas_platyrhynchos
WBGene00021830Y54E10A.109644.014ENSACAG00000011270RPF29244.014Anolis_carolinensis
WBGene00021830Y54E10A.109632.394ENSANAG00000021067-9132.394Aotus_nancymaae
WBGene00021830Y54E10A.109534.722ENSANAG00000025459-9534.722Aotus_nancymaae
WBGene00021830Y54E10A.109642.606ENSANAG00000026549-9242.606Aotus_nancymaae
WBGene00021830Y54E10A.109641.197ENSANAG00000034834-9241.197Aotus_nancymaae
WBGene00021830Y54E10A.109533.216ENSANAG00000033736-9433.216Aotus_nancymaae
WBGene00021830Y54E10A.109544.484ENSAMXG00000035201rpf29144.484Astyanax_mexicanus
WBGene00021830Y54E10A.109643.310ENSBTAG00000016584RPF29243.310Bos_taurus
WBGene00021830Y54E10A.109643.310ENSCJAG00000038330RPF29243.310Callithrix_jacchus
WBGene00021830Y54E10A.109643.310ENSCAFG00000003918RPF29243.310Canis_familiaris
WBGene00021830Y54E10A.109641.901ENSCHIG00000022499RPF29241.901Capra_hircus
WBGene00021830Y54E10A.109642.254ENSTSYG00000013924RPF29242.254Carlito_syrichta
WBGene00021830Y54E10A.109434.409ENSCAPG00000014257RPF28934.409Cavia_aperea
WBGene00021830Y54E10A.109643.662ENSCPOG00000006797RPF29840.143Cavia_porcellus
WBGene00021830Y54E10A.109642.958ENSCCAG00000030864-9242.958Cebus_capucinus
WBGene00021830Y54E10A.109332.971ENSCCAG00000028553-8932.971Cebus_capucinus
WBGene00021830Y54E10A.108637.262ENSCCAG00000028906-9537.262Cebus_capucinus
WBGene00021830Y54E10A.109642.606ENSCCAG00000030365-9242.606Cebus_capucinus
WBGene00021830Y54E10A.108537.795ENSCATG00000034352-9437.795Cercocebus_atys
WBGene00021830Y54E10A.108935.316ENSCATG00000029725-9835.316Cercocebus_atys
WBGene00021830Y54E10A.109532.292ENSCLAG00000010874-9532.986Chinchilla_lanigera
WBGene00021830Y54E10A.105738.462ENSCLAG00000013252-7438.462Chinchilla_lanigera
WBGene00021830Y54E10A.109643.310ENSCLAG00000010393-9839.785Chinchilla_lanigera
WBGene00021830Y54E10A.109641.197ENSCHOG00000005865RPF29241.197Choloepus_hoffmanni
WBGene00021830Y54E10A.109841.781ENSCPBG00000006504RPF29541.781Chrysemys_picta_bellii
WBGene00021830Y54E10A.109541.343ENSCING00000008090-9241.696Ciona_intestinalis
WBGene00021830Y54E10A.109543.816ENSCSAVG00000010672-9543.816Ciona_savignyi
WBGene00021830Y54E10A.109643.310ENSCANG00000030665RPF29243.310Colobus_angolensis_palliatus
WBGene00021830Y54E10A.109843.836ENSCGRG00001007331-9543.836Cricetulus_griseus_chok1gshd
WBGene00021830Y54E10A.109635.563ENSCGRG00001005262-9035.563Cricetulus_griseus_chok1gshd
WBGene00021830Y54E10A.109843.793ENSCGRG00000006083Rpf29840.502Cricetulus_griseus_crigri
WBGene00021830Y54E10A.109544.840ENSCSEG00000015725rpf29244.840Cynoglossus_semilaevis
WBGene00021830Y54E10A.109545.552ENSCVAG00000001072rpf29245.552Cyprinodon_variegatus
WBGene00021830Y54E10A.109741.980ENSDARG00000043960rpf29541.980Danio_rerio
