EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00021843 (Gene tree)
Gene ID: -
Gene Symbol: Y54E10BR.4
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 5790 bases
Position: chrI:3015742-3021531
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y54E10BR	NOB1_Zn_bind	PF08772.11	5.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y54E10BR.4	-	1207	NM_058689	Y54E10BR.4	364 (aa)	NP_491090	Q9N3D3

Gene Model

Click here to download WBGene00021843's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021843's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021843	Y54E10BR.4	97	32.921	ENSG00000141101	NOB1	73	43.842	Homo_sapiens
WBGene00021843	Y54E10BR.4	80	34.030	ENSAPOG00000008241	nob1	56	41.872	Acanthochromis_polyacanthus
WBGene00021843	Y54E10BR.4	97	32.678	ENSAMEG00000006706	NOB1	76	41.872	Ailuropoda_melanoleuca
WBGene00021843	Y54E10BR.4	97	33.333	ENSACIG00000001503	nob1	98	32.051	Amphilophus_citrinellus
WBGene00021843	Y54E10BR.4	97	33.592	ENSAOCG00000006533	nob1	97	33.858	Amphiprion_ocellaris
WBGene00021843	Y54E10BR.4	97	34.015	ENSAPEG00000000032	-	97	34.026	Amphiprion_percula
WBGene00021843	Y54E10BR.4	97	34.015	ENSAPEG00000000029	nob1	97	34.026	Amphiprion_percula
WBGene00021843	Y54E10BR.4	92	35.083	ENSATEG00000014585	nob1	97	35.106	Anabas_testudineus
WBGene00021843	Y54E10BR.4	98	33.014	ENSACAG00000003697	NOB1	66	46.305	Anolis_carolinensis
WBGene00021843	Y54E10BR.4	97	32.178	ENSANAG00000036611	NOB1	73	40.394	Aotus_nancymaae
WBGene00021843	Y54E10BR.4	97	31.991	ENSACLG00000024897	nob1	64	42.365	Astatotilapia_calliptera
WBGene00021843	Y54E10BR.4	86	39.216	ENSAMXG00000003642	nob1	64	41.872	Astyanax_mexicanus
WBGene00021843	Y54E10BR.4	97	32.843	ENSBTAG00000020633	NOB1	75	42.857	Bos_taurus
WBGene00021843	Y54E10BR.4	97	32.187	ENSCJAG00000015230	NOB1	73	41.872	Callithrix_jacchus
WBGene00021843	Y54E10BR.4	97	31.863	ENSCAFG00000020251	NOB1	72	42.857	Canis_familiaris
WBGene00021843	Y54E10BR.4	97	31.863	ENSCAFG00020020297	NOB1	72	42.857	Canis_lupus_dingo
WBGene00021843	Y54E10BR.4	97	34.184	ENSCHIG00000027022	NOB1	78	42.857	Capra_hircus
WBGene00021843	Y54E10BR.4	52	43.216	ENSCAPG00000015542	NOB1	59	43.350	Cavia_aperea
WBGene00021843	Y54E10BR.4	78	43.216	ENSCPOG00000022538	NOB1	73	43.350	Cavia_porcellus
WBGene00021843	Y54E10BR.4	97	32.683	ENSCCAG00000023773	NOB1	72	41.872	Cebus_capucinus
WBGene00021843	Y54E10BR.4	97	32.754	ENSCATG00000039487	NOB1	73	43.350	Cercocebus_atys
WBGene00021843	Y54E10BR.4	79	35.650	ENSCLAG00000005926	NOB1	97	34.743	Chinchilla_lanigera
WBGene00021843	Y54E10BR.4	97	32.921	ENSCSAG00000004158	NOB1	73	42.857	Chlorocebus_sabaeus
WBGene00021843	Y54E10BR.4	97	32.673	ENSCHOG00000011047	NOB1	73	40.488	Choloepus_hoffmanni
WBGene00021843	Y54E10BR.4	98	33.753	ENSCPBG00000027035	NOB1	91	32.746	Chrysemys_picta_bellii
WBGene00021843	Y54E10BR.4	97	32.918	ENSCING00000023441	-	98	31.841	Ciona_intestinalis
WBGene00021843	Y54E10BR.4	96	33.251	ENSCSAVG00000009081	-	96	33.170	Ciona_savignyi
