EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00021845 (Gene tree)
Gene ID: -
Gene Symbol: rpb-7
Alias: -
Full Name: RNA Polymerase II (B) subunit
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1727 bases
Position: chrI:3031212-3032938
Accession: Q9N3C9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y54E10BR	S1	PF00575.23	4.9e-16	1	1
Y54E10BR	SHS2_Rpb7-N	PF03876.17	8.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y54E10BR.6	-	720	NM_058692	Y54E10BR.6	197 (aa)	NP_491093	Q9N3C9

Gene Model

Click here to download WBGene00021845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021845's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021845	rpb-7	87	76.744	ENSG00000168002	POLR2G	100	76.744	Homo_sapiens
WBGene00021845	rpb-7	86	76.331	ENSAPOG00000010949	polr2gl	99	76.331	Acanthochromis_polyacanthus
WBGene00021845	rpb-7	87	76.744	ENSAMEG00000006386	POLR2G	100	76.744	Ailuropoda_melanoleuca
WBGene00021845	rpb-7	86	76.331	ENSACIG00000007252	polr2gl	88	76.331	Amphilophus_citrinellus
WBGene00021845	rpb-7	87	76.744	ENSAOCG00000013628	polr2gl	100	76.744	Amphiprion_ocellaris
WBGene00021845	rpb-7	87	76.744	ENSAPEG00000011229	polr2gl	100	76.744	Amphiprion_percula
WBGene00021845	rpb-7	87	76.744	ENSATEG00000013382	polr2gl	100	76.744	Anabas_testudineus
WBGene00021845	rpb-7	85	77.246	ENSACAG00000001005	POLR2G	97	77.246	Anolis_carolinensis
WBGene00021845	rpb-7	87	76.744	ENSANAG00000037428	POLR2G	100	76.744	Aotus_nancymaae
WBGene00021845	rpb-7	87	75.581	ENSACLG00000014753	polr2gl	100	75.581	Astatotilapia_calliptera
WBGene00021845	rpb-7	87	76.744	ENSAMXG00000030439	polr2gl	100	76.744	Astyanax_mexicanus
WBGene00021845	rpb-7	87	76.744	ENSBTAG00000009483	POLR2G	100	76.744	Bos_taurus
WBGene00021845	rpb-7	87	76.744	ENSCJAG00000018688	POLR2G	100	76.744	Callithrix_jacchus
WBGene00021845	rpb-7	87	76.744	ENSCAFG00020013136	POLR2G	100	76.744	Canis_lupus_dingo
WBGene00021845	rpb-7	88	76.879	ENSCHIG00000023730	POLR2G	92	76.879	Capra_hircus
WBGene00021845	rpb-7	87	76.163	ENSTSYG00000011918	POLR2G	100	76.163	Carlito_syrichta
WBGene00021845	rpb-7	66	77.863	ENSCAPG00000017572	POLR2G	100	77.863	Cavia_aperea
WBGene00021845	rpb-7	87	76.744	ENSCPOG00000036420	POLR2G	100	76.744	Cavia_porcellus
WBGene00021845	rpb-7	86	69.822	ENSCCAG00000033483	-	93	69.822	Cebus_capucinus
WBGene00021845	rpb-7	87	76.744	ENSCATG00000034443	POLR2G	100	76.744	Cercocebus_atys
WBGene00021845	rpb-7	87	76.744	ENSCLAG00000000802	POLR2G	100	76.744	Chinchilla_lanigera
WBGene00021845	rpb-7	87	76.744	ENSCSAG00000006715	POLR2G	100	76.744	Chlorocebus_sabaeus