WBGene00021830Y54E10A.106245.946ENSDNOG00000039270RPF28945.946Dasypus_novemcinctus
WBGene00021830Y54E10A.105750.538ENSDORG00000026915Rpf29650.538Dipodomys_ordii
WBGene00021830Y54E10A.109641.958FBgn0038585Non38941.958Drosophila_melanogaster
WBGene00021830Y54E10A.109541.637ENSEBUG00000003640rpf28541.637Eptatretus_burgeri
WBGene00021830Y54E10A.109641.958ENSEASG00005006927-9241.958Equus_asinus_asinus
WBGene00021830Y54E10A.109643.310ENSECAG00000017121RPF29243.310Equus_caballus
WBGene00021830Y54E10A.109535.587ENSEEUG00000006169RPF29435.587Erinaceus_europaeus
WBGene00021830Y54E10A.109746.367ENSELUG00000018518rpf29546.367Esox_lucius
WBGene00021830Y54E10A.109643.310ENSFCAG00000001527RPF29243.310Felis_catus
WBGene00021830Y54E10A.109940.956ENSFALG00000010816RPF29540.956Ficedula_albicollis
WBGene00021830Y54E10A.109037.218ENSFDAG00000016721-9837.218Fukomys_damarensis
WBGene00021830Y54E10A.109643.310ENSFDAG00000005811-9840.143Fukomys_damarensis
WBGene00021830Y54E10A.109545.196ENSFHEG00000011243rpf29145.196Fundulus_heteroclitus
WBGene00021830Y54E10A.109340.072ENSGMOG00000002521rpf29340.072Gadus_morhua
WBGene00021830Y54E10A.109941.156ENSGALG00000037087RPF29641.156Gallus_gallus
WBGene00021830Y54E10A.109544.484ENSGAFG00000009537rpf29244.484Gambusia_affinis
WBGene00021830Y54E10A.109544.484ENSGACG00000006507rpf29144.484Gasterosteus_aculeatus
WBGene00021830Y54E10A.109840.411ENSGAGG00000016221RPF29540.411Gopherus_agassizii
WBGene00021830Y54E10A.109540.071ENSGGOG00000024187-9840.071Gorilla_gorilla
WBGene00021830Y54E10A.109633.803ENSGGOG00000001469RPF29133.803Gorilla_gorilla
WBGene00021830Y54E10A.109545.907ENSHBUG00000021805rpf29145.907Haplochromis_burtoni
WBGene00021830Y54E10A.109639.789ENSHGLG00000012697-9839.789Heterocephalus_glaber_female
WBGene00021830Y54E10A.109639.085ENSHGLG00000012500-7539.085Heterocephalus_glaber_female
WBGene00021830Y54E10A.109643.662ENSHGLG00000001322RPF29840.143Heterocephalus_glaber_female
WBGene00021830Y54E10A.107135.545ENSHGLG00100009310-9335.156Heterocephalus_glaber_male
WBGene00021830Y54E10A.109537.943ENSHGLG00100002981-9837.943Heterocephalus_glaber_male
WBGene00021830Y54E10A.109638.732ENSHGLG00100012473-9138.732Heterocephalus_glaber_male
WBGene00021830Y54E10A.109643.662ENSHGLG00100012131RPF29840.143Heterocephalus_glaber_male
WBGene00021830Y54E10A.109639.789ENSHGLG00100000462-9839.789Heterocephalus_glaber_male
WBGene00021830Y54E10A.109545.907ENSHCOG00000000225rpf29344.803Hippocampus_comes
WBGene00021830Y54E10A.109537.722ENSIPUG00000016288rpf29137.722Ictalurus_punctatus
WBGene00021830Y54E10A.109636.364ENSSTOG00000013114RPF29834.050Ictidomys_tridecemlineatus
WBGene00021830Y54E10A.109541.993ENSJJAG00000009092Rpf29840.860Jaculus_jaculus
WBGene00021830Y54E10A.109545.907ENSKMAG00000014609rpf29145.907Kryptolebias_marmoratus