WBGene00021843	Y54E10BR.4	97	33.501	ENSCGRG00001009255	Nob1	93	34.257	Cricetulus_griseus_chok1gshd
WBGene00021843	Y54E10BR.4	97	33.501	ENSCGRG00000010869	Nob1	98	34.257	Cricetulus_griseus_crigri
WBGene00021843	Y54E10BR.4	71	47.619	ENSCSEG00000019657	nob1	60	47.333	Cynoglossus_semilaevis
WBGene00021843	Y54E10BR.4	78	41.500	ENSDARG00000016080	nob1	68	41.951	Danio_rerio
WBGene00021843	Y54E10BR.4	97	31.773	ENSDNOG00000041643	NOB1	75	41.872	Dasypus_novemcinctus
WBGene00021843	Y54E10BR.4	97	34.074	ENSDORG00000000483	Nob1	76	43.350	Dipodomys_ordii
WBGene00021843	Y54E10BR.4	98	44.954	FBgn0030177	CG2972	72	46.193	Drosophila_melanogaster
WBGene00021843	Y54E10BR.4	98	35.405	ENSEBUG00000004464	nob1	99	36.461	Eptatretus_burgeri
WBGene00021843	Y54E10BR.4	98	33.976	ENSEASG00005021356	NOB1	63	42.857	Equus_asinus_asinus
WBGene00021843	Y54E10BR.4	98	33.976	ENSECAG00000023748	NOB1	61	42.857	Equus_caballus
WBGene00021843	Y54E10BR.4	93	38.153	ENSELUG00000016199	nob1	72	40.000	Esox_lucius
WBGene00021843	Y54E10BR.4	97	33.741	ENSFCAG00000002958	NOB1	78	42.365	Felis_catus
WBGene00021843	Y54E10BR.4	61	40.984	ENSFALG00000002747	NOB1	83	42.857	Ficedula_albicollis
WBGene00021843	Y54E10BR.4	97	33.827	ENSFDAG00000009239	NOB1	76	44.390	Fukomys_damarensis
WBGene00021843	Y54E10BR.4	65	36.694	ENSFHEG00000007657	nob1	51	41.000	Fundulus_heteroclitus
WBGene00021843	Y54E10BR.4	97	32.376	ENSGMOG00000010638	nob1	97	32.898	Gadus_morhua
WBGene00021843	Y54E10BR.4	78	44.898	ENSGALG00000000693	NOB1	70	45.000	Gallus_gallus
WBGene00021843	Y54E10BR.4	83	43.500	ENSGAFG00000006104	nob1	69	43.842	Gambusia_affinis
WBGene00021843	Y54E10BR.4	92	33.075	ENSGACG00000017552	nob1	68	41.000	Gasterosteus_aculeatus
WBGene00021843	Y54E10BR.4	98	32.242	ENSGAGG00000003902	NOB1	74	42.788	Gopherus_agassizii
WBGene00021843	Y54E10BR.4	97	32.924	ENSGGOG00000025456	NOB1	73	43.842	Gorilla_gorilla
WBGene00021843	Y54E10BR.4	97	31.407	ENSHBUG00000002580	nob1	76	42.365	Haplochromis_burtoni
WBGene00021843	Y54E10BR.4	97	34.793	ENSHGLG00000014260	NOB1	75	43.415	Heterocephalus_glaber_female
WBGene00021843	Y54E10BR.4	97	34.793	ENSHGLG00100013978	NOB1	76	43.415	Heterocephalus_glaber_male
WBGene00021843	Y54E10BR.4	96	32.134	ENSHCOG00000006699	nob1	71	43.842	Hippocampus_comes
WBGene00021843	Y54E10BR.4	76	41.206	ENSIPUG00000007579	nob1	61	41.500	Ictalurus_punctatus
WBGene00021843	Y54E10BR.4	97	33.085	ENSSTOG00000001204	NOB1	76	42.857	Ictidomys_tridecemlineatus
WBGene00021843	Y54E10BR.4	97	33.416	ENSJJAG00000015543	Nob1	98	33.251	Jaculus_jaculus
WBGene00021843	Y54E10BR.4	97	31.450	ENSKMAG00000018220	nob1	75	40.887	Kryptolebias_marmoratus
WBGene00021843	Y54E10BR.4	96	32.564	ENSLBEG00000026375	nob1	63	41.206	Labrus_bergylta
WBGene00021843	Y54E10BR.4	96	44.390	ENSLACG00000006973	NOB1	68	44.724	Latimeria_chalumnae
WBGene00021843	Y54E10BR.4	76	42.211	ENSLOCG00000001411	nob1	66	42.079	Lepisosteus_oculatus
WBGene00021843	Y54E10BR.4	81	41.709	ENSLAFG00000008978	NOB1	74	41.872	Loxodonta_africana
