EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00021841 (Gene tree)
Gene ID: -
Gene Symbol: Y54E10BR.2
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 1827 bases
Position: chrI:3032935-3034761
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y54E10BR	MMR_HSR1	PF01926.23	3.4e-07	1	1
Y54E10BR	MMR_HSR1	PF01926.23	3.4e-07	1	1
Y54E10BR	MMR_HSR1	PF01926.23	3.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y54E10BR.2.2	-	845	-	Y54E10BR.2.2	191 (aa)	NP_491094	Q9N3C8
Y54E10BR.2.3	-	845	-	Y54E10BR.2.3	191 (aa)	NP_491094	Q9N3C8
Y54E10BR.2.1	-	963	-	Y54E10BR.2.1	191 (aa)	NP_491094	Q9N3C8

Gene Model

Click here to download WBGene00021841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021841's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00021841	Y54E10BR.2	96	31.720	WBGene00000189	arl-5	100	31.720
WBGene00021841	Y54E10BR.2	88	30.994	WBGene00000188	arl-3	89	30.994

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021841	Y54E10BR.2	96	39.572	ENSG00000101246	ARFRP1	100	41.618	Homo_sapiens
WBGene00021841	Y54E10BR.2	96	39.037	ENSAPOG00000010944	arfrp1	93	39.037	Acanthochromis_polyacanthus
WBGene00021841	Y54E10BR.2	96	38.503	ENSAMEG00000001741	ARFRP1	93	38.503	Ailuropoda_melanoleuca
WBGene00021841	Y54E10BR.2	96	39.037	ENSACIG00000009740	arfrp1	93	39.037	Amphilophus_citrinellus
WBGene00021841	Y54E10BR.2	96	39.037	ENSAOCG00000003286	arfrp1	93	39.037	Amphiprion_ocellaris
WBGene00021841	Y54E10BR.2	96	39.037	ENSAPEG00000003601	arfrp1	93	39.037	Amphiprion_percula
WBGene00021841	Y54E10BR.2	96	39.037	ENSATEG00000002756	arfrp1	93	39.037	Anabas_testudineus
WBGene00021841	Y54E10BR.2	96	37.968	ENSAPLG00000014398	ARFRP1	93	37.968	Anas_platyrhynchos
WBGene00021841	Y54E10BR.2	96	36.898	ENSACAG00000013752	ARFRP1	93	36.898	Anolis_carolinensis
WBGene00021841	Y54E10BR.2	96	39.572	ENSANAG00000036343	ARFRP1	85	53.398	Aotus_nancymaae
WBGene00021841	Y54E10BR.2	96	38.503	ENSACLG00000002442	arfrp1	90	38.503	Astatotilapia_calliptera
WBGene00021841	Y54E10BR.2	96	38.503	ENSAMXG00000042798	arfrp1	93	38.503	Astyanax_mexicanus
WBGene00021841	Y54E10BR.2	96	39.037	ENSBTAG00000007497	ARFRP1	93	39.037	Bos_taurus
WBGene00021841	Y54E10BR.2	96	39.037	ENSCJAG00000010382	ARFRP1	85	53.398	Callithrix_jacchus
WBGene00021841	Y54E10BR.2	96	38.503	ENSCAFG00000030493	ARFRP1	93	38.503	Canis_familiaris
WBGene00021841	Y54E10BR.2	96	39.037	ENSCAFG00020001953	ARFRP1	93	39.037	Canis_lupus_dingo