WBGene00021830Y54E10A.109545.907ENSLBEG00000011907rpf29043.060Labrus_bergylta
WBGene00021830Y54E10A.109844.178ENSLACG00000003942RPF29444.178Latimeria_chalumnae
WBGene00021830Y54E10A.109545.070ENSLOCG00000016992rpf29245.070Lepisosteus_oculatus
WBGene00021830Y54E10A.109642.958ENSLAFG00000018219RPF29242.958Loxodonta_africana
WBGene00021830Y54E10A.109643.310ENSMFAG00000000417RPF29243.310Macaca_fascicularis
WBGene00021830Y54E10A.108935.714ENSMFAG00000036119-9835.714Macaca_fascicularis
WBGene00021830Y54E10A.109635.889ENSMMUG00000042376-9335.889Macaca_mulatta
WBGene00021830Y54E10A.109643.310ENSMMUG00000021532RPF29941.589Macaca_mulatta
WBGene00021830Y54E10A.109634.155ENSMNEG00000031683RPF29134.155Macaca_nemestrina
WBGene00021830Y54E10A.109635.315ENSMLEG00000042472-9335.315Mandrillus_leucophaeus
WBGene00021830Y54E10A.109845.361ENSMAMG00000004267rpf29445.361Mastacembelus_armatus
WBGene00021830Y54E10A.109545.907ENSMZEG00005015632rpf29145.907Maylandia_zebra
WBGene00021830Y54E10A.109940.476ENSMGAG00000013429RPF29640.476Meleagris_gallopavo
WBGene00021830Y54E10A.109838.356ENSMICG00000038169-9438.356Microcebus_murinus
WBGene00021830Y54E10A.109836.860ENSMICG00000028979-9536.860Microcebus_murinus
WBGene00021830Y54E10A.109843.836ENSMICG00000032086-9347.097Microcebus_murinus
WBGene00021830Y54E10A.109543.772ENSMOCG00000005634Rpf29840.502Microtus_ochrogaster
WBGene00021830Y54E10A.109444.086ENSMMOG00000014844rpf29244.086Mola_mola
WBGene00021830Y54E10A.109544.840ENSMODG00000017919RPF29244.840Monodelphis_domestica
WBGene00021830Y54E10A.109844.330ENSMALG00000019046rpf29444.330Monopterus_albus
WBGene00021830Y54E10A.109943.051MGP_CAROLIEiJ_G0015254Rpf29840.502Mus_caroli
WBGene00021830Y54E10A.109644.014ENSMUSG00000038510Rpf29840.860Mus_musculus
WBGene00021830Y54E10A.109943.729MGP_PahariEiJ_G0030671Rpf29841.219Mus_pahari
WBGene00021830Y54E10A.109644.014MGP_SPRETEiJ_G0016063Rpf29840.860Mus_spretus
WBGene00021830Y54E10A.109643.310ENSMPUG00000010183RPF28043.310Mustela_putorius_furo
WBGene00021830Y54E10A.108244.082ENSMLUG00000005676RPF29344.118Myotis_lucifugus
WBGene00021830Y54E10A.109943.729ENSNGAG00000009701Rpf29840.860Nannospalax_galili
WBGene00021830Y54E10A.109545.552ENSNBRG00000011087rpf29145.552Neolamprologus_brichardi
WBGene00021830Y54E10A.109139.114ENSNLEG00000033597-8839.114Nomascus_leucogenys
WBGene00021830Y54E10A.107940.678ENSNLEG00000011848-9740.678Nomascus_leucogenys
WBGene00021830Y54E10A.109643.310ENSNLEG00000027819RPF29243.310Nomascus_leucogenys
WBGene00021830Y54E10A.109435.484ENSMEUG00000006421RPF29435.484Notamacropus_eugenii
WBGene00021830Y54E10A.109638.380ENSODEG00000006584-9238.380Octodon_degus
WBGene00021830Y54E10A.108836.398ENSODEG00000006939-9536.398Octodon_degus