WBGene00021843	Y54E10BR.4	97	33.251	ENSMFAG00000030131	NOB1	73	43.350	Macaca_fascicularis
WBGene00021843	Y54E10BR.4	97	32.921	ENSMMUG00000006506	NOB1	73	43.350	Macaca_mulatta
WBGene00021843	Y54E10BR.4	97	33.170	ENSMNEG00000028829	NOB1	71	37.438	Macaca_nemestrina
WBGene00021843	Y54E10BR.4	97	32.921	ENSMLEG00000032913	NOB1	73	43.350	Mandrillus_leucophaeus
WBGene00021843	Y54E10BR.4	52	42.500	ENSMZEG00005003827	-	62	42.365	Maylandia_zebra
WBGene00021843	Y54E10BR.4	97	33.247	ENSMZEG00005028346	nob1	97	33.247	Maylandia_zebra
WBGene00021843	Y54E10BR.4	51	45.178	ENSMGAG00000008675	NOB1	74	45.000	Meleagris_gallopavo
WBGene00021843	Y54E10BR.4	97	32.412	ENSMAUG00000013554	Nob1	76	40.000	Mesocricetus_auratus
WBGene00021843	Y54E10BR.4	97	32.518	ENSMICG00000012123	NOB1	75	42.857	Microcebus_murinus
WBGene00021843	Y54E10BR.4	97	34.250	ENSMOCG00000010370	Nob1	76	43.350	Microtus_ochrogaster
WBGene00021843	Y54E10BR.4	97	32.000	ENSMMOG00000002120	nob1	75	40.394	Mola_mola
WBGene00021843	Y54E10BR.4	98	31.905	ENSMODG00000002677	NOB1	76	43.204	Monodelphis_domestica
WBGene00021843	Y54E10BR.4	98	34.545	ENSMALG00000014580	nob1	99	34.286	Monopterus_albus
WBGene00021843	Y54E10BR.4	99	32.524	MGP_CAROLIEiJ_G0031536	Nob1	77	42.365	Mus_caroli
WBGene00021843	Y54E10BR.4	97	32.750	ENSMUSG00000003848	Nob1	78	42.857	Mus_musculus
WBGene00021843	Y54E10BR.4	97	32.587	MGP_PahariEiJ_G0023136	Nob1	74	41.872	Mus_pahari
WBGene00021843	Y54E10BR.4	99	32.524	MGP_SPRETEiJ_G0032654	Nob1	76	42.857	Mus_spretus
WBGene00021843	Y54E10BR.4	80	41.709	ENSMPUG00000007483	NOB1	68	41.872	Mustela_putorius_furo
WBGene00021843	Y54E10BR.4	97	33.580	ENSMLUG00000006667	NOB1	76	42.857	Myotis_lucifugus
WBGene00021843	Y54E10BR.4	97	33.920	ENSNGAG00000008627	Nob1	50	42.857	Nannospalax_galili
WBGene00021843	Y54E10BR.4	97	32.187	ENSNLEG00000005572	NOB1	73	42.365	Nomascus_leucogenys
WBGene00021843	Y54E10BR.4	83	42.000	ENSONIG00000003319	nob1	70	41.872	Oreochromis_niloticus
WBGene00021843	Y54E10BR.4	97	32.234	ENSORLG00000018862	nob1	74	40.394	Oryzias_latipes
WBGene00021843	Y54E10BR.4	97	32.143	ENSORLG00020014687	nob1	74	40.887	Oryzias_latipes_hni
WBGene00021843	Y54E10BR.4	97	33.590	ENSORLG00015012156	nob1	65	40.887	Oryzias_latipes_hsok
WBGene00021843	Y54E10BR.4	78	42.500	ENSOMEG00000022722	nob1	65	42.365	Oryzias_melastigma
WBGene00021843	Y54E10BR.4	84	36.765	ENSOGAG00000004590	NOB1	76	37.438	Otolemur_garnettii
WBGene00021843	Y54E10BR.4	97	32.921	ENSOARG00000003606	NOB1	75	42.365	Ovis_aries
WBGene00021843	Y54E10BR.4	97	32.673	ENSPPAG00000040257	NOB1	73	43.350	Pan_paniscus
WBGene00021843	Y54E10BR.4	94	30.534	ENSPPAG00000003317	-	74	38.916	Pan_paniscus
WBGene00021843	Y54E10BR.4	85	41.709	ENSPPRG00000016949	NOB1	78	41.872	Panthera_pardus
WBGene00021843	Y54E10BR.4	85	42.211	ENSPTIG00000011234	NOB1	78	42.365	Panthera_tigris_altaica
WBGene00021843	Y54E10BR.4	97	32.673	ENSPTRG00000008285	NOB1	73	43.350	Pan_troglodytes