WBGene00021841	Y54E10BR.2	96	39.037	ENSCHIG00000010007	ARFRP1	93	39.037	Capra_hircus
WBGene00021841	Y54E10BR.2	96	39.572	ENSTSYG00000033120	ARFRP1	88	52.830	Carlito_syrichta
WBGene00021841	Y54E10BR.2	96	39.037	ENSCPOG00000038193	ARFRP1	93	39.037	Cavia_porcellus
WBGene00021841	Y54E10BR.2	96	39.572	ENSCCAG00000022484	ARFRP1	97	48.718	Cebus_capucinus
WBGene00021841	Y54E10BR.2	96	39.572	ENSCATG00000039104	ARFRP1	85	53.398	Cercocebus_atys
WBGene00021841	Y54E10BR.2	96	39.037	ENSCLAG00000004200	ARFRP1	93	39.037	Chinchilla_lanigera
WBGene00021841	Y54E10BR.2	96	39.572	ENSCSAG00000016609	ARFRP1	93	39.572	Chlorocebus_sabaeus
WBGene00021841	Y54E10BR.2	96	37.433	ENSCPBG00000014731	ARFRP1	93	37.433	Chrysemys_picta_bellii
WBGene00021841	Y54E10BR.2	98	35.602	ENSCING00000024645	-	95	35.602	Ciona_intestinalis
WBGene00021841	Y54E10BR.2	96	39.037	ENSCGRG00001001706	Arfrp1	93	39.037	Cricetulus_griseus_chok1gshd
WBGene00021841	Y54E10BR.2	96	39.037	ENSCGRG00000014284	Arfrp1	93	39.037	Cricetulus_griseus_crigri
WBGene00021841	Y54E10BR.2	96	37.433	ENSCSEG00000013577	arfrp1	93	37.433	Cynoglossus_semilaevis
WBGene00021841	Y54E10BR.2	96	39.037	ENSDARG00000057857	arfrp1	92	41.040	Danio_rerio
WBGene00021841	Y54E10BR.2	96	39.572	ENSDNOG00000001531	-	62	39.572	Dasypus_novemcinctus
WBGene00021841	Y54E10BR.2	96	39.037	ENSDORG00000013488	Arfrp1	93	39.037	Dipodomys_ordii
WBGene00021841	Y54E10BR.2	96	38.503	FBgn0030088	Arfrp1	94	38.503	Drosophila_melanogaster
WBGene00021841	Y54E10BR.2	96	40.107	ENSEBUG00000013459	arfrp1	78	40.107	Eptatretus_burgeri
WBGene00021841	Y54E10BR.2	96	38.503	ENSECAG00000019636	ARFRP1	93	38.503	Equus_caballus
WBGene00021841	Y54E10BR.2	96	37.968	ENSELUG00000013412	arfrp1	93	37.968	Esox_lucius
WBGene00021841	Y54E10BR.2	96	38.503	ENSFCAG00000044777	ARFRP1	84	53.398	Felis_catus
WBGene00021841	Y54E10BR.2	96	38.503	ENSFALG00000005905	ARFRP1	93	38.503	Ficedula_albicollis
WBGene00021841	Y54E10BR.2	96	40.107	ENSFDAG00000002842	ARFRP1	93	40.107	Fukomys_damarensis
WBGene00021841	Y54E10BR.2	96	37.968	ENSFHEG00000000458	arfrp1	93	37.968	Fundulus_heteroclitus
WBGene00021841	Y54E10BR.2	96	39.572	ENSGMOG00000015683	arfrp1	93	39.572	Gadus_morhua
WBGene00021841	Y54E10BR.2	96	37.968	ENSGALG00000006101	ARFRP1	93	37.968	Gallus_gallus
WBGene00021841	Y54E10BR.2	96	37.968	ENSGAFG00000006962	arfrp1	93	37.968	Gambusia_affinis
WBGene00021841	Y54E10BR.2	96	37.968	ENSGACG00000011497	arfrp1	93	37.968	Gasterosteus_aculeatus
WBGene00021841	Y54E10BR.2	96	37.433	ENSGAGG00000019506	ARFRP1	93	37.433	Gopherus_agassizii