WBGene00021830Y54E10A.109336.957ENSODEG00000003531-10036.957Octodon_degus
WBGene00021830Y54E10A.109543.060ENSODEG00000013529-9839.785Octodon_degus
WBGene00021830Y54E10A.109639.789ENSODEG00000019144-9239.789Octodon_degus
WBGene00021830Y54E10A.109035.955ENSODEG00000002442-9135.955Octodon_degus
WBGene00021830Y54E10A.109545.907ENSONIG00000011383rpf29145.907Oreochromis_niloticus
WBGene00021830Y54E10A.109942.712ENSOCUG00000016028RPF29642.712Oryctolagus_cuniculus
WBGene00021830Y54E10A.109543.772ENSORLG00000015183rpf29143.772Oryzias_latipes
WBGene00021830Y54E10A.109543.772ENSORLG00020008756rpf28943.369Oryzias_latipes_hni
WBGene00021830Y54E10A.109543.772ENSORLG00015003841RPF29143.772Oryzias_latipes_hsok
WBGene00021830Y54E10A.109544.484ENSOMEG00000011508rpf29144.484Oryzias_melastigma
WBGene00021830Y54E10A.109642.958ENSOGAG00000007438RPF29242.958Otolemur_garnettii
WBGene00021830Y54E10A.109643.310ENSOARG00000015548-9243.310Ovis_aries
WBGene00021830Y54E10A.109643.310ENSOARG00000009886-9243.310Ovis_aries
WBGene00021830Y54E10A.109643.310ENSPPAG00000035622RPF29243.310Pan_paniscus
WBGene00021830Y54E10A.108940.909ENSPPAG00000032089-9440.909Pan_paniscus
WBGene00021830Y54E10A.109636.806ENSPPRG00000008363-9436.806Panthera_pardus
WBGene00021830Y54E10A.109643.662ENSPPRG00000000320-9243.662Panthera_pardus
WBGene00021830Y54E10A.109643.662ENSPTIG00000002060RPF29243.662Panthera_tigris_altaica
WBGene00021830Y54E10A.109643.310ENSPTRG00000018503RPF29243.310Pan_troglodytes
WBGene00021830Y54E10A.109643.310ENSPANG00000018834RPF29243.310Papio_anubis
WBGene00021830Y54E10A.109544.681ENSPKIG00000019506rpf29244.681Paramormyrops_kingsleyae
WBGene00021830Y54E10A.109841.096ENSPSIG00000014887RPF29541.096Pelodiscus_sinensis
WBGene00021830Y54E10A.109440.860ENSPEMG00000011413Rpf29840.860Peromyscus_maniculatus_bairdii
WBGene00021830Y54E10A.109644.014ENSPCIG00000028172RPF29144.014Phascolarctos_cinereus
WBGene00021830Y54E10A.109545.196ENSPFOG00000003396rpf29245.196Poecilia_formosa
WBGene00021830Y54E10A.109545.196ENSPLAG00000001226rpf29245.196Poecilia_latipinna
WBGene00021830Y54E10A.109545.196ENSPMEG00000007781rpf29245.196Poecilia_mexicana
WBGene00021830Y54E10A.109544.840ENSPREG00000020525rpf29244.840Poecilia_reticulata
WBGene00021830Y54E10A.109643.310ENSPPYG00000016925RPF29243.310Pongo_abelii
WBGene00021830Y54E10A.106644.615ENSPCAG00000002562RPF27944.615Procavia_capensis
WBGene00021830Y54E10A.109535.889ENSPCOG00000012785RPF29135.889Propithecus_coquereli
WBGene00021830Y54E10A.108044.304ENSPVAG00000003446RPF27744.304Pteropus_vampyrus
WBGene00021830Y54E10A.109544.128ENSPNAG00000000082rpf29144.128Pygocentrus_nattereri
WBGene00021830Y54E10A.109944.068ENSRNOG00000000587Rpf29444.068Rattus_norvegicus