WBGene00021845	rpb-7	68	78.947	ENSCHOG00000009928	POLR2G	100	78.947	Choloepus_hoffmanni
WBGene00021845	rpb-7	87	76.744	ENSCPBG00000017972	POLR2G	100	76.744	Chrysemys_picta_bellii
WBGene00021845	rpb-7	86	77.647	ENSCING00000004991	-	99	77.647	Ciona_intestinalis
WBGene00021845	rpb-7	86	77.515	ENSCSAVG00000002667	-	98	77.515	Ciona_savignyi
WBGene00021845	rpb-7	87	77.193	ENSCANG00000043203	POLR2G	100	76.744	Colobus_angolensis_palliatus
WBGene00021845	rpb-7	87	76.744	ENSCGRG00001022692	-	100	76.744	Cricetulus_griseus_chok1gshd
WBGene00021845	rpb-7	86	71.765	ENSCGRG00001011370	-	99	71.765	Cricetulus_griseus_chok1gshd
WBGene00021845	rpb-7	87	76.744	ENSCGRG00000015350	Polr2g	100	76.744	Cricetulus_griseus_crigri
WBGene00021845	rpb-7	85	77.381	ENSCSEG00000011991	polr2gl	90	77.381	Cynoglossus_semilaevis
WBGene00021845	rpb-7	87	76.744	ENSCVAG00000021090	polr2gl	100	76.744	Cyprinodon_variegatus
WBGene00021845	rpb-7	87	76.744	ENSDARG00000056127	polr2gl	100	76.744	Danio_rerio
WBGene00021845	rpb-7	87	76.744	ENSDNOG00000043426	POLR2G	100	76.744	Dasypus_novemcinctus
WBGene00021845	rpb-7	86	48.824	ENSDORG00000015696	-	98	47.647	Dipodomys_ordii
WBGene00021845	rpb-7	87	73.837	ENSDORG00000010351	-	100	73.837	Dipodomys_ordii
WBGene00021845	rpb-7	86	71.176	FBgn0051155	Rpb7	98	71.176	Drosophila_melanogaster
WBGene00021845	rpb-7	86	62.353	ENSETEG00000019637	POLR2G	99	62.353	Echinops_telfairi
WBGene00021845	rpb-7	87	76.163	ENSEBUG00000000439	-	86	76.163	Eptatretus_burgeri
WBGene00021845	rpb-7	87	76.744	ENSEASG00005011357	POLR2G	100	76.744	Equus_asinus_asinus
WBGene00021845	rpb-7	87	77.193	ENSECAG00000021465	POLR2G	88	77.193	Equus_caballus
WBGene00021845	rpb-7	86	49.412	ENSEEUG00000007416	POLR2G	99	49.412	Erinaceus_europaeus
WBGene00021845	rpb-7	87	76.744	ENSELUG00000003401	polr2g	100	76.744	Esox_lucius
WBGene00021845	rpb-7	87	77.193	ENSFCAG00000026072	POLR2G	62	77.193	Felis_catus
WBGene00021845	rpb-7	87	76.744	ENSFDAG00000020977	POLR2G	100	76.744	Fukomys_damarensis
WBGene00021845	rpb-7	87	76.163	ENSFHEG00000003053	polr2gl	100	76.163	Fundulus_heteroclitus
WBGene00021845	rpb-7	83	77.439	ENSGMOG00000000535	polr2gl	100	77.439	Gadus_morhua
WBGene00021845	rpb-7	83	76.220	ENSGAFG00000001773	polr2gl	98	76.220	Gambusia_affinis
WBGene00021845	rpb-7	87	76.744	ENSGACG00000017706	polr2gl	100	76.744	Gasterosteus_aculeatus
WBGene00021845	rpb-7	85	76.786	ENSGAGG00000001303	POLR2G	100	76.786	Gopherus_agassizii
WBGene00021845	rpb-7	87	76.744	ENSGGOG00000011739	POLR2G	100	76.744	Gorilla_gorilla