WBGene00021841	Y54E10BR.2	96	39.572	ENSGGOG00000004799	ARFRP1	85	53.398	Gorilla_gorilla
WBGene00021841	Y54E10BR.2	96	39.572	ENSHGLG00000012078	ARFRP1	93	39.572	Heterocephalus_glaber_female
WBGene00021841	Y54E10BR.2	96	39.572	ENSHGLG00100004198	ARFRP1	93	39.572	Heterocephalus_glaber_male
WBGene00021841	Y54E10BR.2	96	37.634	ENSHCOG00000005225	arfrp1	93	37.634	Hippocampus_comes
WBGene00021841	Y54E10BR.2	96	38.503	ENSIPUG00000024487	arfrp1	93	38.503	Ictalurus_punctatus
WBGene00021841	Y54E10BR.2	96	40.107	ENSSTOG00000011978	ARFRP1	93	40.107	Ictidomys_tridecemlineatus
WBGene00021841	Y54E10BR.2	96	40.107	ENSJJAG00000013827	Arfrp1	93	40.107	Jaculus_jaculus
WBGene00021841	Y54E10BR.2	96	37.968	ENSKMAG00000016837	arfrp1	93	37.968	Kryptolebias_marmoratus
WBGene00021841	Y54E10BR.2	96	38.503	ENSLBEG00000004752	arfrp1	93	38.503	Labrus_bergylta
WBGene00021841	Y54E10BR.2	53	52.941	ENSLACG00000001971	ARFRP1	87	52.941	Latimeria_chalumnae
WBGene00021841	Y54E10BR.2	77	43.243	ENSLOCG00000001677	arfrp1	73	43.243	Lepisosteus_oculatus
WBGene00021841	Y54E10BR.2	96	38.503	ENSLAFG00000010685	ARFRP1	93	38.503	Loxodonta_africana
WBGene00021841	Y54E10BR.2	54	53.398	ENSMFAG00000001321	ARFRP1	85	53.398	Macaca_fascicularis
WBGene00021841	Y54E10BR.2	96	39.572	ENSMMUG00000000169	ARFRP1	85	53.398	Macaca_mulatta
WBGene00021841	Y54E10BR.2	96	39.572	ENSMNEG00000036325	ARFRP1	85	53.398	Macaca_nemestrina
WBGene00021841	Y54E10BR.2	96	39.572	ENSMLEG00000034228	ARFRP1	85	53.398	Mandrillus_leucophaeus
WBGene00021841	Y54E10BR.2	96	39.572	ENSMAMG00000019501	arfrp1	93	39.572	Mastacembelus_armatus
WBGene00021841	Y54E10BR.2	96	38.503	ENSMZEG00005022808	arfrp1	93	38.503	Maylandia_zebra
WBGene00021841	Y54E10BR.2	96	37.968	ENSMGAG00000006829	ARFRP1	93	37.968	Meleagris_gallopavo
WBGene00021841	Y54E10BR.2	96	39.037	ENSMAUG00000006741	Arfrp1	93	39.037	Mesocricetus_auratus
WBGene00021841	Y54E10BR.2	96	39.572	ENSMICG00000008840	ARFRP1	84	53.398	Microcebus_murinus
WBGene00021841	Y54E10BR.2	96	39.037	ENSMOCG00000003005	Arfrp1	93	39.037	Microtus_ochrogaster
WBGene00021841	Y54E10BR.2	96	38.503	ENSMMOG00000009657	arfrp1	93	38.503	Mola_mola
WBGene00021841	Y54E10BR.2	96	36.898	ENSMODG00000017011	ARFRP1	93	36.898	Monodelphis_domestica
WBGene00021841	Y54E10BR.2	96	39.037	MGP_CAROLIEiJ_G0024805	Arfrp1	85	53.398	Mus_caroli
WBGene00021841	Y54E10BR.2	96	39.037	ENSMUSG00000038671	Arfrp1	85	53.398	Mus_musculus