WBGene00021843	Y54E10BR.4	97	32.921	ENSPANG00000015858	NOB1	73	43.350	Papio_anubis
WBGene00021843	Y54E10BR.4	78	42.211	ENSPKIG00000020293	nob1	71	42.365	Paramormyrops_kingsleyae
WBGene00021843	Y54E10BR.4	90	31.633	ENSPSIG00000012477	NOB1	68	42.857	Pelodiscus_sinensis
WBGene00021843	Y54E10BR.4	97	35.185	ENSPMGG00000023476	nob1	97	34.584	Periophthalmus_magnuspinnatus
WBGene00021843	Y54E10BR.4	97	32.446	ENSPEMG00000010995	Nob1	76	43.350	Peromyscus_maniculatus_bairdii
WBGene00021843	Y54E10BR.4	52	42.714	ENSPCIG00000007274	-	80	43.627	Phascolarctos_cinereus
WBGene00021843	Y54E10BR.4	52	42.500	ENSPFOG00000000027	nob1	56	42.857	Poecilia_formosa
WBGene00021843	Y54E10BR.4	52	42.500	ENSPLAG00000011546	nob1	72	42.857	Poecilia_latipinna
WBGene00021843	Y54E10BR.4	97	34.937	ENSPMEG00000023435	nob1	75	43.350	Poecilia_mexicana
WBGene00021843	Y54E10BR.4	83	42.500	ENSPREG00000007675	nob1	69	42.857	Poecilia_reticulata
WBGene00021843	Y54E10BR.4	97	33.002	ENSPPYG00000007509	NOB1	73	43.842	Pongo_abelii
WBGene00021843	Y54E10BR.4	97	32.108	ENSPCAG00000001527	NOB1	72	42.365	Procavia_capensis
WBGene00021843	Y54E10BR.4	81	41.709	ENSPCOG00000025515	NOB1	76	41.872	Propithecus_coquereli
WBGene00021843	Y54E10BR.4	97	33.967	ENSPNYG00000018449	nob1	97	33.967	Pundamilia_nyererei
WBGene00021843	Y54E10BR.4	79	42.439	ENSPNAG00000004244	nob1	68	42.584	Pygocentrus_nattereri
WBGene00021843	Y54E10BR.4	97	33.663	ENSRBIG00000019599	NOB1	73	42.365	Rhinopithecus_bieti
WBGene00021843	Y54E10BR.4	97	33.663	ENSRROG00000033419	NOB1	73	42.365	Rhinopithecus_roxellana
WBGene00021843	Y54E10BR.4	80	33.141	ENSSBOG00000029042	NOB1	52	41.872	Saimiri_boliviensis_boliviensis
WBGene00021843	Y54E10BR.4	97	33.333	ENSSHAG00000015387	NOB1	74	45.588	Sarcophilus_harrisii
WBGene00021843	Y54E10BR.4	97	33.000	ENSSMAG00000003064	nob1	73	41.379	Scophthalmus_maximus
WBGene00021843	Y54E10BR.4	94	37.657	ENSSDUG00000007307	nob1	97	32.346	Seriola_dumerili
WBGene00021843	Y54E10BR.4	79	33.140	ENSSPUG00000005621	NOB1	58	41.872	Sphenodon_punctatus
WBGene00021843	Y54E10BR.4	98	32.750	ENSSPAG00000022362	nob1	77	40.385	Stegastes_partitus
WBGene00021843	Y54E10BR.4	51	43.204	ENSTGUG00000008124	NOB1	91	43.062	Taeniopygia_guttata
WBGene00021843	Y54E10BR.4	94	36.576	ENSTRUG00000004780	nob1	69	38.916	Takifugu_rubripes
WBGene00021843	Y54E10BR.4	94	36.576	ENSTRUG00000023145	nob1	69	38.916	Takifugu_rubripes
WBGene00021843	Y54E10BR.4	98	31.951	ENSTNIG00000002552	nob1	73	40.580	Tetraodon_nigroviridis
WBGene00021843	Y54E10BR.4	52	42.211	ENSUAMG00000028135	NOB1	79	42.365	Ursus_americanus
WBGene00021843	Y54E10BR.4	80	42.211	ENSUMAG00000018658	NOB1	70	42.365	Ursus_maritimus
WBGene00021843	Y54E10BR.4	97	32.108	ENSVVUG00000017271	NOB1	77	42.857	Vulpes_vulpes
WBGene00021843	Y54E10BR.4	68	38.521	ENSXETG00000017874	nob1	69	41.346	Xenopus_tropicalis
WBGene00021843	Y54E10BR.4	80	36.164	ENSXCOG00000009734	nob1	64	43.842	Xiphophorus_couchianus
WBGene00021843	Y54E10BR.4	97	34.321	ENSXMAG00000017371	nob1	73	43.350	Xiphophorus_maculatus