WBGene00021845	rpb-7	86	75.148	ENSHBUG00000011421	polr2gl	93	75.148	Haplochromis_burtoni
WBGene00021845	rpb-7	87	76.744	ENSHGLG00000004851	POLR2G	100	76.744	Heterocephalus_glaber_female
WBGene00021845	rpb-7	87	73.256	ENSHGLG00100018441	POLR2G	100	73.256	Heterocephalus_glaber_male
WBGene00021845	rpb-7	87	76.744	ENSHCOG00000009499	polr2gl	91	76.744	Hippocampus_comes
WBGene00021845	rpb-7	87	76.744	ENSIPUG00000000671	polr2g	100	76.744	Ictalurus_punctatus
WBGene00021845	rpb-7	87	75.581	ENSSTOG00000004391	POLR2G	100	75.581	Ictidomys_tridecemlineatus
WBGene00021845	rpb-7	87	76.744	ENSJJAG00000005019	Polr2g	100	76.744	Jaculus_jaculus
WBGene00021845	rpb-7	86	77.515	ENSKMAG00000011056	polr2gl	89	77.844	Kryptolebias_marmoratus
WBGene00021845	rpb-7	87	76.744	ENSLBEG00000001458	polr2gl	100	76.744	Labrus_bergylta
WBGene00021845	rpb-7	87	76.163	ENSLACG00000006420	POLR2G	100	76.163	Latimeria_chalumnae
WBGene00021845	rpb-7	87	76.744	ENSLAFG00000004354	POLR2G	100	76.744	Loxodonta_africana
WBGene00021845	rpb-7	87	76.744	ENSMFAG00000033674	POLR2G	100	76.744	Macaca_fascicularis
WBGene00021845	rpb-7	87	76.744	ENSMMUG00000014368	POLR2G	100	76.744	Macaca_mulatta
WBGene00021845	rpb-7	87	76.744	ENSMNEG00000041523	POLR2G	100	76.744	Macaca_nemestrina
WBGene00021845	rpb-7	87	76.744	ENSMLEG00000032928	POLR2G	100	76.744	Mandrillus_leucophaeus
WBGene00021845	rpb-7	83	76.829	ENSMAMG00000001188	polr2gl	100	76.829	Mastacembelus_armatus
WBGene00021845	rpb-7	87	75.581	ENSMZEG00005003618	polr2gl	100	75.581	Maylandia_zebra
WBGene00021845	rpb-7	87	76.744	ENSMICG00000009967	POLR2G	100	76.744	Microcebus_murinus
WBGene00021845	rpb-7	86	74.118	ENSMOCG00000010638	Polr2g	98	74.118	Microtus_ochrogaster
WBGene00021845	rpb-7	86	77.515	ENSMMOG00000003102	polr2gl	93	77.515	Mola_mola
WBGene00021845	rpb-7	86	77.515	ENSMODG00000007984	POLR2G	98	77.515	Monodelphis_domestica
WBGene00021845	rpb-7	87	76.744	ENSMALG00000013385	polr2gl	100	76.744	Monopterus_albus
WBGene00021845	rpb-7	87	76.744	MGP_CAROLIEiJ_G0022653	Polr2g	100	76.744	Mus_caroli
WBGene00021845	rpb-7	87	76.744	ENSMUSG00000071662	Polr2g	100	76.744	Mus_musculus
WBGene00021845	rpb-7	87	76.744	MGP_PahariEiJ_G0014148	Polr2g	100	76.744	Mus_pahari
WBGene00021845	rpb-7	87	76.744	MGP_SPRETEiJ_G0023566	Polr2g	100	76.744	Mus_spretus
WBGene00021845	rpb-7	87	76.744	ENSMPUG00000013667	POLR2G	100	76.744	Mustela_putorius_furo
WBGene00021845	rpb-7	87	76.744	ENSMLUG00000011039	-	100	76.744	Myotis_lucifugus
WBGene00021845	rpb-7	86	77.059	ENSMLUG00000003971	-	99	77.059	Myotis_lucifugus
WBGene00021845	rpb-7	87	76.744	ENSNGAG00000020624	Polr2g	100	76.744	Nannospalax_galili