WBGene00021841	Y54E10BR.2	96	39.037	MGP_PahariEiJ_G0026253	Arfrp1	85	53.398	Mus_pahari
WBGene00021841	Y54E10BR.2	96	39.037	MGP_SPRETEiJ_G0025731	Arfrp1	85	53.398	Mus_spretus
WBGene00021841	Y54E10BR.2	96	37.968	ENSMPUG00000008452	ARFRP1	93	37.968	Mustela_putorius_furo
WBGene00021841	Y54E10BR.2	96	39.037	ENSMLUG00000005259	ARFRP1	93	39.037	Myotis_lucifugus
WBGene00021841	Y54E10BR.2	96	39.572	ENSNGAG00000014373	Arfrp1	93	39.572	Nannospalax_galili
WBGene00021841	Y54E10BR.2	96	39.572	ENSNLEG00000010131	ARFRP1	85	53.398	Nomascus_leucogenys
WBGene00021841	Y54E10BR.2	96	36.898	ENSMEUG00000011934	ARFRP1	93	36.898	Notamacropus_eugenii
WBGene00021841	Y54E10BR.2	96	40.642	ENSOPRG00000003002	-	93	40.642	Ochotona_princeps
WBGene00021841	Y54E10BR.2	96	39.572	ENSODEG00000006629	ARFRP1	93	39.572	Octodon_degus
WBGene00021841	Y54E10BR.2	96	38.503	ENSONIG00000005124	arfrp1	93	38.503	Oreochromis_niloticus
WBGene00021841	Y54E10BR.2	96	37.433	ENSOANG00000004933	ARFRP1	58	37.433	Ornithorhynchus_anatinus
WBGene00021841	Y54E10BR.2	96	37.433	ENSORLG00000010647	arfrp1	93	37.433	Oryzias_latipes
WBGene00021841	Y54E10BR.2	96	37.433	ENSORLG00020004500	arfrp1	93	37.433	Oryzias_latipes_hni
WBGene00021841	Y54E10BR.2	96	37.433	ENSORLG00015022049	arfrp1	93	37.433	Oryzias_latipes_hsok
WBGene00021841	Y54E10BR.2	96	37.433	ENSOMEG00000001352	arfrp1	93	37.433	Oryzias_melastigma
WBGene00021841	Y54E10BR.2	96	39.572	ENSOGAG00000026673	ARFRP1	93	39.572	Otolemur_garnettii
WBGene00021841	Y54E10BR.2	96	39.037	ENSOARG00000010188	ARFRP1	93	39.037	Ovis_aries
WBGene00021841	Y54E10BR.2	96	39.572	ENSPPAG00000023993	ARFRP1	85	53.398	Pan_paniscus
WBGene00021841	Y54E10BR.2	96	38.503	ENSPPRG00000024309	ARFRP1	84	53.398	Panthera_pardus
WBGene00021841	Y54E10BR.2	98	37.949	ENSPTIG00000021097	ARFRP1	84	53.398	Panthera_tigris_altaica
WBGene00021841	Y54E10BR.2	96	39.572	ENSPTRG00000013747	ARFRP1	85	53.398	Pan_troglodytes
WBGene00021841	Y54E10BR.2	96	39.572	ENSPTRG00000044739	-	93	39.572	Pan_troglodytes
WBGene00021841	Y54E10BR.2	96	39.572	ENSPANG00000025599	ARFRP1	85	53.398	Papio_anubis
WBGene00021841	Y54E10BR.2	96	38.503	ENSPKIG00000006104	arfrp1	90	38.503	Paramormyrops_kingsleyae
WBGene00021841	Y54E10BR.2	96	37.433	ENSPSIG00000014774	ARFRP1	93	37.433	Pelodiscus_sinensis
WBGene00021841	Y54E10BR.2	96	39.037	ENSPMGG00000019041	arfrp1	93	39.037	Periophthalmus_magnuspinnatus
WBGene00021841	Y54E10BR.2	96	36.898	ENSPCIG00000017923	ARFRP1	93	36.898	Phascolarctos_cinereus