WBGene00021830Y54E10A.109642.958ENSRBIG00000038389RPF29242.958Rhinopithecus_bieti
WBGene00021830Y54E10A.108140.249ENSRROG00000036685-9240.249Rhinopithecus_roxellana
WBGene00021830Y54E10A.108939.098ENSRROG00000039510-9839.098Rhinopithecus_roxellana
WBGene00021830Y54E10A.108036.820ENSRROG00000028992-7936.820Rhinopithecus_roxellana
WBGene00021830Y54E10A.109642.958ENSRROG00000036457RPF29342.958Rhinopithecus_roxellana
WBGene00021830Y54E10A.109537.755YKR081C-8537.755Saccharomyces_cerevisiae
WBGene00021830Y54E10A.109034.962ENSSBOG00000025434-9334.962Saimiri_boliviensis_boliviensis
WBGene00021830Y54E10A.108133.750ENSSBOG00000029182-9133.750Saimiri_boliviensis_boliviensis
WBGene00021830Y54E10A.109031.955ENSSBOG00000030264-9731.955Saimiri_boliviensis_boliviensis
WBGene00021830Y54E10A.108636.614ENSSBOG00000022486-8736.614Saimiri_boliviensis_boliviensis
WBGene00021830Y54E10A.109532.509ENSSBOG00000034420-9332.509Saimiri_boliviensis_boliviensis
WBGene00021830Y54E10A.109644.014ENSSHAG00000002212RPF29244.014Sarcophilus_harrisii
WBGene00021830Y54E10A.109544.128ENSSFOG00015020916rpf29144.128Scleropages_formosus
WBGene00021830Y54E10A.109546.263ENSSMAG00000017499rpf29146.263Scophthalmus_maximus
WBGene00021830Y54E10A.109445.520ENSSDUG00000010383rpf28845.520Seriola_dumerili
WBGene00021830Y54E10A.109546.619ENSSLDG00000022111rpf29146.619Seriola_lalandi_dorsalis
WBGene00021830Y54E10A.109632.746ENSSARG00000012063RPF29232.746Sorex_araneus
WBGene00021830Y54E10A.109741.781ENSSPUG00000005108RPF29041.901Sphenodon_punctatus
WBGene00021830Y54E10A.109545.552ENSSPAG00000008035rpf29145.552Stegastes_partitus
WBGene00021830Y54E10A.109642.254ENSSSCG00000004394RPF29242.254Sus_scrofa
WBGene00021830Y54E10A.109940.476ENSTGUG00000012034RPF29540.476Taeniopygia_guttata
WBGene00021830Y54E10A.109345.848ENSTRUG00000018264rpf29045.848Takifugu_rubripes
WBGene00021830Y54E10A.109440.860ENSTNIG00000002749rpf29040.860Tetraodon_nigroviridis
WBGene00021830Y54E10A.106946.117ENSTBEG00000017151RPF26746.117Tupaia_belangeri
WBGene00021830Y54E10A.109642.958ENSTTRG00000012357RPF29242.958Tursiops_truncatus
WBGene00021830Y54E10A.109643.310ENSUAMG00000013497RPF29243.310Ursus_americanus
WBGene00021830Y54E10A.109642.958ENSUMAG00000025488RPF29242.958Ursus_maritimus
WBGene00021830Y54E10A.109642.958ENSVPAG00000009562RPF29342.958Vicugna_pacos
WBGene00021830Y54E10A.109640.141ENSVVUG00000006593-9240.141Vulpes_vulpes
WBGene00021830Y54E10A.106946.117ENSVVUG00000021231-8146.117Vulpes_vulpes
WBGene00021830Y54E10A.109645.423ENSXETG00000021335rpf29245.423Xenopus_tropicalis
WBGene00021830Y54E10A.109542.705ENSXCOG00000001590rpf29242.705Xiphophorus_couchianus
WBGene00021830Y54E10A.109540.569ENSXMAG00000021706rpf29140.569Xiphophorus_maculatus

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