WBGene00021845	rpb-7	81	75.000	ENSNBRG00000003949	polr2gl	99	75.000	Neolamprologus_brichardi
WBGene00021845	rpb-7	66	77.863	ENSNLEG00000004097	-	73	77.863	Nomascus_leucogenys
WBGene00021845	rpb-7	85	77.381	ENSMEUG00000011547	POLR2G	100	77.381	Notamacropus_eugenii
WBGene00021845	rpb-7	86	61.765	ENSOPRG00000014769	POLR2G	99	61.765	Ochotona_princeps
WBGene00021845	rpb-7	79	71.795	ENSODEG00000018495	-	100	71.795	Octodon_degus
WBGene00021845	rpb-7	87	56.977	ENSODEG00000005609	-	100	56.977	Octodon_degus
WBGene00021845	rpb-7	87	76.744	ENSODEG00000002048	-	100	76.744	Octodon_degus
WBGene00021845	rpb-7	87	76.744	ENSONIG00000005183	polr2gl	100	76.744	Oreochromis_niloticus
WBGene00021845	rpb-7	87	76.744	ENSOANG00000005808	POLR2G	100	76.744	Ornithorhynchus_anatinus
WBGene00021845	rpb-7	87	76.744	ENSOCUG00000009485	POLR2G	100	76.744	Oryctolagus_cuniculus
WBGene00021845	rpb-7	87	76.744	ENSORLG00000003154	polr2gl	100	76.744	Oryzias_latipes
WBGene00021845	rpb-7	86	76.331	ENSORLG00020017682	polr2gl	99	76.331	Oryzias_latipes_hni
WBGene00021845	rpb-7	87	76.744	ENSORLG00015018537	polr2gl	100	76.744	Oryzias_latipes_hsok
WBGene00021845	rpb-7	87	76.744	ENSOMEG00000020086	polr2gl	100	76.744	Oryzias_melastigma
WBGene00021845	rpb-7	87	64.205	ENSOGAG00000032720	POLR2G	100	64.205	Otolemur_garnettii
WBGene00021845	rpb-7	85	76.331	ENSOARG00000016984	POLR2G	80	76.331	Ovis_aries
WBGene00021845	rpb-7	87	76.744	ENSPPAG00000039868	POLR2G	100	76.744	Pan_paniscus
WBGene00021845	rpb-7	87	76.744	ENSPPRG00000005669	POLR2G	100	76.744	Panthera_pardus
WBGene00021845	rpb-7	87	74.286	ENSPTIG00000015781	POLR2G	100	74.286	Panthera_tigris_altaica
WBGene00021845	rpb-7	87	76.744	ENSPANG00000025888	POLR2G	100	76.744	Papio_anubis
WBGene00021845	rpb-7	86	77.515	ENSPKIG00000000902	polr2gl	89	77.246	Paramormyrops_kingsleyae
WBGene00021845	rpb-7	88	76.301	ENSPSIG00000004285	POLR2G	82	76.301	Pelodiscus_sinensis
WBGene00021845	rpb-7	87	76.744	ENSPMGG00000008462	polr2gl	100	76.744	Periophthalmus_magnuspinnatus
WBGene00021845	rpb-7	87	76.744	ENSPEMG00000000685	Polr2g	100	76.744	Peromyscus_maniculatus_bairdii
WBGene00021845	rpb-7	87	76.744	ENSPCIG00000015245	-	100	76.744	Phascolarctos_cinereus
WBGene00021845	rpb-7	87	76.608	ENSPLAG00000022848	polr2gl	97	76.608	Poecilia_latipinna
WBGene00021845	rpb-7	87	76.163	ENSPMEG00000009317	polr2gl	100	76.163	Poecilia_mexicana
WBGene00021845	rpb-7	87	76.163	ENSPREG00000016633	polr2gl	100	76.163	Poecilia_reticulata
WBGene00021845	rpb-7	87	67.429	ENSPPYG00000003147	POLR2G	100	67.429	Pongo_abelii