WBGene00021841	Y54E10BR.2	96	38.503	ENSPFOG00000003764	arfrp1	93	38.503	Poecilia_formosa
WBGene00021841	Y54E10BR.2	96	38.503	ENSPLAG00000022207	arfrp1	93	38.503	Poecilia_latipinna
WBGene00021841	Y54E10BR.2	96	38.503	ENSPMEG00000013451	arfrp1	93	38.503	Poecilia_mexicana
WBGene00021841	Y54E10BR.2	96	37.968	ENSPREG00000019667	arfrp1	93	37.968	Poecilia_reticulata
WBGene00021841	Y54E10BR.2	96	39.572	ENSPPYG00000011245	ARFRP1	93	39.572	Pongo_abelii
WBGene00021841	Y54E10BR.2	96	37.968	ENSPCAG00000001846	ARFRP1	95	37.968	Procavia_capensis
WBGene00021841	Y54E10BR.2	96	39.572	ENSPCOG00000024163	ARFRP1	85	53.398	Propithecus_coquereli
WBGene00021841	Y54E10BR.2	96	39.037	ENSPVAG00000013488	ARFRP1	93	39.037	Pteropus_vampyrus
WBGene00021841	Y54E10BR.2	96	38.503	ENSPNAG00000003438	arfrp1	93	38.503	Pygocentrus_nattereri
WBGene00021841	Y54E10BR.2	96	39.037	ENSRNOG00000013992	Arfrp1	93	39.037	Rattus_norvegicus
WBGene00021841	Y54E10BR.2	96	39.037	ENSRBIG00000044065	ARFRP1	85	53.398	Rhinopithecus_bieti
WBGene00021841	Y54E10BR.2	96	39.037	ENSRROG00000010121	ARFRP1	85	53.398	Rhinopithecus_roxellana
WBGene00021841	Y54E10BR.2	98	33.163	YPL051W	-	98	33.163	Saccharomyces_cerevisiae
WBGene00021841	Y54E10BR.2	96	39.037	ENSSBOG00000021962	ARFRP1	98	47.059	Saimiri_boliviensis_boliviensis
WBGene00021841	Y54E10BR.2	96	36.898	ENSSHAG00000017842	ARFRP1	93	36.898	Sarcophilus_harrisii
WBGene00021841	Y54E10BR.2	96	37.968	ENSSFOG00015020500	arfrp1	93	37.968	Scleropages_formosus
WBGene00021841	Y54E10BR.2	96	39.037	ENSSMAG00000001351	arfrp1	83	39.037	Scophthalmus_maximus
WBGene00021841	Y54E10BR.2	96	38.503	ENSSDUG00000007121	arfrp1	93	38.503	Seriola_dumerili
WBGene00021841	Y54E10BR.2	96	38.503	ENSSLDG00000020044	arfrp1	93	38.503	Seriola_lalandi_dorsalis
WBGene00021841	Y54E10BR.2	96	36.364	ENSSPUG00000018502	ARFRP1	93	36.364	Sphenodon_punctatus
WBGene00021841	Y54E10BR.2	96	38.503	ENSSSCG00000035304	ARFRP1	93	38.503	Sus_scrofa
WBGene00021841	Y54E10BR.2	96	38.503	ENSTGUG00000007096	ARFRP1	93	38.503	Taeniopygia_guttata
WBGene00021841	Y54E10BR.2	96	39.037	ENSTRUG00000009319	arfrp1	93	39.037	Takifugu_rubripes
WBGene00021841	Y54E10BR.2	72	45.652	ENSTNIG00000005278	arfrp1	100	45.652	Tetraodon_nigroviridis
WBGene00021841	Y54E10BR.2	96	38.503	ENSTTRG00000012222	ARFRP1	93	38.503	Tursiops_truncatus
WBGene00021841	Y54E10BR.2	89	40.462	ENSXCOG00000009364	arfrp1	88	40.462	Xiphophorus_couchianus
WBGene00021841	Y54E10BR.2	96	38.503	ENSXMAG00000002627	arfrp1	93	38.503	Xiphophorus_maculatus