WBGene00021845	rpb-7	87	76.744	ENSPCAG00000016408	POLR2G	100	76.744	Procavia_capensis
WBGene00021845	rpb-7	87	76.744	ENSPCOG00000024131	POLR2G	100	76.744	Propithecus_coquereli
WBGene00021845	rpb-7	87	76.163	ENSPVAG00000003481	POLR2G	100	76.163	Pteropus_vampyrus
WBGene00021845	rpb-7	87	75.581	ENSPNYG00000016136	polr2gl	100	75.581	Pundamilia_nyererei
WBGene00021845	rpb-7	87	76.744	ENSPNAG00000025210	polr2gl	100	76.744	Pygocentrus_nattereri
WBGene00021845	rpb-7	87	76.744	ENSRNOG00000019439	Polr2g	100	76.744	Rattus_norvegicus
WBGene00021845	rpb-7	87	76.744	ENSRBIG00000009173	POLR2G	100	76.744	Rhinopithecus_bieti
WBGene00021845	rpb-7	85	77.246	ENSRROG00000033543	POLR2G	73	74.306	Rhinopithecus_roxellana
WBGene00021845	rpb-7	86	39.181	YDR404C	RPB7	99	39.181	Saccharomyces_cerevisiae
WBGene00021845	rpb-7	87	77.193	ENSSBOG00000015220	POLR2G	100	76.744	Saimiri_boliviensis_boliviensis
WBGene00021845	rpb-7	87	76.744	ENSSHAG00000006006	POLR2G	100	76.744	Sarcophilus_harrisii
WBGene00021845	rpb-7	87	76.744	ENSSFOG00015001245	polr2g	100	76.744	Scleropages_formosus
WBGene00021845	rpb-7	93	72.678	ENSSMAG00000001197	polr2gl	100	76.744	Scophthalmus_maximus
WBGene00021845	rpb-7	87	76.744	ENSSDUG00000015179	polr2gl	100	76.744	Seriola_dumerili
WBGene00021845	rpb-7	87	76.744	ENSSLDG00000001822	polr2gl	100	76.744	Seriola_lalandi_dorsalis
WBGene00021845	rpb-7	87	76.744	ENSSPUG00000008614	POLR2G	100	76.744	Sphenodon_punctatus
WBGene00021845	rpb-7	86	77.515	ENSSPAG00000015276	polr2gl	99	77.515	Stegastes_partitus
WBGene00021845	rpb-7	87	76.744	ENSSSCG00000025571	POLR2G	100	76.744	Sus_scrofa
WBGene00021845	rpb-7	68	78.947	ENSTGUG00000014456	POLR2G	100	78.947	Taeniopygia_guttata
WBGene00021845	rpb-7	87	76.744	ENSTRUG00000002492	polr2gl	100	76.744	Takifugu_rubripes
WBGene00021845	rpb-7	87	63.953	ENSTBEG00000015752	POLR2G	100	63.953	Tupaia_belangeri
WBGene00021845	rpb-7	87	76.744	ENSTTRG00000002478	POLR2G	100	76.744	Tursiops_truncatus
WBGene00021845	rpb-7	87	76.744	ENSUAMG00000025968	POLR2G	100	76.744	Ursus_americanus
WBGene00021845	rpb-7	56	80.180	ENSUMAG00000014537	POLR2G	66	80.180	Ursus_maritimus
WBGene00021845	rpb-7	66	73.846	ENSVPAG00000009534	POLR2G	100	73.846	Vicugna_pacos
WBGene00021845	rpb-7	87	76.744	ENSVVUG00000029844	POLR2G	100	76.744	Vulpes_vulpes
WBGene00021845	rpb-7	87	76.744	ENSXETG00000006022	polr2g	100	76.744	Xenopus_tropicalis
WBGene00021845	rpb-7	87	76.608	ENSXCOG00000002005	polr2gl	94	76.608	Xiphophorus_couchianus
WBGene00021845	rpb-7	87	76.608	ENSXMAG00000010063	polr2gl	94	76.730	Xiphophorus_maculatus